Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01023198001 Vitis vinifera HOM05D005881 ORTHO05D007298 6.4e-41 170.2 82 100.0
Sc07g0003630 Simmondsia chinensis HOM05D005881 ORTHO05D007298 9.3e-32 139.8 78 80.8
AUR62022918 Chenopodium quinoa HOM05D005881 ORTHO05D007298 1.6e-31 139.0 77 80.5
Haze_07862 Corylus avellana HOM05D005881 ORTHO05D007298 1.6e-31 139.0 81 76.5
Cfa026039 Carpinus fangiana HOM05D005881 ORTHO05D007298 6.0e-31 137.1 81 75.3
Thecc.02G037800 Theobroma cacao HOM05D005881 ORTHO05D007298 6.0e-31 137.1 78 79.5
Ah.00g001370 Amaranthus hybridus HOM05D005881 ORTHO05D007298 1.0e-30 136.3 77 79.2
Cc02_g34860 Coffea canephora HOM05D005881 ORTHO05D007298 1.0e-30 136.3 78 76.9
Oeu010217.3 Olea europaea HOM05D005881 ORTHO05D007298 1.0e-30 136.3 78 76.9
Haze_12831 Corylus avellana HOM05D005881 ORTHO05D007298 1.7e-30 135.6 81 75.3
HanXRQChr17g0543881 Helianthus annuus HOM05D005881 ORTHO05D007298 1.7e-30 135.6 77 77.9
Prupe.1G582900 Prunus persica HOM05D005881 ORTHO05D007298 1.7e-30 135.6 77 80.5
Duzib052G1237 Durio zibethinus HOM05D005881 ORTHO05D007298 2.3e-30 135.2 82 75.6
PGR042G2514 Punica granatum HOM05D005881 ORTHO05D007298 2.3e-30 135.2 78 79.5
Solyc01g103190.3 Solanum lycopersicum HOM05D005881 ORTHO05D007298 2.3e-30 135.2 78 74.4
Sopen01g045620 Solanum pennellii HOM05D005881 ORTHO05D007298 2.3e-30 135.2 78 74.4
CiPaw.06G026000 Carya illinoinensis HOM05D005881 ORTHO05D007298 3.0e-30 134.8 80 73.8
MBI06_g43454_MAGBIO Magnolia biondii HOM05D005881 ORTHO05D007298 3.0e-30 134.8 78 76.9
CANSAT54G2245 Cannabis sativa HOM05D005881 ORTHO05D007298 3.9e-30 134.4 78 75.6
CAN.G855.36 Capsicum annuum HOM05D005881 ORTHO05D007298 3.9e-30 134.4 78 74.4
Oeu003780.1 Olea europaea HOM05D005881 ORTHO05D007298 3.9e-30 134.4 78 75.6
Ciclev10002996m.g Citrus clementina HOM05D005881 ORTHO05D007298 6.6e-30 133.7 78 75.6
Eucgr.K01416 Eucalyptus grandis HOM05D005881 ORTHO05D007298 6.6e-30 133.7 78 75.6
Hma1.2p1_0052F.1_g029890 Hydrangea macrophylla HOM05D005881 ORTHO05D007298 6.6e-30 133.7 78 76.9
PSO017G1314 Papaver somniferum HOM05D005881 ORTHO05D007298 6.6e-30 133.7 78 78.2
Peaxi162Scf00450g00736 Petunia axillaris HOM05D005881 ORTHO05D007298 6.6e-30 133.7 78 74.4
Potri.004G227500 Populus trichocarpa HOM05D005881 ORTHO05D007298 6.6e-30 133.7 79 75.9
vmacro19838 Vaccinium macrocarpon HOM05D005881 ORTHO05D007298 6.6e-30 133.7 78 78.2
Sopen01g045600 Solanum pennellii HOM05D005881 ORTHO05D007298 8.7e-30 133.3 78 73.1
Aqoxy1G00234 Aquilegia oxysepala HOM05D005881 ORTHO05D007298 1.1e-29 132.9 78 76.9
arahy.Tifrunner.gnm1.ann1.8HB0N1 Arachis hypogaea HOM05D005881 ORTHO05D007298 1.1e-29 132.9 81 72.8
Gohir.1Z049413 Gossypium hirsutum HOM05D005881 ORTHO05D007298 1.1e-29 132.9 82 74.4
Gohir.1Z049621 Gossypium hirsutum HOM05D005881 ORTHO05D007298 1.1e-29 132.9 82 74.4
MD17G1268300 Malus domestica HOM05D005881 ORTHO05D007298 1.1e-29 132.9 78 76.9
Nitab4.5_0001057g0140 Nicotiana tabacum HOM05D005881 ORTHO05D007298 1.1e-29 132.9 77 74.0
arahy.Tifrunner.gnm1.ann1.6Q1IVA Arachis hypogaea HOM05D005881 ORTHO05D007298 1.5e-29 132.5 81 72.8
arahy.Tifrunner.gnm1.ann1.GZL8T6 Arachis hypogaea HOM05D005881 ORTHO05D007298 1.5e-29 132.5 81 72.8
CDE08G1319 Ceratophyllum demersum HOM05D005881 ORTHO05D007298 1.5e-29 132.5 75 77.3
Gohir.D10G000200 Gossypium hirsutum HOM05D005881 ORTHO05D007298 1.5e-29 132.5 82 73.2
PSO170G3105 Papaver somniferum HOM05D005881 ORTHO05D007298 1.5e-29 132.5 78 76.9
THA.LOC104812459 Tarenaya hassleriana HOM05D005881 ORTHO05D007298 1.5e-29 132.5 78 75.6
EL10Ac2g04867 Beta vulgaris HOM05D005881 ORTHO05D007298 1.9e-29 132.1 77 77.9
THA.LOC104812941 Tarenaya hassleriana HOM05D005881 ORTHO05D007298 1.9e-29 132.1 78 74.4
Lsat_1_v5_gn_9_121521 Lactuca sativa HOM05D005881 ORTHO05D007298 2.5e-29 131.7 77 76.6
MD09G1270200 Malus domestica HOM05D005881 ORTHO05D007298 2.5e-29 131.7 78 75.6
PSO407G0212 Papaver somniferum HOM05D005881 ORTHO05D007298 2.5e-29 131.7 77 76.6
Sed0016149 Sechium edule HOM05D005881 ORTHO05D007298 2.5e-29 131.7 77 77.9
Gohir.A01G000500 Gossypium hirsutum HOM05D005881 ORTHO05D007298 3.3e-29 131.3 82 73.2
Atru.chr6.354 Acer truncatum HOM05D005881 ORTHO05D007298 4.3e-29 131.0 78 74.4
ECA246G1780 Erigeron canadensis HOM05D005881 ORTHO05D007298 4.3e-29 131.0 81 74.1
Migut.O00861 Erythranthe guttata HOM05D005881 ORTHO05D007298 4.3e-29 131.0 78 74.4
Gorai.002G000700 Gossypium raimondii HOM05D005881 ORTHO05D007298 4.3e-29 131.0 82 73.2
Manes.10G110680 Manihot esculenta HOM05D005881 ORTHO05D007298 4.3e-29 131.0 78 74.4
Nn2g11943 Nelumbo nucifera HOM05D005881 ORTHO05D007298 4.3e-29 131.0 78 75.6
TAR623G1668 Trochodendron aralioides HOM05D005881 ORTHO05D007298 4.3e-29 131.0 78 74.4
Lj6g0001713 Lotus japonicus HOM05D005881 ORTHO05D007298 1.3e-28 129.4 77 75.3
RcHm_v2.0_Chr7g0222581 Rosa chinensis HOM05D005881 ORTHO05D007298 1.3e-28 129.4 78 75.6
Aa31LG6G3200 Aethionema arabicum HOM05D005881 ORTHO05D007298 1.6e-28 129.0 78 74.4
ClCG10G007340 Citrullus lanatus HOM05D005881 ORTHO05D007298 1.6e-28 129.0 77 75.3
QL02p102397 Quercus lobata HOM05D005881 ORTHO05D007298 2.1e-28 128.6 81 70.4
CSS0041173 Camellia sinensis var. sinensis HOM05D005881 ORTHO05D007298 2.8e-28 128.3 75 74.7
DCAR_001713 Daucus carota HOM05D005881 ORTHO05D007298 2.8e-28 128.3 75 74.7
Migut.N00857 Erythranthe guttata HOM05D005881 ORTHO05D007298 2.8e-28 128.3 78 73.1
QL02p103034 Quercus lobata HOM05D005881 ORTHO05D007298 2.8e-28 128.3 81 70.4
Lalb_Chr18g0053871 Lupinus albus HOM05D005881 ORTHO05D007298 3.6e-28 127.9 77 72.7
Manes.07G028000 Manihot esculenta HOM05D005881 ORTHO05D007298 3.6e-28 127.9 78 73.1
Os02g0560450 Oryza sativa ssp. japonica HOM05D005881 ORTHO05D007298 4.8e-28 127.5 78 73.1
AL3G11760 Arabidopsis lyrata HOM05D005881 ORTHO05D007298 6.2e-28 127.1 79 75.9
AT4G21192 Arabidopsis thaliana HOM05D005881 ORTHO05D007298 6.2e-28 127.1 79 75.9
Glyma.11G208400 Glycine max HOM05D005881 ORTHO05D007298 6.2e-28 127.1 77 72.7
Glyma.18G045400 Glycine max HOM05D005881 ORTHO05D007298 6.2e-28 127.1 77 72.7
Carub.0007s2023 Capsella rubella HOM05D005881 ORTHO05D007298 8.1e-28 126.7 79 74.7
Medtr3g064240 Medicago truncatula HOM05D005881 ORTHO05D007298 8.1e-28 126.7 77 74.0
arahy.Tifrunner.gnm1.ann1.VTJ29R Arachis hypogaea HOM05D005881 ORTHO05D007298 1.1e-27 126.3 86 68.6
AL7G32920 Arabidopsis lyrata HOM05D005881 ORTHO05D007298 1.4e-27 125.9 79 74.7
TWI79G0203 Tripterygium wilfordii HOM05D005881 ORTHO05D007298 1.8e-27 125.6 78 69.2
FvH4_5g29590 Fragaria vesca HOM05D005881 ORTHO05D007298 2.4e-27 125.2 77 72.7
Gohir.1Z049575 Gossypium hirsutum HOM05D005881 ORTHO05D007298 5.3e-27 124.0 82 72.0
Gorai.002G000900 Gossypium raimondii HOM05D005881 ORTHO05D007298 5.3e-27 124.0 82 72.0
TPR.G37331 Trifolium pratense HOM05D005881 ORTHO05D007298 5.3e-27 124.0 77 72.7
C03p83470 Brassica napus HOM05D005881 ORTHO05D007298 6.9e-27 123.6 79 72.2
CARHR227780 Cardamine hirsuta HOM05D005881 ORTHO05D007298 6.9e-27 123.6 79 73.4
Thhalv10026658m.g Eutrema salsugineum HOM05D005881 ORTHO05D007298 6.9e-27 123.6 79 73.4
Nitab4.5_0002546g0080 Nicotiana tabacum HOM05D005881 ORTHO05D007298 6.9e-27 123.6 92 62.0
BcaC01g00708 Brassica carinata HOM05D005881 ORTHO05D007298 9.0e-27 123.2 79 72.2
BolC3t20627H Brassica oleracea HOM05D005881 ORTHO05D007298 9.0e-27 123.2 79 72.2
BraA08t33500Z Brassica rapa HOM05D005881 ORTHO05D007298 9.0e-27 123.2 79 72.2
Sp7g19280 Schrenkiella parvula HOM05D005881 ORTHO05D007298 9.0e-27 123.2 75 73.3
SGA_v2.0_scaffold254G45257 Striga asiatica HOM05D005881 ORTHO05D007298 1.5e-26 122.5 75 72.0
A03p52690 Brassica napus HOM05D005881 ORTHO05D007298 9.9e-26 119.8 75 72.0
BcaC06g30655 Brassica carinata HOM05D005881 ORTHO05D007298 1.3e-25 119.4 75 72.0
BraA03t14343Z Brassica rapa HOM05D005881 ORTHO05D007298 1.3e-25 119.4 75 72.0
BcaNung00865 Brassica carinata HOM05D005881 ORTHO05D007298 2.2e-25 118.6 75 70.7
C07p51120 Brassica napus HOM05D005881 ORTHO05D007298 2.2e-25 118.6 75 70.7
BolC7t45612H Brassica oleracea HOM05D005881 ORTHO05D007298 2.2e-25 118.6 75 70.7
Gohir.1Z049313 Gossypium hirsutum HOM05D005881 ORTHO05D007298 1.1e-24 116.3 82 68.3
PGSC0003DMG400024874 Solanum tuberosum HOM05D005881 ORTHO05D007298 1.1e-24 116.3 113 50.4
FAN18G0030 Fragaria x ananassa HOM05D005881 ORTHO05D007298 4.2e-24 114.4 94 59.6
COL.COLO4_17857 Corchorus olitorius HOM05D005881 ORTHO05D007298 2.7e-23 111.7 67 79.1
Gohir.1Z049675 Gossypium hirsutum HOM05D005881 ORTHO05D007298 3.5e-23 111.3 63 76.2
Gohir.A01G140426 Gossypium hirsutum HOM05D005881 ORTHO05D007298 6.0e-23 110.5 71 73.2
CsaV3_3G006580 Cucumis sativus L. HOM05D005881 ORTHO05D007298 3.0e-22 108.2 66 75.8
Haze_20435 Corylus avellana HOM05D005881 ORTHO05D007298 3.9e-22 107.8 67 73.1
unitig_22.g6105 Utricularia gibba HOM05D005881 ORTHO05D007298 5.1e-22 107.5 67 71.6
Zm00001eb244030 Zea mays HOM05D005881 ORTHO05D007298 1.5e-21 105.9 67 71.6
MBI06_g45555_MAGBIO Magnolia biondii HOM05D005881 ORTHO05D007298 1.9e-21 105.5 65 73.8
Nitab4.5_0001057g0150 Nicotiana tabacum HOM05D005881 ORTHO05D007298 1.9e-21 105.5 64 73.4
Cfa026049 Carpinus fangiana HOM05D005881 ORTHO05D007298 2.5e-21 105.1 70 68.6
Gohir.1Z049721 Gossypium hirsutum HOM05D005881 ORTHO05D007298 4.3e-21 104.4 73 71.2
Rhsim11G0129900 Rhododendron simsii HOM05D005881 ORTHO05D007298 4.3e-21 104.4 62 77.4
Cfa021151 Carpinus fangiana HOM05D005881 ORTHO05D007298 5.6e-21 104.0 67 70.1
Gorai.011G000600 Gossypium raimondii HOM05D005881 ORTHO05D007298 5.6e-21 104.0 73 69.9
AagrBONN_evm.TU.Sc2ySwM_117.2390 Anthoceros agrestis HOM05D005881 ORTHO05D007298 2.1e-20 102.1 77 61.0
Phvul.006G085400 Phaseolus vulgaris HOM05D005881 ORTHO05D007298 4.8e-20 100.9 50 80.0
Mapoly0035s0117 Marchantia polymorpha HOM05D005881 ORTHO05D007298 6.2e-20 100.5 74 59.5
SGA_v2.0_scaffold131G34400 Striga asiatica HOM05D005881 ORTHO05D007298 1.1e-19 99.8 67 65.7
A08p15220 Brassica napus HOM05D005881 ORTHO05D007298 1.4e-19 99.4 67 71.6
EL10Ac4g07780 Beta vulgaris HOM05D000065 ORTHO05D002939 9.0e-19 96.7 51 80.4
EL10Ac4g07877 Beta vulgaris HOM05D005881 ORTHO05D007298 9.0e-19 96.7 51 80.4
Haze_09300 Corylus avellana HOM05D005881 ORTHO05D007298 5.8e-18 94.0 67 68.7
Haze_10676 Corylus avellana HOM05D005881 ORTHO05D007298 7.6e-18 93.6 67 67.2
Rhsim06G0200500 Rhododendron simsii HOM05D005881 ORTHO05D007298 7.6e-18 93.6 64 68.8
EL10Ac4g10162 Beta vulgaris HOM05D002030 ORTHO05D007413 1.0e-17 93.2 76 57.9
Haze_10008 Corylus avellana HOM05D000045 ORTHO05D001346 1.3e-17 92.8 65 64.6
EL10Ac7g16281 Beta vulgaris HOM05D005881 ORTHO05D007298 1.9e-16 89.0 47 76.6
BcaC02g10665 Brassica carinata HOM05D005881 ORTHO05D007298 2.5e-16 88.6 49 73.5
C04p26430 Brassica napus HOM05D005881 ORTHO05D007298 2.5e-16 88.6 49 73.5
BolC4t24162H Brassica oleracea HOM05D005881 ORTHO05D007298 2.5e-16 88.6 49 73.5
HPP92_009201 Vanilla planifolia HOM05D005881 ORTHO05D007298 1.9e-13 79.0 49 73.5
MELO3C032219.2 Cucumis melo HOM05D005881 ORTHO05D007298 2.4e-11 72.0 35 85.7
MCO07G551 Micromonas commoda HOM05D005881 ORTHO05D007298 3.4e-10 68.2 84 39.3
EL10Ac4g10126 Beta vulgaris HOM05D002030 ORTHO05D007413 4.5e-10 67.8 64 53.1
arahy.Tifrunner.gnm1.ann1.0A1TZX Arachis hypogaea HOM05D001400 ORTHO05D016394 1.3e-09 66.2 36 72.2
MBI06_g35042_MAGBIO Magnolia biondii HOM05D005881 ORTHO05D007298 1.1e-08 63.2 60 51.7
SHI38298 Sapria himalayana HOM05D005881 ORTHO05D000001 1.4e-08 62.8 47 59.6
Nitab4.5_0001129g0150 Nicotiana tabacum HOM05D005881 ORTHO05D007298 3.2e-08 61.6 39 76.9
SalBow5G0226 Salvia bowleyana HOM05D005881 ORTHO05D007298 1.8e-06 55.8 37 64.9


User provided reference genes

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