Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01023148001 Vitis vinifera HOM05D006009 ORTHO05D007389 1.3e-220 769.6 442 100.0
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 5.9e-157 558.1 423 75.9
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 3.9e-153 545.4 424 79.0
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 2.6e-149 532.7 423 72.8
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 1.7e-148 530.0 423 72.3
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 1.2e-146 523.9 452 69.7
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 1.4e-145 520.4 424 71.7
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 6.8e-145 518.1 424 71.5
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 2.8e-143 512.7 443 67.9
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 3.7e-143 512.3 427 70.7
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 1.6e-141 506.9 452 66.4
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 4.5e-141 505.4 428 70.1
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 2.2e-140 503.1 428 69.9
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 1.1e-139 500.7 423 69.5
Manes.10G107000 Manihot esculenta HOM05D006009 ORTHO05D007389 1.1e-139 500.7 440 68.9
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 2.3e-137 493.0 428 68.2
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 1.2e-136 490.7 427 67.7
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 1.0e-132 477.6 429 67.1
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 5.0e-132 475.3 425 66.4
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 5.2e-129 465.3 425 64.7
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 8.9e-129 464.5 425 66.8
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 1.2e-128 464.2 425 64.9
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 4.4e-128 462.2 430 64.4
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 2.2e-127 459.9 448 66.1
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 2.2e-127 459.9 423 66.4
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 1.1e-126 457.6 435 62.8
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 9.2e-126 454.5 426 61.7
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 1.6e-125 453.8 431 64.0
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 1.7e-124 450.3 427 64.4
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 6.6e-124 448.4 446 63.2
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 8.6e-124 448.0 425 62.6
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 8.6e-124 448.0 429 60.8
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 5.6e-123 445.3 448 61.4
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 7.3e-123 444.9 424 61.6
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 1.2e-122 444.1 421 62.9
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 2.1e-122 443.4 419 66.3
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 4.0e-121 439.1 428 62.4
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 8.9e-121 438.0 422 63.3
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 1.2e-120 437.6 456 59.4
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 1.5e-120 437.2 429 64.3
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 4.4e-120 435.6 421 65.6
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 7.5e-120 434.9 428 59.6
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 9.8e-120 434.5 374 70.3
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 1.3e-119 434.1 428 65.9
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 1.7e-119 433.7 440 61.4
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 6.4e-119 431.8 430 61.2
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 7.0e-118 428.3 428 60.3
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 2.7e-117 426.4 395 63.8
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 1.7e-116 423.7 427 58.8
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 1.7e-116 423.7 421 63.2
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 1.7e-116 423.7 427 59.0
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 3.0e-116 422.9 439 57.9
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 3.9e-116 422.5 437 59.3
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 3.9e-116 422.5 427 61.6
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 5.0e-116 422.2 428 62.1
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 6.6e-116 421.8 431 58.2
FAN04G2183 Fragaria x ananassa HOM05D006009 ORTHO05D007389 1.1e-115 421.0 419 62.1
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 1.5e-115 420.6 424 59.0
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 1.5e-115 420.6 430 60.0
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 1.9e-115 420.2 444 59.2
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 1.9e-115 420.2 420 64.8
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 1.9e-115 420.2 432 58.8
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 3.3e-115 419.5 425 58.1
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 3.3e-115 419.5 432 58.6
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 1.6e-114 417.2 424 59.2
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 2.8e-114 416.4 419 59.2
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 1.4e-113 414.1 431 57.1
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 1.4e-113 414.1 434 58.8
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 1.4e-113 414.1 427 60.9
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 3.1e-113 412.9 431 59.6
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 2.0e-112 410.2 430 58.8
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 9.8e-112 407.9 424 57.3
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 2.2e-111 406.8 422 57.8
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 6.4e-111 405.2 423 57.2
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 4.1e-110 402.5 429 59.4
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 1.2e-109 401.0 426 57.7
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 2.3e-108 396.7 427 57.6
CAN.G855.51 Capsicum annuum HOM05D006009 ORTHO05D007389 4.0e-105 386.0 370 62.4
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 1.5e-104 384.0 435 54.9
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 2.6e-104 383.3 426 55.9
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 3.7e-103 379.4 409 57.0
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 6.4e-103 378.6 421 54.6
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 1.9e-102 377.1 431 55.2
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 7.1e-102 375.2 424 54.5
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 5.1e-100 369.0 440 52.7
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 3.3e-99 366.3 426 54.2
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 3.3e-99 366.3 426 54.2
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 1.3e-95 354.4 446 52.5
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 9.3e-94 348.2 429 57.6
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 4.6e-93 345.9 374 55.9
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 4.4e-88 329.3 421 51.3
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 2.2e-87 327.0 423 48.7
Cpa.g.sc173.20 Carica papaya HOM05D006009 ORTHO05D007389 8.4e-87 325.1 367 56.9
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 3.0e-84 316.6 421 53.2
Zm00001eb145920 Zea mays HOM05D006009 ORTHO05D007389 2.0e-80 303.9 446 46.6
Sabra01G0173900 Salix brachista HOM05D006009 ORTHO05D007389 5.8e-80 302.4 503 46.9
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 7.6e-80 302.0 423 46.1
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 2.2e-79 300.4 431 45.7
Oeu028480.1 Olea europaea HOM05D006009 ORTHO05D007389 1.9e-75 287.3 273 61.9
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 5.1e-68 262.7 318 54.1
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 6.1e-61 239.2 274 52.6
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 1.4e-49 201.4 331 45.3
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 5.5e-38 162.9 391 34.0
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 5.5e-38 162.9 373 33.2
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 2.3e-36 157.5 378 30.4
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 2.6e-32 144.1 418 28.2
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 1.0e-23 115.5 429 25.2
SEGI_26370 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.2e-21 108.6 122 50.0
Hund15371 Selenicereus undatus HOM05D006009 ORTHO05D007389 1.4e-20 105.1 147 49.0
Oeu028483.1 Olea europaea HOM05D006009 ORTHO05D007389 5.7e-19 99.8 100 63.0
QL08p014094 Quercus lobata HOM05D006009 ORTHO05D007389 1.7e-18 98.2 95 55.8
Psat6g226760 Pisum sativum HOM05D003335 ORTHO05D003853 6.3e-18 96.3 79 64.6
SEGI_01187 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 1.2e-13 82.0 120 44.2
GSVIVG01023072001 Vitis vinifera HOM05D001300 ORTHO05D014438 1.6e-13 81.6 92 55.4
Cpa.g.sc173.18 Carica papaya HOM05D006009 ORTHO05D007389 5.7e-11 73.2 78 59.0
Glyma.14G105500 Glycine max HOM05D006009 ORTHO05D007389 3.2e-09 67.4 71 54.9
CAN.G855.52 Capsicum annuum HOM05D006009 ORTHO05D007389 1.6e-08 65.1 67 59.7
MD15G1442500 Malus domestica HOM05D006009 ORTHO05D007389 1.6e-08 65.1 38 76.3
PSO017G4247 Papaver somniferum HOM05D006009 ORTHO05D007389 2.3e-07 61.2 140 41.4
TAR376G0285 Trochodendron aralioides HOM05D006009 ORTHO05D007389 5.0e-07 60.1 39 87.2


User provided reference genes

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