Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01023147001 Vitis vinifera HOM05D006009 ORTHO05D007389 1.9e-170 602.4 316 100.0
Dinv29632 Davidia involucrata HOM05D006009 ORTHO05D007389 2.9e-134 482.3 299 85.3
CSS0016468 Camellia sinensis var. sinensis HOM05D006009 ORTHO05D007389 5.5e-133 478.0 299 82.9
Duzib160G0440 Durio zibethinus HOM05D006009 ORTHO05D007389 2.7e-132 475.7 298 82.6
TWI59G1011 Tripterygium wilfordii HOM05D006009 ORTHO05D007389 3.6e-132 475.3 299 81.3
Gorai.010G175200 Gossypium raimondii HOM05D006009 ORTHO05D007389 1.0e-131 473.8 299 81.3
QL02p103325 Quercus lobata HOM05D006009 ORTHO05D007389 1.4e-131 473.4 299 81.9
Thecc.06G017900 Theobroma cacao HOM05D006009 ORTHO05D007389 1.8e-131 473.0 299 81.9
Potri.003G000900 Populus trichocarpa HOM05D006009 ORTHO05D007389 4.0e-131 471.9 299 81.6
Prupe.1G585300 Prunus persica HOM05D006009 ORTHO05D007389 4.0e-131 471.9 299 83.6
Gohir.D06G150100 Gossypium hirsutum HOM05D006009 ORTHO05D007389 1.2e-130 470.3 299 80.6
CiPaw.05G001600 Carya illinoinensis HOM05D006009 ORTHO05D007389 1.5e-130 469.9 299 81.6
MD08G1248100 Malus domestica HOM05D006009 ORTHO05D007389 2.6e-130 469.2 299 82.9
Sabra03G0000300 Salix brachista HOM05D006009 ORTHO05D007389 2.8e-129 465.7 299 80.6
Cfa004445 Carpinus fangiana HOM05D006009 ORTHO05D007389 1.1e-128 463.8 299 80.6
Atru.chr6.240 Acer truncatum HOM05D006009 ORTHO05D007389 3.1e-128 462.2 299 80.6
Cpa.g.sc173.18 Carica papaya HOM05D006009 ORTHO05D007389 2.7e-127 459.1 298 79.9
Manes.10G106700 Manihot esculenta HOM05D006009 ORTHO05D007389 3.5e-127 458.8 301 79.4
Actinidia00150 Actinidia chinensis HOM05D006009 ORTHO05D007389 2.3e-126 456.1 299 78.6
MD15G1442900 Malus domestica HOM05D006009 ORTHO05D007389 2.3e-126 456.1 299 81.3
Solyc01g103040.4 Solanum lycopersicum HOM05D006009 ORTHO05D007389 2.9e-126 455.7 297 80.5
Rhsim11G0117900 Rhododendron simsii HOM05D006009 ORTHO05D007389 5.0e-126 454.9 299 80.3
Sopen01g045450 Solanum pennellii HOM05D006009 ORTHO05D007389 1.5e-125 453.4 297 80.1
CAN.G855.52 Capsicum annuum HOM05D006009 ORTHO05D007389 1.2e-124 450.3 297 79.1
Cc02_g23590 Coffea canephora HOM05D006009 ORTHO05D007389 2.1e-124 449.5 299 77.9
Nitab4.5_0005110g0010 Nicotiana tabacum HOM05D006009 ORTHO05D007389 2.1e-124 449.5 298 79.5
Nitab4.5_0002261g0040 Nicotiana tabacum HOM05D006009 ORTHO05D007389 6.1e-124 448.0 305 77.7
CsaV3_5G037180 Cucumis sativus L. HOM05D006009 ORTHO05D007389 1.0e-123 447.2 299 77.9
Potri.004G228900 Populus trichocarpa HOM05D006009 ORTHO05D007389 1.4e-123 446.8 301 78.4
MELO3C022930.2 Cucumis melo HOM05D006009 ORTHO05D007389 1.8e-123 446.4 299 77.9
Peaxi162Scf00011g01924 Petunia axillaris HOM05D006009 ORTHO05D007389 1.8e-123 446.4 288 81.9
RcHm_v2.0_Chr7g0219751 Rosa chinensis HOM05D006009 ORTHO05D007389 3.0e-123 445.7 299 79.3
Sc03g0005770 Simmondsia chinensis HOM05D006009 ORTHO05D007389 3.0e-123 445.7 294 79.6
MSTRG.16468 Avicennia marina HOM05D006009 ORTHO05D007389 4.0e-123 445.3 298 77.5
arahy.Tifrunner.gnm1.ann1.WHZ4K1 Arachis hypogaea HOM05D006009 ORTHO05D007389 5.2e-123 444.9 302 79.8
Ca_13530_v3 Cicer arietinum L. HOM05D006009 ORTHO05D007389 1.2e-122 443.7 299 77.6
Migut.B00722 Erythranthe guttata HOM05D006009 ORTHO05D007389 1.2e-122 443.7 301 76.4
arahy.Tifrunner.gnm1.ann1.AUD1A6 Arachis hypogaea HOM05D006009 ORTHO05D007389 1.5e-122 443.4 302 79.5
Lj4g0014586 Lotus japonicus HOM05D006009 ORTHO05D007389 9.8e-122 440.7 299 77.9
Lalb_Chr12g0195841 Lupinus albus HOM05D006009 ORTHO05D007389 9.8e-122 440.7 299 77.6
Glyma.17G001700 Glycine max HOM05D006009 ORTHO05D007389 3.7e-121 438.7 299 77.6
BcaB08g35360 Brassica carinata HOM05D006009 ORTHO05D007389 9.2e-120 434.1 298 75.8
FvH4_5g27851 Fragaria vesca HOM05D006009 ORTHO05D007389 1.2e-119 433.7 299 77.6
CARHR258850 Cardamine hirsuta HOM05D006009 ORTHO05D007389 1.6e-119 433.3 299 75.6
Psat4g001000 Pisum sativum HOM05D006009 ORTHO05D007389 1.6e-119 433.3 299 76.3
SGA_v2.0_scaffold131G34411 Striga asiatica HOM05D006009 ORTHO05D007389 2.7e-119 432.6 302 75.5
AUR62042641 Chenopodium quinoa HOM05D006009 ORTHO05D007389 5.9e-119 431.4 297 76.8
Medtr4g134640 Medicago truncatula HOM05D006009 ORTHO05D007389 5.9e-119 431.4 299 75.9
A10p08680 Brassica napus HOM05D006009 ORTHO05D007389 3.9e-118 428.7 298 75.2
BraSC37t46134Z Brassica rapa HOM05D006009 ORTHO05D007389 3.9e-118 428.7 298 75.2
PGR142G3497 Punica granatum HOM05D006009 ORTHO05D007389 3.9e-118 428.7 298 76.2
Sp6g11340 Schrenkiella parvula HOM05D006009 ORTHO05D007389 3.9e-118 428.7 298 75.2
Haze_09985 Corylus avellana HOM05D006009 ORTHO05D007389 6.6e-118 427.9 386 62.2
TPR.G5949 Trifolium pratense HOM05D006009 ORTHO05D007389 6.6e-118 427.9 299 76.6
TAR628G0644 Trochodendron aralioides HOM05D006009 ORTHO05D007389 6.6e-118 427.9 299 77.3
Thhalv10012797m.g Eutrema salsugineum HOM05D006009 ORTHO05D007389 1.1e-117 427.2 298 74.8
AL8G23820 Arabidopsis lyrata HOM05D006009 ORTHO05D007389 1.9e-117 426.4 299 74.9
AT5G49880 Arabidopsis thaliana HOM05D006009 ORTHO05D007389 4.3e-117 425.2 299 74.6
COL.COLO4_31132 Corchorus olitorius HOM05D006009 ORTHO05D007389 5.6e-117 424.9 271 81.5
AUR62032470 Chenopodium quinoa HOM05D006009 ORTHO05D007389 7.3e-117 424.5 294 76.9
BcaC04g20834 Brassica carinata HOM05D006009 ORTHO05D007389 3.6e-116 422.2 298 74.2
C09p38660 Brassica napus HOM05D006009 ORTHO05D007389 3.6e-116 422.2 298 74.2
BolC9t56722H Brassica oleracea HOM05D006009 ORTHO05D007389 3.6e-116 422.2 298 74.2
Lsat_1_v5_gn_5_104280 Lactuca sativa HOM05D006009 ORTHO05D007389 3.6e-116 422.2 301 75.1
vmacro01680 Vaccinium macrocarpon HOM05D006009 ORTHO05D007389 4.7e-116 421.8 388 62.1
ClCG11G000290 Citrullus lanatus HOM05D006009 ORTHO05D007389 2.3e-115 419.5 299 75.3
Oeu028479.1 Olea europaea HOM05D006009 ORTHO05D007389 5.8e-114 414.8 280 77.5
Ah.03g136790 Amaranthus hybridus HOM05D006009 ORTHO05D007389 1.3e-113 413.7 287 77.0
Aqoxy6G00035 Aquilegia oxysepala HOM05D006009 ORTHO05D007389 2.2e-113 412.9 301 72.4
Ciclev10000419m.g Citrus clementina HOM05D006009 ORTHO05D007389 4.9e-113 411.8 298 73.8
PSO017G1873 Papaver somniferum HOM05D006009 ORTHO05D007389 8.3e-113 411.0 300 73.7
Carub.0008s0974 Capsella rubella HOM05D006009 ORTHO05D007389 3.2e-112 409.1 299 71.9
ECA234G2369 Erigeron canadensis HOM05D006009 ORTHO05D007389 1.2e-111 407.1 290 74.5
Hma1.2p1_0052F.1_g030000 Hydrangea macrophylla HOM05D006009 ORTHO05D007389 1.6e-111 406.8 280 78.9
THA.LOC104806651 Tarenaya hassleriana HOM05D006009 ORTHO05D007389 4.6e-111 405.2 299 72.2
MBI03_g05191_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 1.3e-110 403.7 301 72.4
HanXRQChr10g0301411 Helianthus annuus HOM05D006009 ORTHO05D007389 3.0e-110 402.5 299 72.2
Oeu043610.2 Olea europaea HOM05D006009 ORTHO05D007389 3.0e-110 402.5 362 62.2
Eucgr.I02796 Eucalyptus grandis HOM05D006009 ORTHO05D007389 5.6e-109 398.3 297 72.1
Glyma.07G272700 Glycine max HOM05D006009 ORTHO05D007389 1.6e-108 396.7 272 77.6
Aa31sc62G20 Aethionema arabicum HOM05D006009 ORTHO05D007389 1.8e-107 393.3 300 70.3
DCAR_001725 Daucus carota HOM05D006009 ORTHO05D007389 2.1e-103 379.8 285 71.9
Nn5g27199 Nelumbo nucifera HOM05D006009 ORTHO05D007389 2.3e-102 376.3 301 69.8
Phvul.003G076200 Phaseolus vulgaris HOM05D006009 ORTHO05D007389 1.9e-101 373.2 277 72.9
Gohir.A06G144400 Gossypium hirsutum HOM05D006009 ORTHO05D007389 1.6e-100 370.2 299 68.2
EL10Ac6g13997 Beta vulgaris HOM05D006009 ORTHO05D007389 8.1e-100 367.9 316 65.8
unitig_8.g4550 Utricularia gibba HOM05D006009 ORTHO05D007389 6.8e-99 364.8 302 65.6
PSO170G2218 Papaver somniferum HOM05D006009 ORTHO05D007389 1.9e-96 356.7 270 71.1
ATR1089G153 Amborella trichopoda HOM05D006009 ORTHO05D007389 3.3e-93 345.9 307 62.5
FAN08G0569 Fragaria x ananassa HOM05D006009 ORTHO05D007389 7.3e-93 344.7 360 59.4
Os01g0877300 Oryza sativa ssp. japonica HOM05D006009 ORTHO05D007389 5.2e-91 338.6 303 61.1
FAN04G2183 Fragaria x ananassa HOM05D006009 ORTHO05D007389 4.4e-90 335.5 239 76.2
CDE05G2940 Ceratophyllum demersum HOM05D006009 ORTHO05D007389 1.1e-85 320.9 297 60.6
HPP92_003614 Vanilla planifolia HOM05D006009 ORTHO05D007389 7.6e-82 308.1 301 58.1
ECA234G2367 Erigeron canadensis HOM05D000005 ORTHO05D000012 5.6e-77 292.0 302 57.6
Lj5C283T7 Lonicera japonica HOM05D006009 ORTHO05D007389 4.8e-76 288.9 274 60.6
CANSAT01G0444 Cannabis sativa HOM05D006009 ORTHO05D007389 4.5e-50 202.6 162 70.4
Sed0013076 Sechium edule HOM05D006009 ORTHO05D007389 2.6e-42 176.8 144 70.8
Eucgr.D02407 Eucalyptus grandis HOM05D006009 ORTHO05D007389 1.3e-41 174.5 136 70.6
Pp3c17_20400 Physcomitrium patens HOM05D006009 ORTHO05D007389 3.8e-41 172.9 314 37.6
SMO343G0014 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 2.5e-32 143.7 280 36.8
AagrBONN_evm.TU.Sc2ySwM_228.1218 Anthoceros agrestis HOM05D006009 ORTHO05D007389 3.3e-29 133.3 302 32.1
CBR_g38734 Chara braunii HOM05D006009 ORTHO05D007389 4.4e-29 132.9 277 35.4
Mapoly0034s0031 Marchantia polymorpha HOM05D006009 ORTHO05D007389 7.4e-29 132.1 286 30.1
SEGI_34522 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 2.4e-27 127.1 82 72.0
SEGI_19376 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 2.7e-23 113.6 110 56.4
SHI05061 Sapria himalayana HOM05D000030 ORTHO05D000009 4.1e-19 99.8 107 53.3
MBI06_g11892_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D004199 1.1e-16 91.7 105 57.1
FAN18G4220 Fragaria x ananassa HOM05D006009 ORTHO05D007389 5.5e-16 89.4 94 58.5
PRCOL_00003389 Prasinoderma coloniale HOM05D006009 ORTHO05D007389 7.2e-16 89.0 339 26.3
MBI18_g16980_MAGBIO Magnolia biondii HOM05D005644 ORTHO05D007092 2.3e-14 84.0 54 81.5
SMO343G0089 Selaginella moellendorffii HOM05D006009 ORTHO05D007389 3.0e-14 83.6 250 31.6
MCO13G251 Micromonas commoda HOM05D006009 ORTHO05D007389 8.8e-14 82.0 115 39.1
MBI18_g20174_MAGBIO Magnolia biondii HOM05D006009 ORTHO05D007389 9.8e-13 78.6 67 61.2
Zm00001eb351220 Zea mays HOM05D006009 ORTHO05D007389 4.1e-11 73.2 56 66.1
GSVIVG01023072001 Vitis vinifera HOM05D001300 ORTHO05D014438 5.6e-08 62.8 40 75.0
RhsimUnG0219700 Rhododendron simsii HOM05D006009 ORTHO05D007389 1.4e-06 58.2 40 75.0
SEGI_32656 Sequoiadendron giganteum HOM05D006009 ORTHO05D007389 8.9e-06 55.5 116 36.2


User provided reference genes

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