Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01023086001 Vitis vinifera HOM05D006649 ORTHO05D008754 3.2e-43 177.9 86 100.0
CAN.G644.11 Capsicum annuum HOM05D006649 ORTHO05D008754 1.2e-13 79.7 67 58.2
Nitab4.5_0006735g0030 Nicotiana tabacum HOM05D006649 ORTHO05D008754 2.0e-13 79.0 67 58.2
Nitab4.5_0009861g0020 Nicotiana tabacum HOM05D006649 ORTHO05D008754 2.0e-13 79.0 67 58.2
Peaxi162Scf01284g00017 Petunia axillaris HOM05D006649 ORTHO05D008754 2.0e-13 79.0 65 58.5
Solyc11g067060.3 Solanum lycopersicum HOM05D006649 ORTHO05D008754 2.0e-13 79.0 67 58.2
Sopen11g026770 Solanum pennellii HOM05D006649 ORTHO05D008754 2.0e-13 79.0 67 58.2
PGSC0003DMG400026546 Solanum tuberosum HOM05D006649 ORTHO05D008754 2.0e-13 79.0 67 58.2
FAN25G2701 Fragaria x ananassa HOM05D006649 ORTHO05D008754 3.5e-13 78.2 67 58.2
Medtr4g055030 Medicago truncatula HOM05D006649 ORTHO05D008754 7.7e-13 77.0 76 50.0
RcHm_v2.0_Chr5g0043851 Rosa chinensis HOM05D006649 ORTHO05D008754 7.7e-13 77.0 67 56.7
Actinidia24190 Actinidia chinensis HOM05D006649 ORTHO05D008754 1.3e-12 76.3 67 56.7
FvH4_3g24360 Fragaria vesca HOM05D006649 ORTHO05D008754 1.3e-12 76.3 67 56.7
Potri.004G186400 Populus trichocarpa HOM05D006649 ORTHO05D008754 1.3e-12 76.3 67 55.2
GSVIVG01031373001 Vitis vinifera HOM05D006649 ORTHO05D008754 1.3e-12 76.3 49 75.5
CANSAT54G3044 Cannabis sativa HOM05D006649 ORTHO05D008754 2.3e-12 75.5 67 55.2
CiPaw.13G139500 Carya illinoinensis HOM05D006649 ORTHO05D008754 2.3e-12 75.5 63 58.7
Lj2A991T88 Lonicera japonica HOM05D006649 ORTHO05D008754 2.3e-12 75.5 68 55.9
Psat7g189840 Pisum sativum HOM05D006649 ORTHO05D008754 2.3e-12 75.5 79 46.8
Manes.11G159300 Manihot esculenta HOM05D006649 ORTHO05D008754 2.9e-12 75.1 49 73.5
Sabra04G0125600 Salix brachista HOM05D006649 ORTHO05D008754 2.9e-12 75.1 67 55.2
THA.LOC104810902 Tarenaya hassleriana HOM05D006649 ORTHO05D008754 2.9e-12 75.1 67 55.2
TPR.G15571 Trifolium pratense HOM05D006649 ORTHO05D008754 2.9e-12 75.1 77 46.8
Lj3g0022718 Lotus japonicus HOM05D006649 ORTHO05D008754 5.0e-12 74.3 76 50.0
Hund20864 Selenicereus undatus HOM05D006649 ORTHO05D008754 5.0e-12 74.3 67 55.2
Prupe.6G122700 Prunus persica HOM05D006649 ORTHO05D008754 6.6e-12 73.9 67 55.2
Glyma.12G086800 Glycine max HOM05D006649 ORTHO05D008754 1.5e-11 72.8 67 53.7
Lalb_Chr19g0136681 Lupinus albus HOM05D006649 ORTHO05D008754 1.5e-11 72.8 79 45.6
Manes.04G006800 Manihot esculenta HOM05D006649 ORTHO05D008754 1.5e-11 72.8 49 71.4
vmacro03292 Vaccinium macrocarpon HOM05D006649 ORTHO05D008754 1.5e-11 72.8 67 53.7
Cc01_g09580 Coffea canephora HOM05D006649 ORTHO05D008754 1.9e-11 72.4 76 50.0
Nn6g35002 Nelumbo nucifera HOM05D006649 ORTHO05D008754 1.9e-11 72.4 49 69.4
Potri.009G146800 Populus trichocarpa HOM05D006649 ORTHO05D008754 1.9e-11 72.4 49 69.4
Rhsim13G0107300 Rhododendron simsii HOM05D006649 ORTHO05D008754 1.9e-11 72.4 67 53.7
Sp5g16580 Schrenkiella parvula HOM05D006649 ORTHO05D008754 1.9e-11 72.4 63 55.6
Thecc.09G288800 Theobroma cacao HOM05D006649 ORTHO05D008754 1.9e-11 72.4 54 66.7
BcaC01g02065 Brassica carinata HOM05D006649 ORTHO05D008754 2.5e-11 72.0 63 55.6
C03p69000 Brassica napus HOM05D006649 ORTHO05D008754 2.5e-11 72.0 63 55.6
BolC3t19153H Brassica oleracea HOM05D006649 ORTHO05D008754 2.5e-11 72.0 63 55.6
Duzib170G0763 Durio zibethinus HOM05D006649 ORTHO05D008754 2.5e-11 72.0 49 69.4
Gohir.D05G085700 Gossypium hirsutum HOM05D006649 ORTHO05D008754 2.5e-11 72.0 49 69.4
Gorai.009G087400 Gossypium raimondii HOM05D000146 ORTHO05D000178 2.5e-11 72.0 49 69.4
Sabra09G0115900 Salix brachista HOM05D006649 ORTHO05D008754 2.5e-11 72.0 62 61.3
AT3G44620 Arabidopsis thaliana HOM05D006649 ORTHO05D008754 3.3e-11 71.6 67 52.2
arahy.Tifrunner.gnm1.ann1.AS0IPM Arachis hypogaea HOM05D006649 ORTHO05D008754 3.3e-11 71.6 68 51.5
arahy.Tifrunner.gnm1.ann1.WDN5HE Arachis hypogaea HOM05D006649 ORTHO05D008754 3.3e-11 71.6 68 51.5
Carub.0005s1026 Capsella rubella HOM05D006649 ORTHO05D008754 3.3e-11 71.6 67 52.2
Carub.0015s0012 Capsella rubella HOM05D006649 ORTHO05D008754 3.3e-11 71.6 67 52.2
Carub.0015s0017 Capsella rubella HOM05D006649 ORTHO05D008754 3.3e-11 71.6 67 52.2
CARHR151530 Cardamine hirsuta HOM05D006649 ORTHO05D008754 3.3e-11 71.6 67 52.2
Eucgr.J00458 Eucalyptus grandis HOM05D006649 ORTHO05D008754 3.3e-11 71.6 64 54.7
Lsat_1_v5_gn_1_62060 Lactuca sativa HOM05D006649 ORTHO05D008754 3.3e-11 71.6 76 48.7
Nn2g14062 Nelumbo nucifera HOM05D006649 ORTHO05D008754 3.3e-11 71.6 67 52.2
A06p21790 Brassica napus HOM05D006649 ORTHO05D008754 4.2e-11 71.2 63 55.6
BraA06t25266Z Brassica rapa HOM05D006649 ORTHO05D008754 4.2e-11 71.2 63 55.6
CSS0022960 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 7.2e-11 70.5 48 70.8
CDE06G0522 Ceratophyllum demersum HOM05D006649 ORTHO05D008754 7.2e-11 70.5 57 57.9
AUR62009801 Chenopodium quinoa HOM05D006649 ORTHO05D008754 7.2e-11 70.5 67 52.2
Ca_19382_v3 Cicer arietinum L. HOM05D006649 ORTHO05D008754 7.2e-11 70.5 68 50.0
DCAR_006154 Daucus carota HOM05D006649 ORTHO05D008754 7.2e-11 70.5 68 52.9
Glyma.11G187700 Glycine max HOM05D006649 ORTHO05D008754 7.2e-11 70.5 67 52.2
Hma1.2p1_0695F.1_g204540 Hydrangea macrophylla HOM05D006649 ORTHO05D008754 7.2e-11 70.5 63 54.0
PSO384G2883 Papaver somniferum HOM05D006649 ORTHO05D008754 7.2e-11 70.5 49 67.3
QL01p013359 Quercus lobata HOM05D006649 ORTHO05D008754 7.2e-11 70.5 67 52.2
AUR62039249 Chenopodium quinoa HOM05D006649 ORTHO05D008754 9.5e-11 70.1 67 52.2
PSO339G3959 Papaver somniferum HOM05D006649 ORTHO05D008754 9.5e-11 70.1 49 67.3
Phvul.011G091000 Phaseolus vulgaris HOM05D006649 ORTHO05D008754 9.5e-11 70.1 76 46.1
PGR119G1752 Punica granatum HOM05D006649 ORTHO05D008754 9.5e-11 70.1 47 70.2
Gohir.A05G082800 Gossypium hirsutum HOM05D006649 ORTHO05D008754 1.6e-10 69.3 49 67.3
HanXRQChr01g0019741 Helianthus annuus HOM05D006649 ORTHO05D008754 1.6e-10 69.3 68 51.5
MD11G1159700 Malus domestica HOM05D006649 ORTHO05D008754 1.6e-10 69.3 49 67.3
TPR.G9708 Trifolium pratense HOM05D006649 ORTHO05D008754 1.6e-10 69.3 72 51.4
Duzib168G0232 Durio zibethinus HOM05D006649 ORTHO05D008754 2.1e-10 68.9 49 65.3
SalBow6G0396 Salvia bowleyana HOM05D006649 ORTHO05D008754 2.1e-10 68.9 67 52.2
VMungo1127G2203 Vigna mungo HOM05D006649 ORTHO05D008754 2.1e-10 68.9 76 46.1
Haze_23431 Corylus avellana HOM05D006649 ORTHO05D008754 2.8e-10 68.6 63 54.0
Thhalv10003008m.g Eutrema salsugineum HOM05D006649 ORTHO05D008754 2.8e-10 68.6 48 68.8
TWI79G0266 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 4.7e-10 67.8 49 67.3
TWI79G0985 Tripterygium wilfordii HOM05D006649 ORTHO05D008754 4.7e-10 67.8 49 67.3
SGA_v2.0_scaffold147G36353 Striga asiatica HOM05D006649 ORTHO05D008754 6.1e-10 67.4 67 50.7
TAR633G2780 Trochodendron aralioides HOM05D006649 ORTHO05D008754 6.1e-10 67.4 67 47.8
Aa31LG4G14340 Aethionema arabicum HOM05D006649 ORTHO05D008754 1.0e-09 66.6 48 66.7
MELO3C021441.2 Cucumis melo HOM05D006649 ORTHO05D008754 1.4e-09 66.2 67 49.3
Oeu035544.1 Olea europaea HOM05D006649 ORTHO05D008754 1.4e-09 66.2 47 68.1
Sc21g0004770 Simmondsia chinensis HOM05D006649 ORTHO05D008754 1.4e-09 66.2 63 49.2
HPP92_013801 Vanilla planifolia HOM05D006649 ORTHO05D008754 1.8e-09 65.9 49 63.3
BcaB01g01150 Brassica carinata HOM05D006649 ORTHO05D008754 2.3e-09 65.5 63 52.4
Migut.N02505 Erythranthe guttata HOM05D006649 ORTHO05D008754 2.3e-09 65.5 67 49.3
Cfa010067 Carpinus fangiana HOM05D006649 ORTHO05D008754 4.0e-09 64.7 67 49.3
ClCG02G022010 Citrullus lanatus HOM05D006649 ORTHO05D008754 4.0e-09 64.7 67 49.3
EL10Ac7g15785 Beta vulgaris HOM05D006649 ORTHO05D008754 5.2e-09 64.3 59 55.9
Mapoly0056s0130 Marchantia polymorpha HOM05D006649 ORTHO05D008754 5.2e-09 64.3 66 43.9
Os08g0557400 Oryza sativa ssp. japonica HOM05D006649 ORTHO05D008754 5.2e-09 64.3 63 49.2
unitig_8.g3286 Utricularia gibba HOM05D006649 ORTHO05D008754 5.2e-09 64.3 67 46.3
Atru.chr3.3344 Acer truncatum HOM05D006649 ORTHO05D008754 6.8e-09 63.9 49 63.3
CsaV3_6G014840 Cucumis sativus L. HOM05D006649 ORTHO05D008754 8.9e-09 63.5 67 47.8
Zm00001eb039610 Zea mays HOM05D006649 ORTHO05D008754 8.9e-09 63.5 63 49.2
ATR0820G177 Amborella trichopoda HOM05D006649 ORTHO05D008754 1.2e-08 63.2 65 46.2
Pp3c2_15060 Physcomitrium patens HOM05D006649 ORTHO05D008754 1.2e-08 63.2 65 47.7
Sed0010741 Sechium edule HOM05D006649 ORTHO05D008754 2.0e-08 62.4 67 47.8
CSS0006150 Camellia sinensis var. sinensis HOM05D006649 ORTHO05D008754 3.4e-08 61.6 63 49.2
CBR_g29713 Chara braunii HOM05D006649 ORTHO05D008754 7.5e-08 60.5 75 41.3
COL.COLO4_19946 Corchorus olitorius HOM05D000146 ORTHO05D000178 8.3e-07 57.0 38 68.4
SMO356G0095 Selaginella moellendorffii HOM05D006649 ORTHO05D008754 7.0e-06 53.9 46 54.3


User provided reference genes

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