Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01023067001 Vitis vinifera HOM05D037869 ORTHO05D439984 1.4e-139 499.6 250 100.0
GSVIVG01023044001 Vitis vinifera HOM05D037869 ORTHO05D438045 1.7e-23 114.0 58 98.3
GSVIVG01013908001 Vitis vinifera HOM05D037869 ORTHO05D440025 1.3e-20 104.4 60 90.0
Pp3c6_3470 Physcomitrium patens HOM05D001863 ORTHO05D001962 1.6e-13 80.9 52 65.4
Oeu059908.1 Olea europaea HOM05D001863 ORTHO05D001962 2.7e-13 80.1 49 71.4
PSO017G6649 Papaver somniferum HOM05D001863 ORTHO05D001962 4.5e-13 79.3 49 69.4
PSO478G4395 Papaver somniferum HOM05D001863 ORTHO05D001962 4.5e-13 79.3 49 69.4
Pp3c8_5770 Physcomitrium patens HOM05D001863 ORTHO05D001962 4.5e-13 79.3 52 63.5
Pp3c20_18830 Physcomitrium patens HOM05D001863 ORTHO05D001962 7.7e-13 78.6 49 65.3
Pp3c5_26860 Physcomitrium patens HOM05D001863 ORTHO05D001962 1.0e-12 78.2 52 63.5
Pp3c16_22430 Physcomitrium patens HOM05D001863 ORTHO05D001962 1.3e-12 77.8 52 63.5
AUR62005458 Chenopodium quinoa HOM05D001863 ORTHO05D001962 2.3e-12 77.0 39 79.5
AUR62024283 Chenopodium quinoa HOM05D001863 ORTHO05D001962 2.3e-12 77.0 39 79.5
COL.COLO4_20240 Corchorus olitorius HOM05D001863 ORTHO05D001962 2.3e-12 77.0 40 75.0
Gohir.D09G024400 Gossypium hirsutum HOM05D001863 ORTHO05D001962 2.3e-12 77.0 49 67.3
AUR62011746 Chenopodium quinoa HOM05D001863 ORTHO05D001962 2.9e-12 76.6 39 79.5
AUR62024583 Chenopodium quinoa HOM05D001863 ORTHO05D001962 2.9e-12 76.6 39 79.5
AUR62024586 Chenopodium quinoa HOM05D001863 ORTHO05D001962 2.9e-12 76.6 39 79.5
AUR62024589 Chenopodium quinoa HOM05D001863 ORTHO05D001962 2.9e-12 76.6 39 79.5
TAR374G0710 Trochodendron aralioides HOM05D001863 ORTHO05D001962 2.9e-12 76.6 65 60.0
Gohir.A04G136600 Gossypium hirsutum HOM05D001863 ORTHO05D001962 3.8e-12 76.3 39 76.9
Sabra06G0067500 Salix brachista HOM05D001863 ORTHO05D001962 3.8e-12 76.3 39 79.5
AL1G24600 Arabidopsis lyrata HOM05D001863 ORTHO05D001962 5.0e-12 75.9 39 79.5
MSTRG.7926 Avicennia marina HOM05D001863 ORTHO05D001962 5.0e-12 75.9 39 76.9
Pp3c25_13260 Physcomitrium patens HOM05D001863 ORTHO05D001962 5.0e-12 75.9 52 61.5
Dinv20605 Davidia involucrata HOM05D001863 ORTHO05D001962 6.5e-12 75.5 39 79.5
Atru.chr11.2105 Acer truncatum HOM05D001863 ORTHO05D001962 8.6e-12 75.1 39 74.4
COL.COLO4_16313 Corchorus olitorius HOM05D001863 ORTHO05D001962 8.6e-12 75.1 40 72.5
FAN25G1250 Fragaria x ananassa HOM05D001863 ORTHO05D001962 8.6e-12 75.1 39 76.9
HanXRQChr10g0296191 Helianthus annuus HOM05D001863 ORTHO05D001962 8.6e-12 75.1 49 63.3
GSVIVG01007667001 Vitis vinifera HOM05D001863 ORTHO05D001962 8.6e-12 75.1 39 76.9
Aa31LG5G21870 Aethionema arabicum HOM05D001863 ORTHO05D001962 1.1e-11 74.7 91 42.9
Lalb_Chr05g0216581 Lupinus albus HOM05D001863 ORTHO05D001962 1.1e-11 74.7 39 76.9
Mapoly0033s0117 Marchantia polymorpha HOM05D001863 ORTHO05D001962 1.1e-11 74.7 52 61.5
Nitab4.5_0000003g0780 Nicotiana tabacum HOM05D001863 ORTHO05D001962 1.1e-11 74.7 39 76.9
Nitab4.5_0001683g0030 Nicotiana tabacum HOM05D001863 ORTHO05D001962 1.1e-11 74.7 39 76.9
Oeu036514.1 Olea europaea HOM05D001863 ORTHO05D001962 1.1e-11 74.7 47 66.0
CARHR023730 Cardamine hirsuta HOM05D001863 ORTHO05D001962 1.5e-11 74.3 49 65.3
AagrBONN_evm.TU.Sc2ySwM_228.3113 Anthoceros agrestis HOM05D001863 ORTHO05D001962 1.9e-11 73.9 48 60.4
EL10Ac6g13627 Beta vulgaris HOM05D001863 ORTHO05D001962 1.9e-11 73.9 39 76.9
CARHR063830 Cardamine hirsuta HOM05D001863 ORTHO05D001962 1.9e-11 73.9 49 65.3
Atru.chr6.2395 Acer truncatum HOM05D001863 ORTHO05D001962 2.5e-11 73.6 39 74.4
Mapoly0078s0013 Marchantia polymorpha HOM05D001863 ORTHO05D001962 2.5e-11 73.6 52 59.6
Nitab4.5_0005004g0030 Nicotiana tabacum HOM05D001863 ORTHO05D001962 2.5e-11 73.6 39 74.4
Nitab4.5_0005842g0030 Nicotiana tabacum HOM05D001863 ORTHO05D001962 2.5e-11 73.6 39 74.4
CDE02G3114 Ceratophyllum demersum HOM05D001863 ORTHO05D001962 4.2e-11 72.8 49 63.3
CDE09G0224 Ceratophyllum demersum HOM05D001863 ORTHO05D001962 4.2e-11 72.8 49 63.3
C06p44600 Brassica napus HOM05D001863 ORTHO05D001962 5.5e-11 72.4 39 74.4
BolC6t39524H Brassica oleracea HOM05D001863 ORTHO05D001962 5.5e-11 72.4 39 74.4
GSVIVG01032405001 Vitis vinifera HOM05D001863 ORTHO05D001962 5.5e-11 72.4 37 81.1
FAN21G2882 Fragaria x ananassa HOM05D001863 ORTHO05D001962 7.2e-11 72.0 39 71.8
Lalb_Chr12g0201871 Lupinus albus HOM05D001863 ORTHO05D001962 7.2e-11 72.0 39 76.9
CDE04G3012 Ceratophyllum demersum HOM05D001863 ORTHO05D001962 9.5e-11 71.6 39 74.4
CDE07G0834 Ceratophyllum demersum HOM05D002732 ORTHO05D002955 9.5e-11 71.6 39 74.4
Lalb_Chr07g0182961 Lupinus albus HOM05D001863 ORTHO05D001962 9.5e-11 71.6 39 76.9
Lalb_Chr13g0297651 Lupinus albus HOM05D001863 ORTHO05D001962 9.5e-11 71.6 39 76.9
TPR.G38806 Trifolium pratense HOM05D001863 ORTHO05D001962 9.5e-11 71.6 39 76.9
Lalb_Chr09g0326121 Lupinus albus HOM05D001863 ORTHO05D001962 1.2e-10 71.2 39 74.4
Lalb_Chr16g0381941 Lupinus albus HOM05D001863 ORTHO05D001962 1.2e-10 71.2 39 74.4
AagrBONN_evm.TU.Sc2ySwM_362.941 Anthoceros agrestis HOM05D001863 ORTHO05D001962 1.6e-10 70.9 48 60.4
COL.COLO4_29145 Corchorus olitorius HOM05D001863 ORTHO05D001962 1.6e-10 70.9 40 67.5
Gohir.D02G159000 Gossypium hirsutum HOM05D001863 ORTHO05D001962 1.6e-10 70.9 39 74.4
Oeu015408.1 Olea europaea HOM05D001863 ORTHO05D001962 2.1e-10 70.5 47 63.8
COL.COLO4_08413 Corchorus olitorius HOM05D001863 ORTHO05D001962 2.8e-10 70.1 39 71.8
SHI17230 Sapria himalayana HOM05D001863 ORTHO05D001962 1.4e-09 67.8 39 66.7
Cpa.g.sc33.14 Carica papaya HOM05D001863 ORTHO05D001962 2.3e-09 67.0 39 69.2
Ca_16136_v3 Cicer arietinum L. HOM05D001863 ORTHO05D001962 2.3e-09 67.0 38 73.7
Oeu036015.1 Olea europaea HOM05D001863 ORTHO05D001962 2.3e-09 67.0 59 52.5
Potri.010G045800 Populus trichocarpa HOM05D001863 ORTHO05D001962 5.2e-09 65.9 39 71.8
Potri.016G069000 Populus trichocarpa HOM05D001863 ORTHO05D001962 5.2e-09 65.9 39 71.8
Sabra10G0022700 Salix brachista HOM05D001863 ORTHO05D001962 5.2e-09 65.9 39 71.8
Cc11_g15690 Coffea canephora HOM05D001863 ORTHO05D001962 6.8e-09 65.5 42 66.7
Ah.02g110660 Amaranthus hybridus HOM05D001863 ORTHO05D001962 8.8e-09 65.1 39 69.2
arahy.Tifrunner.gnm1.ann1.454J86 Arachis hypogaea HOM05D001863 ORTHO05D001962 1.2e-08 64.7 39 69.2
arahy.Tifrunner.gnm1.ann1.W50V02 Arachis hypogaea HOM05D001863 ORTHO05D001962 1.2e-08 64.7 39 69.2
Cc04_g11730 Coffea canephora HOM05D001863 ORTHO05D001962 1.5e-08 64.3 39 69.2
Sed0019027 Sechium edule HOM05D001863 ORTHO05D001962 1.5e-08 64.3 39 64.1
THA.LOC104825660 Tarenaya hassleriana HOM05D001863 ORTHO05D001962 1.5e-08 64.3 39 66.7
VMungo1215G1059 Vigna mungo HOM05D001863 ORTHO05D001962 1.5e-08 64.3 42 64.3
Ah.11g051270 Amaranthus hybridus HOM05D001863 ORTHO05D001962 2.0e-08 63.9 39 66.7
THA.LOC104809056 Tarenaya hassleriana HOM05D001863 ORTHO05D001962 2.0e-08 63.9 39 66.7
Phvul.009G174700 Phaseolus vulgaris HOM05D001863 ORTHO05D001962 2.6e-08 63.5 39 66.7
RcHm_v2.0_Chr2g0172781 Rosa chinensis HOM05D001863 ORTHO05D001962 2.6e-08 63.5 39 66.7
SalBow5G3080 Salvia bowleyana HOM05D001863 ORTHO05D001962 3.4e-08 63.2 39 66.7
Sc10g0010210 Simmondsia chinensis HOM05D001863 ORTHO05D001962 3.4e-08 63.2 39 64.1
VMungo1309G1936 Vigna mungo HOM05D001863 ORTHO05D001962 3.4e-08 63.2 61 50.8
Aa31LG7G7320 Aethionema arabicum HOM05D001863 ORTHO05D001962 4.4e-08 62.8 91 39.6
MSTRG.569 Avicennia marina HOM05D001863 ORTHO05D001962 5.7e-08 62.4 39 64.1
AL1G37070 Arabidopsis lyrata HOM05D001863 ORTHO05D001962 7.5e-08 62.0 49 55.1
AT1G23290 Arabidopsis thaliana HOM05D001863 ORTHO05D001962 7.5e-08 62.0 49 55.1
Carub.0001s2288 Capsella rubella HOM05D001863 ORTHO05D001962 7.5e-08 62.0 49 55.1
Carub.0002s1733 Capsella rubella HOM05D001863 ORTHO05D001962 7.5e-08 62.0 49 55.1
AL2G30030 Arabidopsis lyrata HOM05D001863 ORTHO05D001962 9.8e-08 61.6 49 55.1
AT1G70600 Arabidopsis thaliana HOM05D001863 ORTHO05D001962 9.8e-08 61.6 49 55.1
Thhalv10009027m.g Eutrema salsugineum HOM05D001863 ORTHO05D001962 9.8e-08 61.6 49 55.1
Thhalv10019240m.g Eutrema salsugineum HOM05D001863 ORTHO05D001962 9.8e-08 61.6 49 55.1
BcaB07g32317 Brassica carinata HOM05D001863 ORTHO05D001962 1.3e-07 61.2 39 64.1
SMO361G0030 Selaginella moellendorffii HOM05D001863 ORTHO05D001962 1.3e-07 61.2 39 64.1
SMO361G0484 Selaginella moellendorffii HOM05D000141 ORTHO05D001968 1.3e-07 61.2 39 64.1
BcaB05g24598 Brassica carinata HOM05D001863 ORTHO05D001962 2.2e-07 60.5 49 53.1
Sp1g20730 Schrenkiella parvula HOM05D001863 ORTHO05D001962 2.2e-07 60.5 49 53.1
Sp5g25760 Schrenkiella parvula HOM05D001863 ORTHO05D001962 2.2e-07 60.5 49 53.1
BcaB03g11931 Brassica carinata HOM05D001863 ORTHO05D001962 2.8e-07 60.1 39 61.5
BcaB03g14152 Brassica carinata HOM05D001863 ORTHO05D001962 2.8e-07 60.1 39 61.5
BcaC03g15212 Brassica carinata HOM05D001863 ORTHO05D001962 2.8e-07 60.1 39 61.5
A02p16730 Brassica napus HOM05D001863 ORTHO05D001962 2.8e-07 60.1 39 61.5
A07p37040 Brassica napus HOM05D001863 ORTHO05D001962 2.8e-07 60.1 39 61.5
C02p27990 Brassica napus HOM05D001863 ORTHO05D001962 2.8e-07 60.1 39 61.5
BolC2t08842H Brassica oleracea HOM05D001863 ORTHO05D001962 2.8e-07 60.1 39 61.5
BraA02t06727Z Brassica rapa HOM05D001863 ORTHO05D001962 2.8e-07 60.1 39 61.5
BraA07t31266Z Brassica rapa HOM05D001863 ORTHO05D001962 2.8e-07 60.1 39 61.5
HanXRQChr06g0182741 Helianthus annuus HOM05D001863 ORTHO05D001962 3.7e-07 59.7 39 66.7
Nn1g03149 Nelumbo nucifera HOM05D001863 ORTHO05D001962 3.7e-07 59.7 39 64.1
Sc04g0009440 Simmondsia chinensis HOM05D001863 ORTHO05D001962 4.9e-07 59.3 39 61.5
Hma1.2p1_0592F.1_g185600 Hydrangea macrophylla HOM05D001863 ORTHO05D001962 1.1e-06 58.2 42 59.5
Os03g0408300 Oryza sativa ssp. japonica HOM05D001863 ORTHO05D001962 1.1e-06 58.2 39 56.4
unitig_22.g6290 Utricularia gibba HOM05D001863 ORTHO05D001962 1.8e-06 57.4 39 59.0
unitig_8.g3061 Utricularia gibba HOM05D001863 ORTHO05D001962 1.8e-06 57.4 39 59.0
PRCOL_00003699 Prasinoderma coloniale HOM05D001863 ORTHO05D001962 2.4e-06 57.0 40 57.5
SalBow6G0391 Salvia bowleyana HOM05D001863 ORTHO05D001962 5.4e-06 55.8 49 55.1
unitig_26.g9613 Utricularia gibba HOM05D001863 ORTHO05D001962 7.0e-06 55.5 39 59.0
Ah.03g133050 Amaranthus hybridus HOM05D001863 ORTHO05D001962 9.2e-06 55.1 39 59.0


User provided reference genes

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