Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01022785001 Vitis vinifera HOM05D005964 ORTHO05D007242 4.7e-177 624.4 311 100.0
Dinv28013 Davidia involucrata HOM05D005964 ORTHO05D007242 1.0e-94 350.9 240 72.1
Dinv22873 Davidia involucrata HOM05D005964 ORTHO05D007242 2.7e-92 342.8 241 70.1
Gohir.A03G000012 Gossypium hirsutum HOM05D005964 ORTHO05D007242 1.5e-90 337.0 244 68.0
Thecc.03G317600 Theobroma cacao HOM05D005964 ORTHO05D007242 2.8e-89 332.8 244 67.2
Duzib205G1143 Durio zibethinus HOM05D005964 ORTHO05D007242 3.7e-89 332.4 246 67.9
CiPaw.11G103200 Carya illinoinensis HOM05D005964 ORTHO05D007242 1.4e-88 330.5 245 70.2
Prupe.5G020400 Prunus persica HOM05D005964 ORTHO05D007242 1.4e-88 330.5 219 74.0
Duzib084G0482 Durio zibethinus HOM05D005964 ORTHO05D007242 5.3e-88 328.6 246 68.3
Cfa012590 Carpinus fangiana HOM05D005964 ORTHO05D007242 3.5e-87 325.9 219 72.6
Gohir.D03G177900 Gossypium hirsutum HOM05D005964 ORTHO05D007242 1.0e-86 324.3 266 63.2
Gorai.003G187200 Gossypium raimondii HOM05D005964 ORTHO05D007242 1.0e-86 324.3 266 63.2
Hma1.2p1_0544F.1_g175520 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 1.0e-86 324.3 230 67.8
Lj8A334G75 Lonicera japonica HOM05D005964 ORTHO05D007242 2.2e-86 323.2 238 66.0
MD06G1015300 Malus domestica HOM05D005964 ORTHO05D007242 2.2e-86 323.2 218 72.9
MD00G1001800 Malus domestica HOM05D005964 ORTHO05D007242 3.8e-86 322.4 218 73.4
TAR381G0569 Trochodendron aralioides HOM05D005964 ORTHO05D007242 3.8e-86 322.4 252 66.7
CANSAT21G0049 Cannabis sativa HOM05D005964 ORTHO05D007242 8.5e-86 321.2 238 68.5
Atru.chr6.1471 Acer truncatum HOM05D005964 ORTHO05D007242 9.4e-85 317.8 246 65.9
Actinidia18160 Actinidia chinensis HOM05D005964 ORTHO05D007242 1.2e-84 317.4 247 63.6
Gorai.004G178600 Gossypium raimondii HOM05D005964 ORTHO05D007242 3.6e-84 315.8 244 64.3
RcHm_v2.0_Chr7g0213391 Rosa chinensis HOM05D005964 ORTHO05D007242 4.7e-84 315.5 237 66.7
Actinidia14743 Actinidia chinensis HOM05D005964 ORTHO05D007242 6.1e-84 315.1 216 70.4
Gohir.D08G171200 Gossypium hirsutum HOM05D005964 ORTHO05D007242 8.0e-84 314.7 244 64.3
Cc08_g05080 Coffea canephora HOM05D005964 ORTHO05D007242 4.0e-83 312.4 204 72.1
Potri.001G130900 Populus trichocarpa HOM05D005964 ORTHO05D007242 6.8e-83 311.6 249 63.1
FvH4_5g23960 Fragaria vesca HOM05D005964 ORTHO05D007242 1.2e-82 310.8 219 69.4
Peaxi162Scf02295g00024 Petunia axillaris HOM05D005964 ORTHO05D007242 1.2e-82 310.8 228 68.4
FAN18G2518 Fragaria x ananassa HOM05D005964 ORTHO05D007242 1.5e-82 310.5 219 69.4
Gohir.A08G150100 Gossypium hirsutum HOM05D005964 ORTHO05D007242 1.5e-82 310.5 244 63.1
Nitab4.5_0000030g0090 Nicotiana tabacum HOM05D005964 ORTHO05D007242 2.6e-82 309.7 235 68.1
Eucgr.E01239 Eucalyptus grandis HOM05D005964 ORTHO05D007242 3.4e-82 309.3 224 67.9
Ciclev10002048m.g Citrus clementina HOM05D005964 ORTHO05D007242 4.4e-82 308.9 244 65.6
Eucgr.E01230 Eucalyptus grandis HOM05D005964 ORTHO05D007242 7.5e-82 308.1 224 67.4
FAN13G2421 Fragaria x ananassa HOM05D005964 ORTHO05D007242 7.5e-82 308.1 215 69.8
Nitab4.5_0002930g0010 Nicotiana tabacum HOM05D005964 ORTHO05D007242 1.3e-81 307.4 233 67.4
Sopen08g024420 Solanum pennellii HOM05D005964 ORTHO05D007242 7.0e-80 301.6 244 63.1
Potri.003G103000 Populus trichocarpa HOM05D005964 ORTHO05D007242 9.1e-80 301.2 222 66.2
Solyc08g075770.3 Solanum lycopersicum HOM05D005964 ORTHO05D007242 9.1e-80 301.2 244 63.1
Manes.17G003600 Manihot esculenta HOM05D005964 ORTHO05D007242 1.6e-79 300.4 216 67.1
Oeu046805.1 Olea europaea HOM05D005964 ORTHO05D007242 3.5e-79 299.3 247 60.7
CSS0036776 Camellia sinensis var. sinensis HOM05D005964 ORTHO05D007242 5.9e-79 298.5 176 77.3
Migut.E01349 Erythranthe guttata HOM05D005964 ORTHO05D007242 6.5e-78 295.0 233 63.1
CsaV3_3G001060 Cucumis sativus L. HOM05D005964 ORTHO05D007242 5.5e-77 292.0 243 61.7
PGR042G2449 Punica granatum HOM05D005964 ORTHO05D007242 7.2e-77 291.6 222 66.2
Sed0000446 Sechium edule HOM05D005964 ORTHO05D007242 9.4e-77 291.2 244 61.5
MELO3C013795.2 Cucumis melo HOM05D005964 ORTHO05D007242 1.6e-76 290.4 243 62.1
Rhsim07G0138900 Rhododendron simsii HOM05D005964 ORTHO05D007242 8.0e-76 288.1 320 49.1
Lsat_1_v5_gn_5_58981 Lactuca sativa HOM05D005964 ORTHO05D007242 1.2e-74 284.3 225 62.7
Thhalv10025843m.g Eutrema salsugineum HOM05D005964 ORTHO05D007242 9.8e-74 281.2 249 56.6
Aa31LG6G1830 Aethionema arabicum HOM05D005964 ORTHO05D007242 1.3e-73 280.8 261 54.4
HanXRQChr13g0412031 Helianthus annuus HOM05D005964 ORTHO05D007242 1.3e-73 280.8 243 56.8
Sp7g17840 Schrenkiella parvula HOM05D005964 ORTHO05D007242 2.2e-73 280.0 248 56.5
MSTRG.1771 Avicennia marina HOM05D005964 ORTHO05D007242 2.8e-73 279.6 252 56.7
AT4G19140 Arabidopsis thaliana HOM05D005964 ORTHO05D007242 4.9e-73 278.9 253 54.9
BcaNung03076 Brassica carinata HOM05D005964 ORTHO05D007242 6.3e-73 278.5 249 56.2
AL7G34950 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 1.8e-72 276.9 253 54.9
BcaC06g30611 Brassica carinata HOM05D005964 ORTHO05D007242 2.4e-72 276.6 253 56.1
BcaC09g51437 Brassica carinata HOM05D005964 ORTHO05D007242 2.4e-72 276.6 244 56.1
SGA_v2.0_scaffold111G31365 Striga asiatica HOM05D005964 ORTHO05D007242 4.1e-72 275.8 249 57.4
Carub.0007s2201 Capsella rubella HOM05D005964 ORTHO05D007242 5.4e-72 275.4 255 54.1
ECA240G3292 Erigeron canadensis HOM05D005964 ORTHO05D007242 9.1e-72 274.6 244 57.0
BcaNung04009 Brassica carinata HOM05D005964 ORTHO05D007242 2.0e-71 273.5 245 55.5
Glyma.09G213600 Glycine max HOM05D005964 ORTHO05D007242 2.7e-71 273.1 207 62.8
Hma1.2p1_0544F.1_g175510 Hydrangea macrophylla HOM05D005964 ORTHO05D007242 2.7e-71 273.1 195 68.7
Lalb_Chr05g0215451 Lupinus albus HOM05D005964 ORTHO05D007242 4.5e-71 272.3 247 57.1
Sc01g0007030 Simmondsia chinensis HOM05D005964 ORTHO05D007242 1.3e-70 270.8 202 66.8
TWI12G1028 Tripterygium wilfordii HOM05D005964 ORTHO05D007242 1.3e-70 270.8 203 66.0
BolC7t45529H Brassica oleracea HOM05D005964 ORTHO05D007242 3.8e-70 269.2 262 53.4
Glyma.01G149400 Glycine max HOM05D005964 ORTHO05D007242 5.0e-70 268.9 210 61.9
VMungo1215G0316 Vigna mungo HOM05D005964 ORTHO05D007242 6.6e-70 268.5 211 61.6
C01p13130 Brassica napus HOM05D005964 ORTHO05D007242 1.1e-69 267.7 256 53.5
BolC1t01286H Brassica oleracea HOM05D005964 ORTHO05D007242 1.1e-69 267.7 256 53.5
AUR62018605 Chenopodium quinoa HOM05D005964 ORTHO05D007242 1.9e-69 266.9 210 63.8
CARHR226010 Cardamine hirsuta HOM05D005964 ORTHO05D007242 2.5e-69 266.5 252 55.2
THA.LOC104811073 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 3.3e-69 266.2 249 55.8
Sabra03G0070200 Salix brachista HOM05D005964 ORTHO05D007242 4.2e-69 265.8 179 70.4
A01p11100 Brassica napus HOM05D005964 ORTHO05D007242 5.5e-69 265.4 255 53.3
BraA01t01056Z Brassica rapa HOM05D005964 ORTHO05D007242 5.5e-69 265.4 255 53.3
Nn1g02066 Nelumbo nucifera HOM05D005964 ORTHO05D007242 5.5e-69 265.4 197 68.5
arahy.Tifrunner.gnm1.ann1.NL6YXC Arachis hypogaea HOM05D005964 ORTHO05D007242 1.6e-68 263.8 246 54.1
arahy.Tifrunner.gnm1.ann1.PBCI2P Arachis hypogaea HOM05D005964 ORTHO05D007242 1.6e-68 263.8 246 54.1
HanXRQChr03g0081171 Helianthus annuus HOM05D005964 ORTHO05D007242 2.6e-66 256.5 241 55.6
EL10Ac5g11971 Beta vulgaris HOM05D005964 ORTHO05D007242 4.4e-66 255.8 218 59.2
SalBow8G2874 Salvia bowleyana HOM05D005964 ORTHO05D007242 4.4e-66 255.8 202 62.4
FAN18G4345 Fragaria x ananassa HOM05D005964 ORTHO05D007242 5.7e-66 255.4 171 73.7
unitig_899.g14736 Utricularia gibba HOM05D005964 ORTHO05D007242 1.7e-65 253.8 247 53.4
Lj2g0015502 Lotus japonicus HOM05D005964 ORTHO05D007242 2.2e-65 253.4 246 54.5
QL12p001050 Quercus lobata HOM05D005964 ORTHO05D007242 2.8e-65 253.1 153 79.7
Psat2g142160 Pisum sativum HOM05D005964 ORTHO05D007242 4.9e-65 252.3 239 54.4
DCAR_008183 Daucus carota HOM05D005964 ORTHO05D007242 1.8e-64 250.4 192 61.5
Medtr5g026860 Medicago truncatula HOM05D005964 ORTHO05D007242 2.4e-64 250.0 252 52.8
THA.LOC104806194 Tarenaya hassleriana HOM05D005964 ORTHO05D007242 4.1e-64 249.2 242 54.1
Phvul.002G128700 Phaseolus vulgaris HOM05D005964 ORTHO05D007242 3.5e-63 246.1 175 65.1
Sabra01G0101200 Salix brachista HOM05D005964 ORTHO05D007242 2.9e-62 243.0 206 60.2
MBI04_g27277_MAGBIO Magnolia biondii HOM05D005964 ORTHO05D007242 5.0e-62 242.3 248 53.6
PSO717G0069 Papaver somniferum HOM05D005964 ORTHO05D007242 6.6e-62 241.9 232 53.4
BraA03t14264Z Brassica rapa HOM05D005964 ORTHO05D007242 2.5e-61 240.0 244 51.6
TPR.G17260 Trifolium pratense HOM05D005964 ORTHO05D007242 4.3e-61 239.2 211 56.9
vmacro14234 Vaccinium macrocarpon HOM05D005964 ORTHO05D007242 2.1e-60 236.9 268 47.4
AUR62007382 Chenopodium quinoa HOM05D005964 ORTHO05D007242 6.1e-60 235.3 174 64.9
Aqoxy7G00888 Aquilegia oxysepala HOM05D005964 ORTHO05D007242 1.0e-59 234.6 225 55.1
MSTRG.13905 Avicennia marina HOM05D005964 ORTHO05D007242 5.2e-59 232.3 171 64.9
arahy.Tifrunner.gnm1.ann1.MDU2JP Arachis hypogaea HOM05D005964 ORTHO05D007242 8.9e-59 231.5 258 47.7
Hund11143 Selenicereus undatus HOM05D005964 ORTHO05D007242 2.2e-57 226.9 336 41.7
PSO675G7054 Papaver somniferum HOM05D005964 ORTHO05D007242 3.5e-55 219.5 204 55.9
ClCG10G001030 Citrullus lanatus HOM05D005964 ORTHO05D007242 2.1e-52 210.3 243 49.8
Os04g0600400 Oryza sativa ssp. japonica HOM05D005964 ORTHO05D007242 1.1e-51 208.0 209 53.6
C07p50270 Brassica napus HOM05D005964 ORTHO05D007242 6.8e-51 205.3 249 48.2
CDE12G0810 Ceratophyllum demersum HOM05D005964 ORTHO05D007242 8.9e-51 204.9 247 42.9
A03p51750 Brassica napus HOM05D005964 ORTHO05D007242 5.8e-50 202.2 251 47.4
Zm00001eb071860 Zea mays HOM05D005964 ORTHO05D007242 1.3e-49 201.1 231 48.5
ATR0829G145 Amborella trichopoda HOM05D005964 ORTHO05D007242 3.0e-46 189.9 174 52.9
SEGI_32375 Sequoiadendron giganteum HOM05D005964 ORTHO05D007242 4.0e-43 179.5 161 55.3
PGSC0003DMG400030871 Solanum tuberosum HOM05D005964 ORTHO05D007242 1.3e-38 164.5 129 61.2
Ah.12g055850 Amaranthus hybridus HOM05D005964 ORTHO05D007242 1.4e-35 154.5 124 59.7
PSO717G0022 Papaver somniferum HOM05D005964 ORTHO05D007242 3.1e-35 153.3 141 56.0
Cpa.g.sc90.42 Carica papaya HOM05D005964 ORTHO05D007242 5.6e-29 132.5 82 69.5
Mapoly0153s0025 Marchantia polymorpha HOM05D005964 ORTHO05D007242 3.2e-24 116.7 232 32.8
HPP92_021116 Vanilla planifolia HOM05D005964 ORTHO05D007242 9.3e-24 115.2 131 44.3
Pp3c6_11480 Physcomitrium patens HOM05D005964 ORTHO05D007242 1.8e-19 100.9 227 30.4
AL8G21390 Arabidopsis lyrata HOM05D005964 ORTHO05D007242 7.6e-18 95.5 105 43.8
Haze_08067 Corylus avellana HOM05D005964 ORTHO05D007242 1.1e-13 81.6 56 67.9
AagrBONN_evm.TU.Sc2ySwM_344.1651 Anthoceros agrestis HOM05D005964 ORTHO05D007242 7.4e-13 79.0 122 35.2
Haze_05991 Corylus avellana HOM05D005964 ORTHO05D007242 1.3e-12 78.2 134 41.0
Cpa.g.sc90.41 Carica papaya HOM05D005964 ORTHO05D007242 6.2e-12 75.9 44 77.3
Oeu042210.1 Olea europaea HOM05D005964 ORTHO05D007242 1.1e-11 75.1 50 66.0
CBR_g24057 Chara braunii HOM05D005964 ORTHO05D007242 1.8e-11 74.3 128 34.4
Cpa.g.c47778 Carica papaya HOM05D005964 ORTHO05D007242 2.6e-10 70.5 40 67.5


User provided reference genes

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