Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01022709001 Vitis vinifera HOM05D000141 ORTHO05D000780 1.1e-30 136.0 66 100.0
GSVIVG01028062001 Vitis vinifera HOM05D000141 ORTHO05D000780 9.8e-24 112.8 66 86.4
QL12p028601 Quercus lobata HOM05D000141 ORTHO05D000780 4.1e-14 80.9 66 63.6
Thecc.01G306900 Theobroma cacao HOM05D000141 ORTHO05D000780 2.0e-13 78.6 65 64.6
Duzib138G0041 Durio zibethinus HOM05D000141 ORTHO05D000780 1.0e-12 76.3 65 63.1
Duzib133G0990 Durio zibethinus HOM05D000141 ORTHO05D000780 1.7e-12 75.5 65 61.5
Manes.01G223400 Manihot esculenta HOM05D000141 ORTHO05D000780 1.7e-12 75.5 65 61.5
COL.COLO4_23295 Corchorus olitorius HOM05D000141 ORTHO05D000780 2.9e-12 74.7 65 63.1
Potri.014G125700 Populus trichocarpa HOM05D000141 ORTHO05D000780 6.6e-12 73.6 67 61.2
MELO3C017936.2 Cucumis melo HOM05D000141 ORTHO05D000780 3.3e-11 71.2 65 60.0
TAR362G0312 Trochodendron aralioides HOM05D000141 ORTHO05D000780 9.5e-11 69.7 64 60.9
Actinidia21428 Actinidia chinensis HOM05D000141 ORTHO05D000780 1.6e-10 68.9 64 57.8
Haze_04985 Corylus avellana HOM05D000141 ORTHO05D000780 2.1e-10 68.6 68 58.8
CsaV3_4G001020 Cucumis sativus L. HOM05D000141 ORTHO05D000780 2.1e-10 68.6 66 59.1
Gohir.D08G139200 Gossypium hirsutum HOM05D000141 ORTHO05D000780 3.6e-10 67.8 64 59.4
Gorai.004G142900 Gossypium raimondii HOM05D000141 ORTHO05D000780 3.6e-10 67.8 64 59.4
PGSC0003DMG400031822 Solanum tuberosum HOM05D000141 ORTHO05D000780 3.6e-10 67.8 66 56.1
Cfa005863 Carpinus fangiana HOM05D000141 ORTHO05D000780 6.1e-10 67.0 69 59.4
Actinidia33268 Actinidia chinensis HOM05D000141 ORTHO05D000780 3.1e-09 64.7 64 57.8
CAN.G862.57 Capsicum annuum HOM05D000141 ORTHO05D000780 3.1e-09 64.7 64 57.8
Gohir.A07G126500 Gossypium hirsutum HOM05D000141 ORTHO05D000780 4.0e-09 64.3 65 53.8
Gohir.D07G130600 Gossypium hirsutum HOM05D000141 ORTHO05D000780 4.0e-09 64.3 65 53.8
Gorai.001G141400 Gossypium raimondii HOM05D000141 ORTHO05D000780 4.0e-09 64.3 65 53.8
ClCG10G011150 Citrullus lanatus HOM05D000141 ORTHO05D000780 5.2e-09 63.9 66 59.1
Solyc09g075480.3 Solanum lycopersicum HOM05D000141 ORTHO05D000780 5.2e-09 63.9 66 54.5
Nn4g25696 Nelumbo nucifera HOM05D000141 ORTHO05D000780 6.8e-09 63.5 64 57.8
TAR633G0158 Trochodendron aralioides HOM05D000141 ORTHO05D000780 6.8e-09 63.5 64 57.8
Aqoxy2G02855 Aquilegia oxysepala HOM05D000141 ORTHO05D000780 1.2e-08 62.8 68 54.4
TAR365G0511 Trochodendron aralioides HOM05D000141 ORTHO05D000780 2.0e-08 62.0 64 59.4
Potri.002G201000 Populus trichocarpa HOM05D000141 ORTHO05D000780 2.6e-08 61.6 65 53.8
VMungo0720G0660 Vigna mungo HOM05D000141 ORTHO05D000780 2.6e-08 61.6 64 54.7
Ciclev10018670m.g Citrus clementina HOM05D000141 ORTHO05D000780 3.4e-08 61.2 60 55.0
Phvul.007G217400 Phaseolus vulgaris HOM05D000141 ORTHO05D000780 3.4e-08 61.2 66 54.5
PGR119G0334 Punica granatum HOM05D000141 ORTHO05D000780 5.8e-08 60.5 65 52.3
RcHm_v2.0_Chr6g0294551 Rosa chinensis HOM05D000141 ORTHO05D000780 5.8e-08 60.5 66 57.6
Sed0007120 Sechium edule HOM05D000141 ORTHO05D000780 5.8e-08 60.5 66 57.6
Sopen09g030270 Solanum pennellii HOM05D000141 ORTHO05D000780 5.8e-08 60.5 66 53.0
CANSAT80G1363 Cannabis sativa HOM05D000141 ORTHO05D000780 9.8e-08 59.7 66 60.6
Glyma.02G015500 Glycine max HOM05D000141 ORTHO05D000780 1.3e-07 59.3 66 53.0
TWI14G1074 Tripterygium wilfordii HOM05D000141 ORTHO05D000780 1.3e-07 59.3 68 52.9
Peaxi162Scf00001g03324 Petunia axillaris HOM05D000141 ORTHO05D000780 2.9e-07 58.2 62 56.5
Eucgr.H01079 Eucalyptus grandis HOM05D000141 ORTHO05D000780 3.7e-07 57.8 65 50.8
Gohir.A08G118200 Gossypium hirsutum HOM05D000141 ORTHO05D000780 4.9e-07 57.4 64 53.1
vmacro01537 Vaccinium macrocarpon HOM05D000141 ORTHO05D000780 4.9e-07 57.4 64 51.6
Phvul.001G210500 Phaseolus vulgaris HOM05D000141 ORTHO05D000780 8.3e-07 56.6 69 52.2
Lj5g0021671 Lotus japonicus HOM05D000141 ORTHO05D000780 1.1e-06 56.2 67 52.2
Lalb_Chr21g0309371 Lupinus albus HOM05D000141 ORTHO05D000780 1.1e-06 56.2 68 51.5
Rhsim13G0007800 Rhododendron simsii HOM05D000141 ORTHO05D000780 1.1e-06 56.2 65 53.8
Prupe.6G316600 Prunus persica HOM05D000141 ORTHO05D000780 1.4e-06 55.8 64 48.4
Actinidia16839 Actinidia chinensis HOM05D000141 ORTHO05D000780 3.2e-06 54.7 59 49.2
Hma1.2p1_1320F.1_g275320 Hydrangea macrophylla HOM05D000141 ORTHO05D000780 3.2e-06 54.7 65 47.7
Glyma.03G217000 Glycine max HOM05D000141 ORTHO05D000780 4.1e-06 54.3 68 54.4
Hma1.2p1_0472F.1_g159780 Hydrangea macrophylla HOM05D000141 ORTHO05D000780 4.1e-06 54.3 65 49.2
MD00G1140500 Malus domestica HOM05D000141 ORTHO05D000780 4.1e-06 54.3 65 52.3
VMungo1383G3583 Vigna mungo HOM05D000141 ORTHO05D000780 4.1e-06 54.3 69 50.7
Dinv33083 Davidia involucrata HOM05D000141 ORTHO05D000780 5.4e-06 53.9 67 47.8
FvH4_2g26160 Fragaria vesca HOM05D000141 ORTHO05D000780 5.4e-06 53.9 65 55.4
FAN20G0717 Fragaria x ananassa HOM05D000141 ORTHO05D000780 5.4e-06 53.9 65 55.4
Lalb_Chr02g0146561 Lupinus albus HOM05D000141 ORTHO05D000780 5.4e-06 53.9 62 53.2
Peaxi162Scf00147g00075 Petunia axillaris HOM05D000141 ORTHO05D000780 5.4e-06 53.9 64 51.6
Dinv30854 Davidia involucrata HOM05D000141 ORTHO05D000780 7.0e-06 53.5 64 48.4
Glyma.10G016000 Glycine max HOM05D000141 ORTHO05D000780 7.0e-06 53.5 67 52.2
Oeu054109.1 Olea europaea HOM05D000141 ORTHO05D000780 7.0e-06 53.5 65 52.3
CiPaw.08G092600 Carya illinoinensis HOM05D000141 ORTHO05D000780 9.2e-06 53.1 67 47.8


User provided reference genes

Program Settings