Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01022581001 Vitis vinifera HOM05D001091 ORTHO05D015841 2.7e-95 352.1 184 100.0
Cfa020062 Carpinus fangiana HOM05D001091 ORTHO05D001020 2.1e-23 113.2 181 41.4
Nn6g34617 Nelumbo nucifera HOM05D001091 ORTHO05D001020 4.6e-23 112.1 120 50.0
Haze_20136 Corylus avellana HOM05D001091 ORTHO05D001020 6.7e-22 108.2 181 40.9
TAR633G1177 Trochodendron aralioides HOM05D001091 ORTHO05D001020 8.2e-20 101.3 120 49.2
Manes.09G043300 Manihot esculenta HOM05D001091 ORTHO05D001020 1.8e-19 100.1 177 39.5
Aqoxy1G00611 Aquilegia oxysepala HOM05D001091 ORTHO05D001020 5.3e-19 98.6 100 51.0
ClCG10G018140 Citrullus lanatus HOM05D001091 ORTHO05D001020 5.3e-19 98.6 169 40.2
COL.COLO4_29522 Corchorus olitorius HOM05D001091 ORTHO05D001020 2.0e-18 96.7 172 37.8
MELO3C009559.2 Cucumis melo HOM05D001091 ORTHO05D001020 7.7e-18 94.7 161 39.8
CsaV3_3G038160 Cucumis sativus L. HOM05D001091 ORTHO05D001020 7.7e-18 94.7 161 39.8
arahy.Tifrunner.gnm1.ann1.UW76F4 Arachis hypogaea HOM05D001091 ORTHO05D001020 1.0e-17 94.4 175 40.0
arahy.Tifrunner.gnm1.ann1.6V7NNJ Arachis hypogaea HOM05D001091 ORTHO05D001020 2.2e-17 93.2 175 39.4
GSVIVG01037531001 Vitis vinifera HOM05D001091 ORTHO05D001020 1.4e-16 90.5 92 51.1
EL10Ac7g16275 Beta vulgaris HOM05D001091 ORTHO05D001020 3.2e-16 89.4 101 44.6
ClCG02G022500 Citrullus lanatus HOM05D001091 ORTHO05D001020 3.2e-16 89.4 94 47.9
Duzib168G0067 Durio zibethinus HOM05D001091 ORTHO05D001020 3.2e-16 89.4 96 49.0
Hma1.2p1_0101F.1_g049670 Hydrangea macrophylla HOM05D001091 ORTHO05D001020 4.2e-16 89.0 117 43.6
CiPaw.13G126800 Carya illinoinensis HOM05D001091 ORTHO05D001020 5.5e-16 88.6 104 41.3
Lj2C949G1 Lonicera japonica HOM05D001091 ORTHO05D001020 5.5e-16 88.6 99 47.5
Thecc.09G267800 Theobroma cacao HOM05D001091 ORTHO05D001020 1.2e-15 87.4 105 42.9
CSS0046714 Camellia sinensis var. sinensis HOM05D001091 ORTHO05D015841 1.6e-15 87.0 94 51.1
TWI74G0943 Tripterygium wilfordii HOM05D001091 ORTHO05D001020 1.6e-15 87.0 158 35.4
Sc21g0006730 Simmondsia chinensis HOM05D001091 ORTHO05D001020 3.6e-15 85.9 135 40.7
TPR.G25811 Trifolium pratense HOM05D001091 ORTHO05D001020 3.6e-15 85.9 175 38.3
TWI79G0355 Tripterygium wilfordii HOM05D001091 ORTHO05D001020 3.6e-15 85.9 90 50.0
QL07p027131 Quercus lobata HOM05D001091 ORTHO05D001020 4.7e-15 85.5 183 38.3
AUR62020212 Chenopodium quinoa HOM05D001091 ORTHO05D001020 6.1e-15 85.1 99 47.5
Eucgr.J00586 Eucalyptus grandis HOM05D001091 ORTHO05D001020 6.1e-15 85.1 97 47.4
Duzib150G0688 Durio zibethinus HOM05D001091 ORTHO05D001020 7.9e-15 84.7 105 41.9
Lj1g0016178 Lotus japonicus HOM05D001091 ORTHO05D001020 7.9e-15 84.7 176 39.8
AUR62001573 Chenopodium quinoa HOM05D001091 ORTHO05D001020 1.0e-14 84.3 99 47.5
CsaV3_6G038640 Cucumis sativus L. HOM05D001091 ORTHO05D001020 1.0e-14 84.3 94 44.7
Lalb_Chr19g0136151 Lupinus albus HOM05D001091 ORTHO05D001020 1.0e-14 84.3 93 49.5
Oeu048823.1 Olea europaea HOM05D001091 ORTHO05D001020 1.4e-14 84.0 93 45.2
Hund18804 Selenicereus undatus HOM05D001091 ORTHO05D001020 1.4e-14 84.0 94 47.9
MELO3C014526.2 Cucumis melo HOM05D001091 ORTHO05D001020 1.8e-14 83.6 94 45.7
Ah.08g222100 Amaranthus hybridus HOM05D001091 ORTHO05D001020 2.3e-14 83.2 110 40.0
COL.COLO4_00161 Corchorus olitorius HOM05D001091 ORTHO05D001020 2.3e-14 83.2 94 44.7
PSO339G5290 Papaver somniferum HOM05D001091 ORTHO05D001020 2.3e-14 83.2 94 46.8
PSO384G3742 Papaver somniferum HOM05D001091 ORTHO05D001020 2.3e-14 83.2 94 46.8
Phvul.001G197200 Phaseolus vulgaris HOM05D001091 ORTHO05D001020 2.3e-14 83.2 173 38.7
Ciclev10027791m.g Citrus clementina HOM05D001091 ORTHO05D001020 3.0e-14 82.8 97 45.4
Gohir.A09G101100 Gossypium hirsutum HOM05D001091 ORTHO05D001020 3.0e-14 82.8 94 44.7
Sed0027161 Sechium edule HOM05D001091 ORTHO05D001020 3.0e-14 82.8 148 39.2
Atru.chr3.3075 Acer truncatum HOM05D001091 ORTHO05D001020 3.9e-14 82.4 96 45.8
Atru.chr3.3090 Acer truncatum HOM05D001091 ORTHO05D009271 3.9e-14 82.4 96 45.8
Gorai.006G117900 Gossypium raimondii HOM05D001091 ORTHO05D001020 3.9e-14 82.4 94 44.7
Solyc06g073930.4 Solanum lycopersicum HOM05D001091 ORTHO05D001020 3.9e-14 82.4 107 37.4
Sopen06g030330 Solanum pennellii HOM05D001091 ORTHO05D001020 3.9e-14 82.4 107 37.4
SHI25267 Sapria himalayana HOM05D001091 ORTHO05D001020 5.1e-14 82.0 109 40.4
TWI31G0595 Tripterygium wilfordii HOM05D001091 ORTHO05D001020 5.1e-14 82.0 92 46.7
TAR636G1693 Trochodendron aralioides HOM05D001091 ORTHO05D001020 5.1e-14 82.0 87 49.4
Lsat_1_v5_gn_6_34761 Lactuca sativa HOM05D001091 ORTHO05D001020 6.7e-14 81.6 164 36.0
MD03G1159600 Malus domestica HOM05D001091 ORTHO05D001020 6.7e-14 81.6 94 42.6
PGR119G1581 Punica granatum HOM05D001091 ORTHO05D001020 6.7e-14 81.6 94 44.7
RcHm_v2.0_Chr5g0049121 Rosa chinensis HOM05D001091 ORTHO05D001020 6.7e-14 81.6 95 46.3
CSS0019153 Camellia sinensis var. sinensis HOM05D001091 ORTHO05D015841 8.8e-14 81.3 94 47.9
DCAR_006189 Daucus carota HOM05D001091 ORTHO05D001020 8.8e-14 81.3 109 44.0
Gohir.D09G100500 Gossypium hirsutum HOM05D001091 ORTHO05D001020 8.8e-14 81.3 94 43.6
Gohir.D09G129200 Gossypium hirsutum HOM05D001091 ORTHO05D001020 8.8e-14 81.3 110 41.8
Gorai.006G147900 Gossypium raimondii HOM05D001091 ORTHO05D001020 8.8e-14 81.3 110 41.8
Manes.11G103600 Manihot esculenta HOM05D001091 ORTHO05D001020 8.8e-14 81.3 95 44.2
Potri.001G214800 Populus trichocarpa HOM05D001091 ORTHO05D001020 8.8e-14 81.3 95 42.1
Prupe.6G147300 Prunus persica HOM05D001091 ORTHO05D001020 8.8e-14 81.3 94 42.6
Thecc.05G108000 Theobroma cacao HOM05D001091 ORTHO05D001020 8.8e-14 81.3 110 42.7
Ciclev10012460m.g Citrus clementina HOM05D001091 ORTHO05D001020 1.1e-13 80.9 167 35.3
THA.LOC104810942 Tarenaya hassleriana HOM05D001091 ORTHO05D001020 1.1e-13 80.9 111 40.5
MD11G1174900 Malus domestica HOM05D001091 ORTHO05D001020 1.5e-13 80.5 94 42.6
FAN16G2369 Fragaria x ananassa HOM05D001091 ORTHO05D001020 2.0e-13 80.1 109 40.4
TPR.G4164 Trifolium pratense HOM05D001091 ORTHO05D001020 2.0e-13 80.1 108 38.9
Gohir.A09G132900 Gossypium hirsutum HOM05D001091 ORTHO05D001020 2.6e-13 79.7 110 41.8
FvH4_3g26140 Fragaria vesca HOM05D001091 ORTHO05D001020 3.3e-13 79.3 98 43.9
Medtr2g087710 Medicago truncatula HOM05D001091 ORTHO05D001020 3.3e-13 79.3 92 43.5
Sabra16G0128400 Salix brachista HOM05D001091 ORTHO05D001020 3.3e-13 79.3 95 41.1
Sed0022355 Sechium edule HOM05D001091 ORTHO05D001020 3.3e-13 79.3 111 41.4
FAN21G3893 Fragaria x ananassa HOM05D001091 ORTHO05D001020 4.4e-13 79.0 98 42.9
THA.LOC104799571 Tarenaya hassleriana HOM05D001091 ORTHO05D001020 4.4e-13 79.0 114 42.1
arahy.Tifrunner.gnm1.ann1.KRDC8H Arachis hypogaea HOM05D001091 ORTHO05D001020 5.7e-13 78.6 103 43.7
arahy.Tifrunner.gnm1.ann1.ZKTD7I Arachis hypogaea HOM05D001091 ORTHO05D001020 5.7e-13 78.6 103 43.7
CDE10G0151 Ceratophyllum demersum HOM05D001091 ORTHO05D001020 5.7e-13 78.6 97 45.4
Ca_01624_v3 Cicer arietinum L. HOM05D001091 ORTHO05D001020 5.7e-13 78.6 93 44.1
Duzib128G1052 Durio zibethinus HOM05D001091 ORTHO05D001020 5.7e-13 78.6 109 41.3
Rhsim13G0198100 Rhododendron simsii HOM05D001091 ORTHO05D001020 5.7e-13 78.6 96 43.8
VMungo1383G3391 Vigna mungo HOM05D001091 ORTHO05D001020 5.7e-13 78.6 173 38.7
Cfa010206 Carpinus fangiana HOM05D001091 ORTHO05D001020 7.4e-13 78.2 93 39.8
Psat5g262560 Pisum sativum HOM05D001091 ORTHO05D001020 7.4e-13 78.2 116 37.9
FAN11G0955 Fragaria x ananassa HOM05D001091 ORTHO05D001020 9.7e-13 77.8 98 43.9
HanXRQChr02g0053321 Helianthus annuus HOM05D001091 ORTHO05D001020 9.7e-13 77.8 159 39.6
MBI05_g36783_MAGBIO Magnolia biondii HOM05D001091 ORTHO05D001020 1.3e-12 77.4 91 47.3
MD12G1043100 Malus domestica HOM05D001091 ORTHO05D001020 1.3e-12 77.4 179 35.8
Sabra06G0154800 Salix brachista HOM05D001091 ORTHO05D001020 2.2e-12 76.6 179 33.5
BcaB08g36457 Brassica carinata HOM05D001091 ORTHO05D001020 2.8e-12 76.3 94 43.6
CARHR191500 Cardamine hirsuta HOM05D001091 ORTHO05D001020 2.8e-12 76.3 94 44.7
BcaC04g19537 Brassica carinata HOM05D001091 ORTHO05D015841 3.7e-12 75.9 94 44.7
C09p54650 Brassica napus HOM05D001091 ORTHO05D001020 3.7e-12 75.9 94 44.7
Lalb_Chr20g0111281 Lupinus albus HOM05D001091 ORTHO05D001020 3.7e-12 75.9 175 37.7
Cpa.g.sc104.6 Carica papaya HOM05D001091 ORTHO05D001020 6.3e-12 75.1 184 34.2
Cc01_g07850 Coffea canephora HOM05D001091 ORTHO05D001020 6.3e-12 75.1 93 44.1
Thhalv10012650m.g Eutrema salsugineum HOM05D001091 ORTHO05D001020 6.3e-12 75.1 94 44.7
FAN25G1894 Fragaria x ananassa HOM05D001091 ORTHO05D001020 6.3e-12 75.1 98 41.8
A10p18710 Brassica napus HOM05D001091 ORTHO05D001020 8.2e-12 74.7 99 41.4
BolC3t13686H Brassica oleracea HOM05D001091 ORTHO05D001020 8.2e-12 74.7 96 42.7
Lalb_Chr01g0005811 Lupinus albus HOM05D001091 ORTHO05D001020 8.2e-12 74.7 93 45.2
Phvul.005G117700 Phaseolus vulgaris HOM05D001091 ORTHO05D001020 8.2e-12 74.7 94 42.6
Carub.0006s1967 Capsella rubella HOM05D001091 ORTHO05D001020 1.1e-11 74.3 94 43.6
Ca_09067_v3 Cicer arietinum L. HOM05D001091 ORTHO05D001020 1.1e-11 74.3 128 36.7
QL01p019208 Quercus lobata HOM05D001091 ORTHO05D015841 1.1e-11 74.3 103 38.8
MSTRG.18797 Avicennia marina HOM05D001091 ORTHO05D001020 1.4e-11 73.9 92 45.7
Glyma.12G190400 Glycine max HOM05D001091 ORTHO05D001020 1.4e-11 73.9 95 41.1
Sp6g23160 Schrenkiella parvula HOM05D001091 ORTHO05D001020 1.4e-11 73.9 94 43.6
Nitab4.5_0000875g0120 Nicotiana tabacum HOM05D001091 ORTHO05D001020 1.8e-11 73.6 99 39.4
vmacro04051 Vaccinium macrocarpon HOM05D001091 ORTHO05D001020 1.8e-11 73.6 110 38.2
C03p12130 Brassica napus HOM05D001091 ORTHO05D001020 2.4e-11 73.2 95 43.2
Lj3g0006295 Lotus japonicus HOM05D001091 ORTHO05D001020 3.1e-11 72.8 95 42.1
Prupe.7G091700 Prunus persica HOM05D001091 ORTHO05D001020 3.1e-11 72.8 185 38.4
Atru.chr8.1306 Acer truncatum HOM05D001091 ORTHO05D001020 4.1e-11 72.4 88 42.0
AL6G32990 Arabidopsis lyrata HOM05D001091 ORTHO05D001020 4.1e-11 72.4 94 43.6
VMungo1080G0672 Vigna mungo HOM05D001091 ORTHO05D001020 4.1e-11 72.4 94 41.5
AT5G22030 Arabidopsis thaliana HOM05D001091 ORTHO05D001020 5.3e-11 72.0 110 40.9
arahy.Tifrunner.gnm1.ann1.RIT83U Arachis hypogaea HOM05D001091 ORTHO05D001020 5.3e-11 72.0 95 37.9
CDE10G1029 Ceratophyllum demersum HOM05D001091 ORTHO05D001020 5.3e-11 72.0 97 42.3
arahy.Tifrunner.gnm1.ann1.X1RCBJ Arachis hypogaea HOM05D001091 ORTHO05D001020 7.0e-11 71.6 95 37.9
BolC9t58330H Brassica oleracea HOM05D001091 ORTHO05D001020 7.0e-11 71.6 93 44.1
CAN.G1463.15 Capsicum annuum HOM05D001091 ORTHO05D001020 7.0e-11 71.6 107 38.3
Glyma.13G311300 Glycine max HOM05D001091 ORTHO05D001020 7.0e-11 71.6 94 40.4
Peaxi162Scf00098g00113 Petunia axillaris HOM05D001091 ORTHO05D001020 7.0e-11 71.6 108 37.0
unitig_899.g15383 Utricularia gibba HOM05D001091 ORTHO05D015841 7.0e-11 71.6 94 43.6
A03p10540 Brassica napus HOM05D001091 ORTHO05D001020 9.1e-11 71.2 95 43.2
BraA03t10366Z Brassica rapa HOM05D001091 ORTHO05D001020 9.1e-11 71.2 95 43.2
Potri.006G201100 Populus trichocarpa HOM05D001091 ORTHO05D001020 9.1e-11 71.2 181 32.0
BraA10t43951Z Brassica rapa HOM05D001091 ORTHO05D001020 1.2e-10 70.9 98 40.8
Nitab4.5_0003657g0030 Nicotiana tabacum HOM05D001091 ORTHO05D001020 1.2e-10 70.9 99 39.4
MD14G1042200 Malus domestica HOM05D001091 ORTHO05D001020 1.6e-10 70.5 181 35.9
Aa31LG1G13370 Aethionema arabicum HOM05D001091 ORTHO05D001020 2.0e-10 70.1 94 42.6
CSS0002029 Camellia sinensis var. sinensis HOM05D001091 ORTHO05D001020 2.0e-10 70.1 174 35.6
CSS0017286 Camellia sinensis var. sinensis HOM05D001091 ORTHO05D001020 2.0e-10 70.1 174 35.6
MSTRG.21007 Avicennia marina HOM05D001091 ORTHO05D001020 3.5e-10 69.3 93 44.1
BcaB01g04748 Brassica carinata HOM05D001091 ORTHO05D001020 3.5e-10 69.3 96 41.7
ECA233G5061 Erigeron canadensis HOM05D001091 ORTHO05D001020 3.5e-10 69.3 91 45.1
FAN05G4225 Fragaria x ananassa HOM05D001091 ORTHO05D001020 3.5e-10 69.3 194 31.4
Actinidia37764 Actinidia chinensis HOM05D001091 ORTHO05D001020 4.5e-10 68.9 164 36.6
FAN05G5163 Fragaria x ananassa HOM05D001091 ORTHO05D001020 4.5e-10 68.9 194 31.4
FAN02G3563 Fragaria x ananassa HOM05D001091 ORTHO05D001020 5.9e-10 68.6 194 31.4
Medtr7g106570 Medicago truncatula HOM05D001091 ORTHO05D001020 1.0e-09 67.8 87 41.4
Dinv18857 Davidia involucrata HOM05D001091 ORTHO05D001020 1.3e-09 67.4 66 51.5
FAN09G4836 Fragaria x ananassa HOM05D001091 ORTHO05D001020 1.3e-09 67.4 194 31.4
FAN14G4036 Fragaria x ananassa HOM05D001091 ORTHO05D001020 1.3e-09 67.4 194 31.4
Rhsim03G0059600 Rhododendron simsii HOM05D001091 ORTHO05D001020 1.3e-09 67.4 175 35.4
Hund10841 Selenicereus undatus HOM05D001091 ORTHO05D001020 1.3e-09 67.4 193 33.7
Migut.D02381 Erythranthe guttata HOM05D001091 ORTHO05D001020 1.7e-09 67.0 92 39.1
Lsat_1_v5_gn_2_35221 Lactuca sativa HOM05D001091 ORTHO05D001020 2.2e-09 66.6 105 38.1
RcHm_v2.0_Chr3g0476581 Rosa chinensis HOM05D001091 ORTHO05D001020 3.8e-09 65.9 86 43.0
SalBow6G2883 Salvia bowleyana HOM05D001091 ORTHO05D001020 3.8e-09 65.9 98 37.8
HPP92_028256 Vanilla planifolia HOM05D001091 ORTHO05D001020 6.5e-09 65.1 96 37.5
ATR0697G235 Amborella trichopoda HOM05D001091 ORTHO05D001020 8.5e-09 64.7 93 43.0
SGA_v2.0_scaffold7G04006 Striga asiatica HOM05D001091 ORTHO05D001020 1.1e-08 64.3 92 41.3
Lalb_Chr01g0017791 Lupinus albus HOM05D001091 ORTHO05D001020 1.5e-08 63.9 87 40.2
PGR004G1296 Punica granatum HOM05D001091 ORTHO05D001020 1.9e-08 63.5 159 34.0
Glyma.19G201100 Glycine max HOM05D001091 ORTHO05D001020 3.2e-08 62.8 151 35.1
vmacro07507 Vaccinium macrocarpon HOM05D001091 ORTHO05D001020 1.2e-07 60.8 93 40.9
BcaNung07296 Brassica carinata HOM05D001091 ORTHO05D001020 1.6e-07 60.5 70 48.6
BcaC01g06610 Brassica carinata HOM05D001091 ORTHO05D001020 2.7e-07 59.7 72 44.4
HanXRQChr17g0561191 Helianthus annuus HOM05D001091 ORTHO05D001020 2.7e-07 59.7 90 40.0
Glyma.03G203700 Glycine max HOM05D001091 ORTHO05D001020 3.6e-07 59.3 175 34.9
vmacro22680 Vaccinium macrocarpon HOM05D001091 ORTHO05D015841 6.1e-07 58.5 84 39.3
Lalb_Chr25g0287901 Lupinus albus HOM05D001091 ORTHO05D001020 1.8e-06 57.0 103 35.9
HanXRQChr13g0398631 Helianthus annuus HOM05D001091 ORTHO05D015841 6.7e-06 55.1 78 38.5


User provided reference genes

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