Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01022502001 Vitis vinifera HOM05D007071 ORTHO05D008677 1.3e-183 646.4 345 100.0
Nn2g14444 Nelumbo nucifera HOM05D007071 ORTHO05D008677 1.7e-87 327.0 323 58.5
Actinidia37784 Actinidia chinensis HOM05D007071 ORTHO05D008677 2.2e-87 326.6 313 59.4
Manes.08G038400 Manihot esculenta HOM05D007071 ORTHO05D008677 1.5e-86 323.9 326 59.5
TWI77G0807 Tripterygium wilfordii HOM05D007071 ORTHO05D008677 5.7e-83 312.0 325 55.1
Dinv25088 Davidia involucrata HOM05D007071 ORTHO05D008677 3.1e-81 306.2 298 58.7
Potri.016G064200 Populus trichocarpa HOM05D007071 ORTHO05D008677 8.6e-79 298.1 322 52.2
Cpa.g.sc222.1 Carica papaya HOM05D007071 ORTHO05D008677 2.5e-78 296.6 324 51.9
Aqoxy2G00613 Aquilegia oxysepala HOM05D007071 ORTHO05D008677 3.3e-78 296.2 320 53.4
PSO339G2219 Papaver somniferum HOM05D007071 ORTHO05D008677 5.6e-78 295.4 323 52.9
vmacro07528 Vaccinium macrocarpon HOM05D007071 ORTHO05D008677 2.8e-77 293.1 333 53.8
Duzib093G1750 Durio zibethinus HOM05D007071 ORTHO05D008677 3.6e-77 292.7 315 54.0
Rhsim03G0057500 Rhododendron simsii HOM05D007071 ORTHO05D008677 8.9e-76 288.1 275 58.9
Lj1g0020560 Lotus japonicus HOM05D007071 ORTHO05D008677 3.4e-75 286.2 315 53.3
QL07p025881 Quercus lobata HOM05D007071 ORTHO05D008677 3.4e-75 286.2 315 56.8
Glyma.19G203500 Glycine max HOM05D007071 ORTHO05D008677 7.5e-75 285.0 307 52.4
CiPaw.09G025100 Carya illinoinensis HOM05D007071 ORTHO05D008677 1.3e-74 284.3 312 55.1
Cfa020101 Carpinus fangiana HOM05D007071 ORTHO05D008677 4.9e-74 282.3 308 53.2
MBI11_g24568_MAGBIO Magnolia biondii HOM05D007071 ORTHO05D008677 1.4e-73 280.8 372 46.8
Gorai.006G146400 Gossypium raimondii HOM05D007071 ORTHO05D008677 4.1e-73 279.3 313 50.8
Glyma.03G206000 Glycine max HOM05D007071 ORTHO05D008677 4.6e-72 275.8 305 51.5
Atru.chr8.1251 Acer truncatum HOM05D007071 ORTHO05D008677 7.8e-72 275.0 295 53.9
Gohir.D09G127800 Gossypium hirsutum HOM05D007071 ORTHO05D008677 1.7e-71 273.9 313 51.1
Sabra16G0066300 Salix brachista HOM05D007071 ORTHO05D008677 1.7e-71 273.9 374 45.5
Gohir.A09G131600 Gossypium hirsutum HOM05D007071 ORTHO05D008677 3.0e-71 273.1 313 50.5
Medtr7g107150 Medicago truncatula HOM05D007071 ORTHO05D008677 5.0e-71 272.3 304 54.9
VMungo1383G1243 Vigna mungo HOM05D007071 ORTHO05D008677 5.0e-71 272.3 311 51.1
FvH4_6g21190 Fragaria vesca HOM05D007071 ORTHO05D008677 1.5e-70 270.8 299 57.5
MELO3C009585.2 Cucumis melo HOM05D007071 ORTHO05D008677 2.1e-69 266.9 326 50.0
PGR004G1089 Punica granatum HOM05D007071 ORTHO05D008677 2.8e-69 266.5 318 52.2
CANSAT64G1821 Cannabis sativa HOM05D007071 ORTHO05D008677 3.6e-69 266.2 311 50.5
CsaV3_3G038410 Cucumis sativus L. HOM05D007071 ORTHO05D008677 8.0e-69 265.0 326 49.4
RcHm_v2.0_Chr3g0477671 Rosa chinensis HOM05D007071 ORTHO05D008677 1.1e-68 264.6 309 56.0
MD14G1046200 Malus domestica HOM05D007071 ORTHO05D008677 4.4e-67 259.2 311 55.9
Prupe.7G088000 Prunus persica HOM05D007071 ORTHO05D008677 7.5e-67 258.5 312 54.8
Sopen01g021160 Solanum pennellii HOM05D007071 ORTHO05D008677 9.8e-67 258.1 301 53.2
ECA248G1335 Erigeron canadensis HOM05D007071 ORTHO05D008677 2.2e-66 256.9 296 50.3
Sc01g0005210 Simmondsia chinensis HOM05D007071 ORTHO05D008677 1.1e-65 254.6 323 46.4
Sed0020351 Sechium edule HOM05D007071 ORTHO05D008677 1.4e-65 254.2 317 48.6
TAR633G1119 Trochodendron aralioides HOM05D007071 ORTHO05D008677 2.7e-64 250.0 235 58.3
Sp6g36270 Schrenkiella parvula HOM05D007071 ORTHO05D008677 2.3e-63 246.9 329 45.6
Phvul.001G199700 Phaseolus vulgaris HOM05D007071 ORTHO05D008677 5.0e-63 245.7 320 47.2
TPR.G14411 Trifolium pratense HOM05D007071 ORTHO05D008677 6.6e-63 245.4 268 54.9
ClCG10G017880 Citrullus lanatus HOM05D007071 ORTHO05D008677 2.5e-62 243.4 385 43.1
HanXRQChr11g0347671 Helianthus annuus HOM05D007071 ORTHO05D008677 1.2e-61 241.1 303 49.2
THA.LOC104809942 Tarenaya hassleriana HOM05D007071 ORTHO05D008677 2.1e-61 240.4 315 46.3
MSTRG.5919 Avicennia marina HOM05D007071 ORTHO05D008677 6.2e-61 238.8 296 48.3
Lalb_Chr25g0287781 Lupinus albus HOM05D007071 ORTHO05D008677 6.2e-61 238.8 318 50.9
Psat3g026600 Pisum sativum HOM05D007071 ORTHO05D008677 1.8e-60 237.3 300 51.0
Aa31sc291G40 Aethionema arabicum HOM05D007071 ORTHO05D008677 2.3e-60 236.9 316 46.5
Migut.J00748 Erythranthe guttata HOM05D007071 ORTHO05D008677 5.2e-60 235.7 297 50.8
FAN09G1879 Fragaria x ananassa HOM05D007071 ORTHO05D008677 1.5e-59 234.2 279 53.4
SGA_v2.0_scaffold31G12809 Striga asiatica HOM05D007071 ORTHO05D008677 1.5e-59 234.2 295 47.5
arahy.Tifrunner.gnm1.ann1.B8MRUG Arachis hypogaea HOM05D007071 ORTHO05D008677 2.0e-59 233.8 296 52.0
arahy.Tifrunner.gnm1.ann1.P13BQJ Arachis hypogaea HOM05D007071 ORTHO05D008677 5.8e-59 232.3 296 50.0
Thhalv10014151m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 1.3e-58 231.1 315 44.1
BolC9t59762H Brassica oleracea HOM05D007071 ORTHO05D008677 2.9e-58 229.9 314 43.9
Ciclev10012576m.g Citrus clementina HOM05D007071 ORTHO05D008677 2.9e-58 229.9 252 52.4
COL.COLO4_29462 Corchorus olitorius HOM05D007071 ORTHO05D008677 2.9e-58 229.9 248 54.0
Peaxi162Scf00645g00018 Petunia axillaris HOM05D007071 ORTHO05D008677 6.4e-58 228.8 295 47.1
Nitab4.5_0000117g0100 Nicotiana tabacum HOM05D007071 ORTHO05D008677 8.3e-58 228.4 337 45.1
Peaxi162Scf00425g00036 Petunia axillaris HOM05D007071 ORTHO05D008677 8.3e-58 228.4 295 47.1
A10p29800 Brassica napus HOM05D007071 ORTHO05D008677 1.1e-57 228.0 313 43.5
C09p70180 Brassica napus HOM05D007071 ORTHO05D008677 1.1e-57 228.0 314 43.0
Carub.0006s0547 Capsella rubella HOM05D007071 ORTHO05D008677 1.9e-57 227.3 313 43.8
AL6G16680 Arabidopsis lyrata HOM05D007071 ORTHO05D008677 2.4e-57 226.9 316 44.9
AT5G06590 Arabidopsis thaliana HOM05D007071 ORTHO05D008677 3.2e-57 226.5 319 44.8
BraA10t45019Z Brassica rapa HOM05D007071 ORTHO05D008677 1.6e-56 224.2 313 42.8
FAN14G3447 Fragaria x ananassa HOM05D007071 ORTHO05D008677 3.5e-56 223.0 269 54.3
Lsat_1_v5_gn_1_56481 Lactuca sativa HOM05D000137 ORTHO05D000503 4.6e-56 222.6 258 51.2
ATR0697G054 Amborella trichopoda HOM05D007071 ORTHO05D008677 3.9e-55 219.5 356 39.6
CARHR206610 Cardamine hirsuta HOM05D007071 ORTHO05D008677 6.6e-55 218.8 326 43.6
Ah.12g059560 Amaranthus hybridus HOM05D007071 ORTHO05D008677 5.6e-54 215.7 307 45.6
Oeu028127.1 Olea europaea HOM05D007071 ORTHO05D008677 1.1e-52 211.5 233 51.1
Haze_20090 Corylus avellana HOM05D007071 ORTHO05D008677 2.6e-51 206.8 248 49.6
CSS0047921 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 5.8e-51 205.7 236 56.8
Hund10779 Selenicereus undatus HOM05D007071 ORTHO05D008677 2.2e-50 203.8 310 45.2
Cc06_g07070 Coffea canephora HOM05D007071 ORTHO05D008677 3.8e-50 203.0 299 42.5
Thhalv10014358m.g Eutrema salsugineum HOM05D007071 ORTHO05D008677 4.9e-50 202.6 302 42.1
Nitab4.5_0005508g0020 Nicotiana tabacum HOM05D007071 ORTHO05D008677 4.9e-50 202.6 281 44.8
Solyc01g056990.3 Solanum lycopersicum HOM05D007071 ORTHO05D008677 1.2e-48 198.0 248 48.4
Thecc.05G182200 Theobroma cacao HOM05D007071 ORTHO05D008677 1.0e-47 194.9 202 53.5
PGSC0003DMG400031498 Solanum tuberosum HOM05D007071 ORTHO05D008677 1.7e-47 194.1 266 46.2
EL10Ac5g11787 Beta vulgaris HOM05D007071 ORTHO05D008677 3.9e-47 193.0 279 44.8
Eucgr.A02532 Eucalyptus grandis HOM05D007071 ORTHO05D008677 3.6e-45 186.4 222 49.1
Peaxi162Scf00414g00006 Petunia axillaris HOM05D007071 ORTHO05D008677 1.2e-43 181.4 297 41.8
AUR62036298 Chenopodium quinoa HOM05D007071 ORTHO05D008677 1.3e-39 167.9 305 40.3
AUR62038410 Chenopodium quinoa HOM05D000573 ORTHO05D008677 5.1e-39 166.0 305 40.3
CDE10G1223 Ceratophyllum demersum HOM05D007071 ORTHO05D008677 3.3e-38 163.3 183 57.4
DCAR_020676 Daucus carota HOM05D007071 ORTHO05D008677 3.1e-36 156.8 169 51.5
SEGI_27522 Sequoiadendron giganteum HOM05D007071 ORTHO05D008677 6.4e-34 149.1 366 31.7
Gorai.007G240500 Gossypium raimondii HOM05D007071 ORTHO05D008677 8.7e-31 138.7 170 48.2
Eucgr.C00285 Eucalyptus grandis HOM05D007071 ORTHO05D008677 4.0e-28 129.8 80 73.8
Zm00001eb134480 Zea mays HOM05D007071 ORTHO05D008677 2.9e-26 123.6 245 33.9
SHI31768 Sapria himalayana HOM05D007071 ORTHO05D008677 6.4e-26 122.5 109 56.0
Gohir.A07G089166 Gossypium hirsutum HOM05D007071 ORTHO05D008677 6.0e-24 115.9 80 67.5
Gohir.A06G128402 Gossypium hirsutum HOM05D007071 ORTHO05D008677 8.2e-21 105.5 156 41.7
AagrBONN_evm.TU.Sc2ySwM_117.1490 Anthoceros agrestis HOM05D007071 ORTHO05D008677 2.6e-19 100.5 324 28.1
Gohir.A07G056200 Gossypium hirsutum HOM05D007071 ORTHO05D008677 2.5e-17 94.0 118 45.8
MD12G1047800 Malus domestica HOM05D007071 ORTHO05D008677 3.2e-17 93.6 86 60.5
Eucgr.A02531 Eucalyptus grandis HOM05D007071 ORTHO05D008677 6.7e-15 85.9 74 64.9
TPR.G40805 Trifolium pratense HOM05D007071 ORTHO05D008677 1.1e-12 78.6 64 64.1
Oeu012763.1 Olea europaea HOM05D033615 ORTHO05D043133 2.0e-11 74.3 108 47.2
CiPaw.16G104200 Carya illinoinensis HOM05D007071 ORTHO05D008677 3.4e-11 73.6 66 59.1
CSS0001330 Camellia sinensis var. sinensis HOM05D007071 ORTHO05D008677 5.9e-11 72.8 65 61.5
Actinidia03957 Actinidia chinensis HOM05D002116 ORTHO05D002438 7.6e-11 72.4 41 85.4
QL02p030777 Quercus lobata HOM05D007071 ORTHO05D008677 1.0e-10 72.0 45 73.3
Os12g0623400 Oryza sativa ssp. japonica HOM05D007071 ORTHO05D008677 1.9e-09 67.8 79 48.1
SMO165G0174 Selaginella moellendorffii HOM05D007071 ORTHO05D008677 2.7e-08 63.9 115 34.8
Lsat_1_v5_gn_6_54121 Lactuca sativa HOM05D007371 ORTHO05D009319 1.8e-07 61.2 38 73.7
PGSC0003DMG400019076 Solanum tuberosum HOM05D007071 ORTHO05D008677 2.3e-07 60.8 71 46.5
Mapoly0045s0075 Marchantia polymorpha HOM05D007071 ORTHO05D008677 5.1e-07 59.7 103 31.1
Pp3c26_10880 Physcomitrium patens HOM05D007071 ORTHO05D008677 1.5e-06 58.2 104 34.6
Pp3c4_24350 Physcomitrium patens HOM05D007071 ORTHO05D008677 4.3e-06 56.6 64 42.2


User provided reference genes

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