Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01022344001 Vitis vinifera HOM05D007225 ORTHO05D009062 3.1e-54 214.9 112 100.0
QL10p043051 Quercus lobata HOM05D007225 ORTHO05D009062 7.2e-19 97.4 99 55.6
Dinv24394 Davidia involucrata HOM05D007225 ORTHO05D009062 2.1e-18 95.9 103 61.2
CiPaw.04G081200 Carya illinoinensis HOM05D007225 ORTHO05D009062 2.7e-18 95.5 99 55.6
COL.COLO4_35773 Corchorus olitorius HOM05D007225 ORTHO05D009062 3.0e-17 92.0 101 56.4
Potri.005G064951 Populus trichocarpa HOM05D007225 ORTHO05D009062 4.0e-17 91.7 104 54.8
Potri.005G064800 Populus trichocarpa HOM05D007225 ORTHO05D009062 1.2e-16 90.1 104 53.8
Prupe.4G273000 Prunus persica HOM05D007225 ORTHO05D009062 1.2e-16 90.1 100 52.0
TAR625G0602 Trochodendron aralioides HOM05D007225 ORTHO05D009062 2.0e-16 89.4 106 54.7
Sabra05G0053800 Salix brachista HOM05D007225 ORTHO05D009062 2.6e-16 89.0 107 53.3
Gohir.D10G108600 Gossypium hirsutum HOM05D007225 ORTHO05D009062 4.4e-16 88.2 105 56.2
Ciclev10002244m.g Citrus clementina HOM05D007225 ORTHO05D009062 5.7e-16 87.8 104 55.8
RcHm_v2.0_Chr4g0412751 Rosa chinensis HOM05D007225 ORTHO05D009062 4.8e-15 84.7 100 48.0
vmacro12787 Vaccinium macrocarpon HOM05D007225 ORTHO05D009062 4.8e-15 84.7 101 54.5
FvH4_4g13030 Fragaria vesca HOM05D007225 ORTHO05D009062 8.2e-15 84.0 100 48.0
FAN12G1161 Fragaria x ananassa HOM05D007225 ORTHO05D009062 8.2e-15 84.0 100 48.0
FAN07G2982 Fragaria x ananassa HOM05D007225 ORTHO05D009062 1.4e-14 83.2 100 47.0
Duzib187G1928 Durio zibethinus HOM05D007225 ORTHO05D009062 4.1e-14 81.6 103 50.5
Gorai.011G119000 Gossypium raimondii HOM05D007225 ORTHO05D009062 4.1e-14 81.6 101 53.5
Cpa.g.sc42.174 Carica papaya HOM05D007225 ORTHO05D009062 9.1e-14 80.5 106 48.1
MD17G1201700 Malus domestica HOM05D007225 ORTHO05D009062 9.1e-14 80.5 100 48.0
Atru.chr4.938 Acer truncatum HOM05D007225 ORTHO05D009062 1.6e-13 79.7 99 47.5
CSS0045766 Camellia sinensis var. sinensis HOM05D007225 ORTHO05D009062 1.6e-13 79.7 106 51.9
Hma1.2p1_0539F.1_g174530 Hydrangea macrophylla HOM05D007225 ORTHO05D009062 3.5e-13 78.6 106 53.8
Nn1g06303 Nelumbo nucifera HOM05D007225 ORTHO05D009062 1.7e-12 76.3 107 46.7
Thecc.01G134800 Theobroma cacao HOM05D007225 ORTHO05D009062 1.7e-12 76.3 104 48.1
MELO3C023228.2 Cucumis melo HOM05D007225 ORTHO05D009062 1.5e-11 73.2 99 46.5
Cc07_g18810 Coffea canephora HOM05D007225 ORTHO05D009062 4.2e-11 71.6 106 47.2
Rhsim10G0132500 Rhododendron simsii HOM05D007225 ORTHO05D009062 5.5e-11 71.2 84 53.6
TAR381G0670 Trochodendron aralioides HOM05D007225 ORTHO05D009062 1.2e-10 70.1 111 45.9
CANSAT01G2273 Cannabis sativa HOM05D007225 ORTHO05D009062 2.7e-10 68.9 102 45.1
CsaV3_2G019450 Cucumis sativus L. HOM05D007225 ORTHO05D009062 6.1e-10 67.8 99 43.4
Lalb_Chr13g0296631 Lupinus albus HOM05D007225 ORTHO05D009062 1.4e-09 66.6 100 48.0
Ca_17629_v3 Cicer arietinum L. HOM05D007225 ORTHO05D009062 1.8e-09 66.2 95 43.2
Phvul.002G273400 Phaseolus vulgaris HOM05D007225 ORTHO05D009062 2.3e-09 65.9 99 48.5
MSTRG.23466 Avicennia marina HOM05D007225 ORTHO05D009062 5.2e-09 64.7 104 45.2
TPR.G37342 Trifolium pratense HOM05D007225 ORTHO05D009062 6.8e-09 64.3 95 43.2
Sed0013127 Sechium edule HOM05D007225 ORTHO05D009062 1.2e-08 63.5 99 42.4
AUR62017902 Chenopodium quinoa HOM05D007225 ORTHO05D009062 1.5e-08 63.2 107 40.2
AUR62043562 Chenopodium quinoa HOM05D007225 ORTHO05D009062 1.5e-08 63.2 107 40.2
Eucgr.I00189 Eucalyptus grandis HOM05D007225 ORTHO05D009062 3.4e-08 62.0 100 43.0
Psat7g045080 Pisum sativum HOM05D007225 ORTHO05D009062 4.4e-08 61.6 95 41.1
Aqoxy5G02304 Aquilegia oxysepala HOM05D007225 ORTHO05D009062 5.7e-08 61.2 110 40.9
Oeu058297.1 Olea europaea HOM05D007225 ORTHO05D009062 5.7e-08 61.2 101 38.6
AUR62003589 Chenopodium quinoa HOM05D007225 ORTHO05D009062 7.5e-08 60.8 108 40.7
Glyma.05G192800 Glycine max HOM05D007225 ORTHO05D009062 7.5e-08 60.8 99 44.4
MBI06_g27455_MAGBIO Magnolia biondii HOM05D007225 ORTHO05D009062 7.5e-08 60.8 107 44.9
PSO528G0250 Papaver somniferum HOM05D007225 ORTHO05D009062 9.8e-08 60.5 109 39.4
PSO170G5625 Papaver somniferum HOM05D007225 ORTHO05D009062 8.3e-07 57.4 108 38.9
Lj4g0008022 Lotus japonicus HOM05D007225 ORTHO05D009062 1.1e-06 57.0 103 39.8
Hund04436 Selenicereus undatus HOM05D007225 ORTHO05D009062 1.1e-06 57.0 105 38.1
Solyc01g105570.4 Solanum lycopersicum HOM05D007225 ORTHO05D009062 1.1e-06 57.0 102 45.1
PGSC0003DMG400012541 Solanum tuberosum HOM05D007225 ORTHO05D009062 1.4e-06 56.6 102 41.2
ClCG02G000390 Citrullus lanatus HOM05D007225 ORTHO05D009062 2.4e-06 55.8 113 38.1
Glyma.08G000900 Glycine max HOM05D007225 ORTHO05D009062 3.1e-06 55.5 58 48.3
Migut.H00686 Erythranthe guttata HOM05D007225 ORTHO05D009062 4.1e-06 55.1 99 38.4
ECA233G3017 Erigeron canadensis HOM05D007225 ORTHO05D000131 5.4e-06 54.7 102 42.2
Peaxi162Scf00172g00068 Petunia axillaris HOM05D007225 ORTHO05D009062 9.1e-06 53.9 101 44.6


User provided reference genes

Program Settings