Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01022252001 Vitis vinifera HOM05D006367 ORTHO05D007942 6.9e-116 420.6 207 100.0
TAR625G1249 Trochodendron aralioides HOM05D006367 ORTHO05D007942 1.4e-52 210.3 175 60.0
Rhsim10G0148300 Rhododendron simsii HOM05D006367 ORTHO05D007942 7.2e-49 198.0 143 69.9
Nn5g28853 Nelumbo nucifera HOM05D006367 ORTHO05D007942 9.5e-49 197.6 188 56.9
Duzib187G0980 Durio zibethinus HOM05D006367 ORTHO05D007942 1.3e-45 187.2 183 55.7
Hma1.2p1_0696F.1_g204650 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 4.9e-45 185.3 137 67.2
Ciclev10025312m.g Citrus clementina HOM05D006367 ORTHO05D007942 6.3e-45 184.9 191 52.9
Gorai.003G048000 Gossypium raimondii HOM05D006367 ORTHO05D007942 8.3e-45 184.5 166 56.0
Prupe.6G168900 Prunus persica HOM05D006367 ORTHO05D007942 8.3e-45 184.5 197 50.3
MBI04_g33338_MAGBIO Magnolia biondii HOM05D006367 ORTHO05D007942 4.1e-44 182.2 200 51.5
Gohir.A02G136100 Gossypium hirsutum HOM05D006367 ORTHO05D007942 5.4e-44 181.8 166 55.4
RcHm_v2.0_Chr2g0117401 Rosa chinensis HOM05D006367 ORTHO05D007942 9.2e-44 181.0 154 59.7
Thecc.01G115500 Theobroma cacao HOM05D006367 ORTHO05D007942 9.2e-44 181.0 167 57.5
Aqoxy6G00434 Aquilegia oxysepala HOM05D006367 ORTHO05D007942 4.5e-43 178.7 177 54.2
COL.COLO4_10985 Corchorus olitorius HOM05D006367 ORTHO05D007942 1.3e-42 177.2 189 54.5
FAN19G1918 Fragaria x ananassa HOM05D006367 ORTHO05D007942 1.7e-42 176.8 154 59.1
RcHm_v2.0_Chr2g0117461 Rosa chinensis HOM05D006367 ORTHO05D007942 1.7e-42 176.8 154 58.4
CiPaw.04G090000 Carya illinoinensis HOM05D006367 ORTHO05D007942 2.9e-42 176.0 180 55.6
Manes.12G144300 Manihot esculenta HOM05D006367 ORTHO05D007942 3.8e-42 175.6 194 50.0
FAN26G2292 Fragaria x ananassa HOM05D006367 ORTHO05D007942 6.6e-42 174.9 154 58.4
QL06p031689 Quercus lobata HOM05D006367 ORTHO05D007942 6.6e-42 174.9 119 67.2
FAN23G0352 Fragaria x ananassa HOM05D006367 ORTHO05D007942 2.5e-41 172.9 154 59.1
Potri.005G085800 Populus trichocarpa HOM05D006367 ORTHO05D007942 7.3e-41 171.4 202 49.5
CANSAT21G2601 Cannabis sativa HOM05D006367 ORTHO05D007942 9.5e-41 171.0 151 57.6
TWI75G1400 Tripterygium wilfordii HOM05D006367 ORTHO05D007942 3.6e-40 169.1 166 54.2
Oeu028362.1 Olea europaea HOM05D006367 ORTHO05D007942 4.7e-40 168.7 127 64.6
Cfa002770 Carpinus fangiana HOM05D006367 ORTHO05D007942 6.1e-40 168.3 183 53.0
THA.LOC104807726 Tarenaya hassleriana HOM05D006367 ORTHO05D007942 1.8e-39 166.8 183 52.5
Atru.chr7.1822 Acer truncatum HOM05D006367 ORTHO05D007942 2.3e-39 166.4 160 56.9
MD10G1028700 Malus domestica HOM05D006367 ORTHO05D007942 3.0e-39 166.0 156 54.5
Eucgr.I00312 Eucalyptus grandis HOM05D006367 ORTHO05D007942 8.9e-39 164.5 178 54.5
Haze_25063 Corylus avellana HOM05D006367 ORTHO05D007942 1.2e-38 164.1 148 59.5
Migut.H02447 Erythranthe guttata HOM05D006367 ORTHO05D007942 1.5e-38 163.7 141 56.7
PGR004G1961 Punica granatum HOM05D006367 ORTHO05D007942 1.5e-38 163.7 179 51.4
Sabra05G0070700 Salix brachista HOM05D006367 ORTHO05D007942 1.5e-38 163.7 204 48.0
MSTRG.23307 Avicennia marina HOM05D006367 ORTHO05D007942 3.4e-38 162.5 144 59.0
BcaC02g08760 Brassica carinata HOM05D006367 ORTHO05D007942 3.4e-38 162.5 201 46.3
C04p50960 Brassica napus HOM05D006367 ORTHO05D007942 3.4e-38 162.5 201 46.3
PSO675G5206 Papaver somniferum HOM05D006367 ORTHO05D007942 4.4e-38 162.2 191 48.7
Cc07_g16470 Coffea canephora HOM05D006367 ORTHO05D007942 1.3e-37 160.6 140 57.1
EL10Ac7g17324 Beta vulgaris HOM05D006367 ORTHO05D007942 2.9e-37 159.5 118 61.9
Thhalv10000126m.g Eutrema salsugineum HOM05D006367 ORTHO05D007942 2.9e-37 159.5 158 53.2
Lalb_Chr07g0184731 Lupinus albus HOM05D006367 ORTHO05D007942 2.9e-37 159.5 175 50.3
PGSC0003DMG400023291 Solanum tuberosum HOM05D006367 ORTHO05D007942 2.9e-37 159.5 124 58.1
A04p16450 Brassica napus HOM05D006367 ORTHO05D007942 4.9e-37 158.7 201 45.3
BraA04t17280Z Brassica rapa HOM05D006367 ORTHO05D007942 4.9e-37 158.7 201 45.3
Sopen04g022980 Solanum pennellii HOM05D006367 ORTHO05D007942 1.1e-36 157.5 184 47.8
Solyc04g051610.3 Solanum lycopersicum HOM05D006367 ORTHO05D007942 1.4e-36 157.1 183 49.2
SGA_v2.0_scaffold2G01287 Striga asiatica HOM05D006367 ORTHO05D007942 2.4e-36 156.4 152 50.7
ClCG02G000950 Citrullus lanatus HOM05D006367 ORTHO05D007942 4.1e-36 155.6 172 50.0
Sc14g0009250 Simmondsia chinensis HOM05D006367 ORTHO05D007942 4.1e-36 155.6 183 50.8
BcaB06g27790 Brassica carinata HOM05D006367 ORTHO05D007942 5.4e-36 155.2 196 45.9
Hund02300 Selenicereus undatus HOM05D006367 ORTHO05D007942 5.4e-36 155.2 116 62.9
Sp4g00950 Schrenkiella parvula HOM05D006367 ORTHO05D007942 7.0e-36 154.8 185 48.1
Lj4g0025161 Lotus japonicus HOM05D006367 ORTHO05D007942 9.2e-36 154.5 191 44.0
Nitab4.5_0000184g0160 Nicotiana tabacum HOM05D006367 ORTHO05D007942 9.2e-36 154.5 208 42.8
HanXRQChr03g0078741 Helianthus annuus HOM05D006367 ORTHO05D007942 1.2e-35 154.1 171 49.7
CsaV3_2G017740 Cucumis sativus L. HOM05D006367 ORTHO05D007942 2.0e-35 153.3 173 51.4
SalBow6G4439 Salvia bowleyana HOM05D006367 ORTHO05D007942 2.7e-35 152.9 127 55.9
AUR62040525 Chenopodium quinoa HOM05D006367 ORTHO05D007942 4.6e-35 152.1 129 55.0
DCAR_011462 Daucus carota HOM05D006367 ORTHO05D007942 4.6e-35 152.1 148 52.0
AT2G21860 Arabidopsis thaliana HOM05D006367 ORTHO05D007942 7.8e-35 151.4 147 51.0
Carub.0004s0089 Capsella rubella HOM05D006367 ORTHO05D007942 7.8e-35 151.4 163 49.7
AUR62039784 Chenopodium quinoa HOM05D006367 ORTHO05D007942 1.0e-34 151.0 129 55.0
Cc04_g11230 Coffea canephora HOM05D006367 ORTHO05D007942 1.3e-34 150.6 141 55.3
Ah.15g092040 Amaranthus hybridus HOM05D006367 ORTHO05D007942 1.7e-34 150.2 132 54.5
Ca_17687_v3 Cicer arietinum L. HOM05D006367 ORTHO05D007942 3.0e-34 149.4 118 57.6
Nitab4.5_0009050g0050 Nicotiana tabacum HOM05D006367 ORTHO05D007942 3.0e-34 149.4 195 44.1
AL4G11170 Arabidopsis lyrata HOM05D006367 ORTHO05D007942 3.9e-34 149.1 143 49.0
MELO3C034581.2 Cucumis melo HOM05D006367 ORTHO05D007942 3.9e-34 149.1 172 49.4
ECA240G4594 Erigeron canadensis HOM05D006367 ORTHO05D007942 5.0e-34 148.7 117 59.0
CARHR112860 Cardamine hirsuta HOM05D006367 ORTHO05D007942 1.1e-33 147.5 186 44.1
Psat7g050440 Pisum sativum HOM05D006367 ORTHO05D007942 1.1e-33 147.5 182 46.2
CDE04G0187 Ceratophyllum demersum HOM05D006367 ORTHO05D007942 1.5e-33 147.1 158 48.1
Glyma.05G184900 Glycine max HOM05D006367 ORTHO05D007942 1.5e-33 147.1 150 53.3
Nitab4.5_0005102g0010 Nicotiana tabacum HOM05D006367 ORTHO05D007942 3.3e-33 146.0 220 40.0
MELO3C020965.2 Cucumis melo HOM05D006367 ORTHO05D007942 4.3e-33 145.6 172 48.8
arahy.Tifrunner.gnm1.ann1.511U58 Arachis hypogaea HOM05D006367 ORTHO05D007942 5.6e-33 145.2 118 58.5
Medtr8g092050 Medicago truncatula HOM05D006367 ORTHO05D007942 5.6e-33 145.2 149 51.0
arahy.Tifrunner.gnm1.ann1.GSD986 Arachis hypogaea HOM05D006367 ORTHO05D007942 7.3e-33 144.8 118 58.5
Glyma.08G142900 Glycine max HOM05D006367 ORTHO05D007942 1.2e-32 144.1 149 55.0
TPR.G2178 Trifolium pratense HOM05D006367 ORTHO05D007942 2.8e-32 142.9 129 52.7
Aa31LG7G14760 Aethionema arabicum HOM05D006367 ORTHO05D007942 8.0e-32 141.4 180 46.7
Os01g0716400 Oryza sativa ssp. japonica HOM05D006367 ORTHO05D007942 2.3e-31 139.8 117 59.0
Lsat_1_v5_gn_5_44981 Lactuca sativa HOM05D006367 ORTHO05D007942 8.9e-31 137.9 139 51.1
VMungo0251G2542 Vigna mungo HOM05D006367 ORTHO05D007942 1.5e-30 137.1 145 50.3
HPP92_027992 Vanilla planifolia HOM05D006367 ORTHO05D007942 3.4e-30 136.0 144 49.3
Phvul.002G265800 Phaseolus vulgaris HOM05D006367 ORTHO05D007942 5.8e-30 135.2 119 55.5
Zm00001eb361490 Zea mays HOM05D006367 ORTHO05D007942 7.5e-30 134.8 111 61.3
Dinv42673 Davidia involucrata HOM05D006367 ORTHO05D007942 1.1e-28 131.0 94 62.8
vmacro12891 Vaccinium macrocarpon HOM05D006367 ORTHO05D007942 1.9e-28 130.2 122 58.2
ATR1120G154 Amborella trichopoda HOM05D006367 ORTHO05D007942 3.2e-28 129.4 182 41.8
Hma1.2p1_0696F.1_g204660 Hydrangea macrophylla HOM05D006367 ORTHO05D007942 4.1e-28 129.0 95 64.2
CARHR112850 Cardamine hirsuta HOM05D006367 ORTHO05D007942 8.6e-26 121.3 189 41.3
Peaxi162Scf00106g01216 Petunia axillaris HOM05D006367 ORTHO05D007942 2.8e-24 116.3 195 37.9
CDE06G2209 Ceratophyllum demersum HOM05D006367 ORTHO05D007942 4.7e-24 115.5 90 56.7
CSS0012231 Camellia sinensis var. sinensis HOM05D006367 ORTHO05D007942 9.9e-22 107.8 78 64.1
FvH4_1g22940 Fragaria vesca HOM05D006367 ORTHO05D007942 9.9e-22 107.8 78 67.9
unitig_899.g14612 Utricularia gibba HOM05D006367 ORTHO05D007942 9.9e-22 107.8 93 54.8
CAN.G1044.2 Capsicum annuum HOM05D006367 ORTHO05D007942 1.7e-21 107.1 117 46.2
RcHm_v2.0_Chr2g0117441 Rosa chinensis HOM05D006367 ORTHO05D007942 2.9e-21 106.3 78 65.4
Actinidia05379 Actinidia chinensis HOM05D006367 ORTHO05D007942 4.1e-20 102.4 78 60.3
BolC4t26688H Brassica oleracea HOM05D002293 ORTHO05D005475 2.3e-18 96.7 127 47.2
PGSC0003DMG400020963 Solanum tuberosum HOM05D006367 ORTHO05D007942 2.5e-17 93.2 78 55.1
Gohir.D03G046900 Gossypium hirsutum HOM05D006367 ORTHO05D007942 5.2e-15 85.5 59 62.7
Lj4P863T60 Lonicera japonica HOM05D006367 ORTHO05D007942 5.2e-15 85.5 77 55.8
SMO367G0721 Selaginella moellendorffii HOM05D006367 ORTHO05D007942 6.8e-15 85.1 106 36.8
PGSC0003DMG400004546 Solanum tuberosum HOM05D006367 ORTHO05D007942 2.9e-13 79.7 70 52.9
Sed0027379 Sechium edule HOM05D006367 ORTHO05D007942 1.4e-12 77.4 78 48.7
AagrBONN_evm.TU.Sc2ySwM_344.2769 Anthoceros agrestis HOM05D006367 ORTHO05D007942 1.9e-12 77.0 127 36.2
Eucgr.L02754 Eucalyptus grandis HOM05D006367 ORTHO05D007942 4.2e-12 75.9 118 39.8
CARHR034070 Cardamine hirsuta HOM05D006367 ORTHO05D007942 3.5e-11 72.8 134 35.1
Pp3c8_810 Physcomitrium patens HOM05D006367 ORTHO05D007942 1.7e-10 70.5 106 34.9
CBR_g8843 Chara braunii HOM05D006367 ORTHO05D007942 1.2e-08 64.3 153 30.1
AagrBONN_evm.TU.Sc2ySwM_344.1355 Anthoceros agrestis HOM05D006367 ORTHO05D007942 9.0e-07 58.2 111 33.3
RcHm_v2.0_Chr2g0117431 Rosa chinensis HOM05D006367 ORTHO05D007942 1.5e-06 57.4 67 46.3


User provided reference genes

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