Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 4.8e-172 607.8 300 100.0
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 1.7e-116 423.3 301 71.8
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 1.4e-110 403.7 303 71.0
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 9.8e-109 397.5 300 69.3
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 1.7e-108 396.7 300 68.3
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 3.7e-108 395.6 300 70.3
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 3.7e-108 395.6 301 68.4
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 1.4e-107 393.7 301 69.8
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 1.9e-107 393.3 301 69.4
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 2.1e-106 389.8 301 68.1
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 2.3e-105 386.3 351 60.7
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 3.9e-105 385.6 301 67.4
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 5.1e-105 385.2 315 65.7
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 6.6e-105 384.8 303 68.6
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 5.6e-104 381.7 303 66.3
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 1.2e-103 380.6 305 66.6
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 2.3e-102 376.3 306 69.3
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 3.1e-102 375.9 303 66.3
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 1.5e-101 373.6 300 66.7
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 4.4e-101 372.1 297 67.3
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 1.3e-100 370.5 299 64.5
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 1.1e-99 367.5 300 65.0
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 2.4e-99 366.3 300 63.7
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 3.2e-99 365.9 300 65.3
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 3.2e-99 365.9 302 62.9
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 4.1e-99 365.5 309 66.0
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 1.6e-98 363.6 300 63.3
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 2.1e-98 363.2 303 63.7
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 7.8e-98 361.3 301 63.1
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 1.3e-97 360.5 301 65.1
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 1.7e-97 360.1 300 63.0
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 1.7e-97 360.1 307 63.2
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 3.9e-97 359.0 329 60.8
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 6.6e-97 358.2 301 62.8
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 6.6e-97 358.2 301 62.8
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 1.5e-96 357.1 306 60.8
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 2.5e-96 356.3 313 62.3
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 1.2e-95 354.0 300 61.7
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 6.2e-95 351.7 300 60.7
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 1.1e-94 350.9 306 64.1
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 1.8e-94 350.1 303 60.1
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 2.4e-94 349.7 301 61.5
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 2.4e-94 349.7 300 61.3
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 2.4e-94 349.7 300 61.3
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 3.1e-94 349.4 300 61.3
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 3.1e-94 349.4 307 63.5
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 2.0e-93 346.7 304 59.9
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 2.0e-93 346.7 304 60.2
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 2.6e-93 346.3 307 59.9
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 4.4e-93 345.5 306 59.8
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 5.8e-93 345.1 291 62.9
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 5.8e-93 345.1 348 57.2
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 9.9e-93 344.4 305 59.3
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 3.8e-92 342.4 306 59.8
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 4.9e-92 342.0 300 61.0
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 4.9e-92 342.0 302 60.6
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 6.4e-92 341.7 272 65.4
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 8.4e-92 341.3 304 59.5
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 4.2e-91 339.0 307 58.0
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 5.4e-91 338.6 301 61.1
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 7.1e-91 338.2 300 60.7
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 1.2e-90 337.4 302 61.3
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 1.6e-90 337.0 309 58.6
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 2.1e-90 336.7 307 59.9
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 3.5e-90 335.9 305 60.0
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 7.8e-90 334.7 297 62.6
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 1.7e-89 333.6 304 60.5
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 2.3e-89 333.2 309 58.9
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 5.1e-89 332.0 263 64.3
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 5.6e-88 328.6 300 61.0
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 5.6e-88 328.6 301 59.8
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 9.6e-88 327.8 303 59.4
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.6e-87 327.0 299 57.9
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 1.6e-87 327.0 305 59.3
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 6.2e-87 325.1 303 58.4
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 3.1e-86 322.8 303 57.1
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 1.6e-82 310.5 273 60.4
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 6.0e-82 308.5 189 81.0
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 2.3e-81 306.6 248 62.9
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 3.1e-78 296.2 188 78.2
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 5.3e-78 295.4 187 78.6
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 2.0e-77 293.5 284 56.7
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 5.8e-77 292.0 186 76.9
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 7.6e-77 291.6 348 50.6
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 2.9e-76 289.7 222 66.2
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 6.4e-76 288.5 228 64.9
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 7.1e-75 285.0 179 79.9
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 3.5e-74 282.7 226 64.6
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 3.5e-74 282.7 301 54.2
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 1.8e-73 280.4 185 75.1
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 1.6e-71 273.9 227 63.4
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 3.8e-68 262.7 273 52.7
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 8.4e-68 261.5 304 48.4
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 2.5e-67 260.0 294 50.7
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 1.6e-63 247.3 195 64.1
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 2.8e-63 246.5 306 46.7
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 9.0e-62 241.5 143 79.7
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 1.5e-61 240.7 316 48.1
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 6.5e-60 235.3 293 44.0
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 9.3e-59 231.5 247 49.0
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 1.0e-52 211.5 205 47.3
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 5.7e-48 195.7 253 43.5
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 7.4e-48 195.3 251 42.6
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 2.8e-47 193.4 132 78.0
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 5.3e-46 189.1 203 46.8
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 2.0e-45 187.2 182 58.8
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 3.3e-40 169.9 228 47.4
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 2.5e-35 153.7 209 35.9
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 5.3e-30 136.0 210 41.0
Eucgr.L02916 Eucalyptus grandis HOM05D006522 ORTHO05D008183 6.5e-28 129.0 103 67.0
SEGI_11019 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 1.7e-23 114.4 56 91.1
SHI11627 Sapria himalayana HOM05D006522 ORTHO05D008183 6.5e-20 102.4 97 55.7
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 2.5e-19 100.5 90 55.6
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 3.6e-18 96.7 59 71.2
Aqoxy6G00538 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 6.1e-18 95.9 100 57.0
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 1.4e-17 94.7 61 72.1
COL.COLO4_11047 Corchorus olitorius HOM05D006522 ORTHO05D008183 6.8e-17 92.4 97 55.7
Potri.007G087000 Populus trichocarpa HOM05D006522 ORTHO05D008183 2.0e-16 90.9 74 64.9
AagrBONN_evm.TU.Sc2ySwM_368.3361 Anthoceros agrestis HOM05D006522 ORTHO05D008183 3.1e-14 83.6 91 48.4
CDE10G0344 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 1.3e-12 78.2 78 57.7
DCAR_011494 Daucus carota HOM05D006522 ORTHO05D008183 6.8e-09 65.9 60 61.7


User provided reference genes

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