Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01022161001 Vitis vinifera HOM05D003605 ORTHO05D004292 6.3e-126 454.1 232 100.0
GSVIVG01022163001 Vitis vinifera HOM05D003605 ORTHO05D004292 6.2e-57 224.9 206 63.1
MELO3C017998.2 Cucumis melo HOM05D003605 ORTHO05D004292 1.7e-54 216.9 206 60.7
Ciclev10025279m.g Citrus clementina HOM05D003605 ORTHO05D004292 1.1e-53 214.2 206 59.2
Atru.chr1.3714 Acer truncatum HOM05D003605 ORTHO05D004292 1.4e-53 213.8 206 59.2
Hma1.2p1_0011F.1_g007160 Hydrangea macrophylla HOM05D003605 ORTHO05D004292 1.4e-53 213.8 206 58.7
Thecc.01G106100 Theobroma cacao HOM05D003605 ORTHO05D004292 1.4e-53 213.8 206 59.2
Duzib264G0977 Durio zibethinus HOM05D003605 ORTHO05D004292 1.9e-53 213.4 206 59.2
ClCG07G009440 Citrullus lanatus HOM05D003605 ORTHO05D004292 2.4e-53 213.0 206 59.7
PGR004G1268 Punica granatum HOM05D003605 ORTHO05D004292 3.2e-53 212.6 206 58.7
CsaV3_4G000360 Cucumis sativus L. HOM05D003605 ORTHO05D004292 4.2e-53 212.2 206 59.2
Duzib147G1273 Durio zibethinus HOM05D003605 ORTHO05D004292 4.2e-53 212.2 206 59.7
Gorai.007G241800 Gossypium raimondii HOM05D003605 ORTHO05D004292 4.2e-53 212.2 206 58.7
QL02p032424 Quercus lobata HOM05D003605 ORTHO05D004292 5.4e-53 211.8 206 59.2
CiPaw.03G138800 Carya illinoinensis HOM05D003605 ORTHO05D004292 7.1e-53 211.5 206 58.7
Gohir.D13G027000 Gossypium hirsutum HOM05D003605 ORTHO05D004292 7.1e-53 211.5 206 58.7
Gohir.A11G199633 Gossypium hirsutum HOM05D003605 ORTHO05D004292 1.2e-52 210.7 206 58.3
Nn5g29013 Nelumbo nucifera HOM05D003605 ORTHO05D004292 1.6e-52 210.3 206 58.7
TWI77G0071 Tripterygium wilfordii HOM05D003605 ORTHO05D004292 1.6e-52 210.3 206 58.3
QL06p050316 Quercus lobata HOM05D003605 ORTHO05D004292 2.1e-52 209.9 206 58.3
DCAR_032171 Daucus carota HOM05D003605 ORTHO05D004292 3.5e-52 209.1 206 56.8
Prupe.6G179700 Prunus persica HOM05D003605 ORTHO05D004292 4.6e-52 208.8 206 58.7
Lalb_Chr07g0185001 Lupinus albus HOM05D003605 ORTHO05D004292 6.0e-52 208.4 206 57.3
Sabra05G0065200 Salix brachista HOM05D006521 ORTHO05D004292 6.0e-52 208.4 206 58.3
Solyc04g054710.3 Solanum lycopersicum HOM05D003605 ORTHO05D004292 6.0e-52 208.4 206 56.8
Nitab4.5_0000214g0060 Nicotiana tabacum HOM05D003605 ORTHO05D004292 7.8e-52 208.0 206 56.8
Sed0022642 Sechium edule HOM05D003605 ORTHO05D004292 7.8e-52 208.0 206 58.3
Cc07_g15560 Coffea canephora HOM05D003605 ORTHO05D004292 1.0e-51 207.6 206 58.7
MD15G1329000 Malus domestica HOM05D003605 ORTHO05D004292 1.0e-51 207.6 206 56.8
Manes.12G138300 Manihot esculenta HOM05D003605 ORTHO05D004292 1.0e-51 207.6 206 56.3
Sopen04g024460 Solanum pennellii HOM05D003605 ORTHO05D004292 1.0e-51 207.6 206 56.3
TAR376G0746 Trochodendron aralioides HOM05D003605 ORTHO05D004292 1.0e-51 207.6 206 58.3
Gohir.D11G224500 Gossypium hirsutum HOM05D003605 ORTHO05D004292 1.3e-51 207.2 206 57.8
Gohir.A13G028300 Gossypium hirsutum HOM05D003605 ORTHO05D004292 1.7e-51 206.8 206 57.3
arahy.Tifrunner.gnm1.ann1.RRG4JE Arachis hypogaea HOM05D003605 ORTHO05D004292 2.3e-51 206.5 206 57.3
SGA_v2.0_scaffold34G13608 Striga asiatica HOM05D003605 ORTHO05D004292 2.3e-51 206.5 206 58.3
CiPaw.04G096600 Carya illinoinensis HOM05D003605 ORTHO05D004292 3.0e-51 206.1 206 58.3
COL.COLO4_09912 Corchorus olitorius HOM05D003605 ORTHO05D004292 3.0e-51 206.1 206 57.3
FvH4_1g21500 Fragaria vesca HOM05D003605 ORTHO05D004292 3.0e-51 206.1 206 58.3
FAN19G1223 Fragaria x ananassa HOM05D003605 ORTHO05D004292 3.0e-51 206.1 206 58.3
Oeu053564.1 Olea europaea HOM05D003605 ORTHO05D004292 3.0e-51 206.1 206 57.3
MD01G1024400 Malus domestica HOM05D003605 ORTHO05D004292 3.9e-51 205.7 206 56.8
Nitab4.5_0004386g0030 Nicotiana tabacum HOM05D003605 ORTHO05D004292 3.9e-51 205.7 206 55.8
arahy.Tifrunner.gnm1.ann1.8A1TPW Arachis hypogaea HOM05D003605 ORTHO05D004292 5.1e-51 205.3 206 56.8
Medtr8g091280 Medicago truncatula HOM05D003605 ORTHO05D004292 5.1e-51 205.3 206 57.3
Peaxi162Scf00183g01421 Petunia axillaris HOM05D003605 ORTHO05D004292 5.1e-51 205.3 206 56.3
TAR628G1078 Trochodendron aralioides HOM05D003605 ORTHO05D004292 5.1e-51 205.3 206 57.3
Rhsim04G0097000 Rhododendron simsii HOM05D003605 ORTHO05D004292 6.6e-51 204.9 206 56.8
RhsimUnG0212800 Rhododendron simsii HOM05D003605 ORTHO05D004292 6.6e-51 204.9 206 56.8
TWI53G0811 Tripterygium wilfordii HOM05D003605 ORTHO05D004292 6.6e-51 204.9 206 56.3
Ah.04g164730 Amaranthus hybridus HOM05D003605 ORTHO05D004292 8.7e-51 204.5 206 56.8
Lj4g0017562 Lotus japonicus HOM05D003605 ORTHO05D004292 8.7e-51 204.5 206 57.3
MSTRG.23329 Avicennia marina HOM05D003605 ORTHO05D004292 1.1e-50 204.1 206 56.8
CDE03G0458 Ceratophyllum demersum HOM05D003605 ORTHO05D004292 1.1e-50 204.1 206 56.8
FAN26G2714 Fragaria x ananassa HOM05D003605 ORTHO05D004292 1.5e-50 203.8 206 58.3
Sed0024954 Sechium edule HOM05D003605 ORTHO05D004292 1.5e-50 203.8 205 57.1
PGSC0003DMG400027919 Solanum tuberosum HOM05D003605 ORTHO05D004292 1.9e-50 203.4 206 55.3
Migut.H02387 Erythranthe guttata HOM05D003605 ORTHO05D004292 2.5e-50 203.0 206 55.8
Lj6g0022585 Lotus japonicus HOM05D003605 ORTHO05D004292 2.5e-50 203.0 206 55.3
CAN.G878.8 Capsicum annuum HOM05D003605 ORTHO05D004292 4.3e-50 202.2 206 55.3
Sabra07G0072900 Salix brachista HOM05D003605 ORTHO05D004292 4.3e-50 202.2 206 55.8
Rhsim08G0008800 Rhododendron simsii HOM05D003605 ORTHO05D004292 5.6e-50 201.8 206 55.8
Hund02342 Selenicereus undatus HOM05D003605 ORTHO05D004292 7.3e-50 201.4 206 56.8
Phvul.002G262100 Phaseolus vulgaris HOM05D003605 ORTHO05D004292 9.6e-50 201.1 206 56.3
VMungo0251G1785 Vigna mungo HOM05D003605 ORTHO05D004292 9.6e-50 201.1 206 56.3
Potri.007G088426 Populus trichocarpa HOM05D003605 ORTHO05D004292 1.3e-49 200.7 206 55.3
RcHm_v2.0_Chr2g0115381 Rosa chinensis HOM05D003605 ORTHO05D004292 1.3e-49 200.7 206 56.8
TPR.G2157 Trifolium pratense HOM05D003605 ORTHO05D004292 1.6e-49 200.3 206 54.9
Glyma.08G138800 Glycine max HOM05D003605 ORTHO05D004292 2.1e-49 199.9 206 56.3
Sc04g0003290 Simmondsia chinensis HOM05D003605 ORTHO05D004292 2.1e-49 199.9 206 56.8
HPP92_016106 Vanilla planifolia HOM05D003605 ORTHO05D004292 2.1e-49 199.9 206 56.3
AUR62033748 Chenopodium quinoa HOM05D003605 ORTHO05D004292 2.8e-49 199.5 206 56.3
Phvul.001G250600 Phaseolus vulgaris HOM05D003605 ORTHO05D004292 2.8e-49 199.5 206 54.4
Gorai.013G030300 Gossypium raimondii HOM05D003605 ORTHO05D004292 3.6e-49 199.1 202 56.4
Rhsim08G0008700 Rhododendron simsii HOM05D003605 ORTHO05D004292 3.6e-49 199.1 206 55.3
GSVIVG01008982001 Vitis vinifera HOM05D003605 ORTHO05D004292 3.6e-49 199.1 206 56.3
CANSAT01G2754 Cannabis sativa HOM05D003605 ORTHO05D004292 4.8e-49 198.7 206 54.9
AUR62029939 Chenopodium quinoa HOM05D003605 ORTHO05D004292 4.8e-49 198.7 206 56.3
ECA232G1065 Erigeron canadensis HOM05D003605 ORTHO05D004292 4.8e-49 198.7 206 54.9
Glyma.11G238300 Glycine max HOM05D003605 ORTHO05D004292 4.8e-49 198.7 206 55.3
Psat7g053000 Pisum sativum HOM05D003605 ORTHO05D004292 4.8e-49 198.7 206 55.3
Potri.005G079200 Populus trichocarpa HOM05D003605 ORTHO05D004292 4.8e-49 198.7 206 55.3
HanXRQChr09g0260211 Helianthus annuus HOM05D003605 ORTHO05D004292 6.2e-49 198.4 206 55.8
Lsat_1_v5_gn_4_141440 Lactuca sativa HOM05D003605 ORTHO05D004292 6.2e-49 198.4 206 55.3
VMungo1383G3703 Vigna mungo HOM05D003605 ORTHO05D004292 6.2e-49 198.4 206 54.4
Eucgr.I00395 Eucalyptus grandis HOM05D003605 ORTHO05D004292 1.4e-48 197.2 206 54.9
EL10Ac5g11501 Beta vulgaris HOM05D003605 ORTHO05D004292 1.8e-48 196.8 206 55.3
Hma1.2p1_0614F.1_g189540 Hydrangea macrophylla HOM05D003605 ORTHO05D004292 1.8e-48 196.8 199 56.3
Glyma.11G238200 Glycine max HOM05D003605 ORTHO05D004292 3.1e-48 196.1 207 53.6
Migut.L00103 Erythranthe guttata HOM05D003605 ORTHO05D004292 9.0e-48 194.5 206 53.9
Os01g0871300 Oryza sativa ssp. japonica HOM05D003605 ORTHO05D004292 9.0e-48 194.5 206 54.4
CSS0014678 Camellia sinensis var. sinensis HOM05D003605 ORTHO05D004292 1.2e-47 194.1 199 56.8
ECA232G4497 Erigeron canadensis HOM05D003605 ORTHO05D004292 1.2e-47 194.1 206 53.9
HanXRQChr15g0484161 Helianthus annuus HOM05D003605 ORTHO05D004292 1.2e-47 194.1 206 53.9
RhsimUnG0163700 Rhododendron simsii HOM05D003605 ORTHO05D004292 2.0e-47 193.4 211 55.0
PSO210G3598 Papaver somniferum HOM05D003605 ORTHO05D004292 2.6e-47 193.0 206 54.4
QL93p0171_0010 Quercus lobata HOM05D003605 ORTHO05D004292 2.6e-47 193.0 206 56.3
Zm00001eb348660 Zea mays HOM05D003605 ORTHO05D004292 2.6e-47 193.0 206 53.9
Medtr7g106830 Medicago truncatula HOM05D003605 ORTHO05D004292 3.4e-47 192.6 206 54.4
PSO447G0276 Papaver somniferum HOM05D003605 ORTHO05D004292 4.5e-47 192.2 206 54.4
ATR0564G471 Amborella trichopoda HOM05D003605 ORTHO05D004292 7.6e-47 191.4 206 53.4
SEGI_31864 Sequoiadendron giganteum HOM05D003605 ORTHO05D004292 9.9e-47 191.0 206 53.9
vmacro18616 Vaccinium macrocarpon HOM05D003605 ORTHO05D004292 9.9e-47 191.0 201 55.2
THA.LOC104824869 Tarenaya hassleriana HOM05D003605 ORTHO05D004292 1.3e-46 190.7 206 53.4
Glyma.05G181000 Glycine max HOM05D003605 ORTHO05D004292 2.2e-46 189.9 206 53.4
arahy.Tifrunner.gnm1.ann1.28TKL1 Arachis hypogaea HOM05D003605 ORTHO05D004292 2.9e-46 189.5 206 52.4
Lsat_1_v5_gn_4_141381 Lactuca sativa HOM05D003605 ORTHO05D004292 8.4e-46 188.0 206 53.9
CANSAT01G1177 Cannabis sativa HOM05D003605 ORTHO05D004292 1.4e-45 187.2 206 52.9
EL10Ac4g09572 Beta vulgaris HOM05D003605 ORTHO05D004292 2.4e-45 186.4 206 52.4
SHI11587 Sapria himalayana HOM05D003605 ORTHO05D004292 2.4e-45 186.4 206 52.9
VMungo1383G1191 Vigna mungo HOM05D003605 ORTHO05D004292 2.4e-45 186.4 206 51.5
Duzib187G1314 Durio zibethinus HOM05D003605 ORTHO05D004292 4.2e-45 185.7 114 82.5
AL4G11730 Arabidopsis lyrata HOM05D003605 ORTHO05D004292 1.6e-44 183.7 206 52.4
BcaC07g41087 Brassica carinata HOM05D003605 ORTHO05D004292 1.6e-44 183.7 206 52.9
CARHR113480 Cardamine hirsuta HOM05D003605 ORTHO05D004292 2.7e-44 183.0 206 51.5
Carub.0004s0139 Capsella rubella HOM05D003605 ORTHO05D004292 3.5e-44 182.6 206 51.9
BcaC02g08723 Brassica carinata HOM05D003605 ORTHO05D004292 4.6e-44 182.2 206 51.9
BcaC02g08676 Brassica carinata HOM05D003605 ORTHO05D004292 6.0e-44 181.8 206 51.9
arahy.Tifrunner.gnm1.ann1.0BA9QN Arachis hypogaea HOM05D003605 ORTHO05D004292 7.9e-44 181.4 223 49.8
AT2G22250 Arabidopsis thaliana HOM05D003605 ORTHO05D004292 1.0e-43 181.0 206 51.5
Thhalv10000093m.g Eutrema salsugineum HOM05D003605 ORTHO05D004292 1.3e-43 180.6 206 51.9
Phvul.001G250500 Phaseolus vulgaris HOM05D003605 ORTHO05D004292 1.3e-43 180.6 206 50.5
A04p16770 Brassica napus HOM05D003605 ORTHO05D004292 1.8e-43 180.3 206 51.5
BcaB08g35052 Brassica carinata HOM05D003605 ORTHO05D004292 2.3e-43 179.9 206 51.9
CARHR231470 Cardamine hirsuta HOM05D003605 ORTHO05D004292 3.0e-43 179.5 206 50.5
Aa31LG7G14510 Aethionema arabicum HOM05D003605 ORTHO05D004292 3.9e-43 179.1 206 50.5
BraA04t17309Z Brassica rapa HOM05D003605 ORTHO05D004292 5.1e-43 178.7 206 51.0
Sp4g01300 Schrenkiella parvula HOM05D003605 ORTHO05D004292 5.1e-43 178.7 206 50.5
FAN23G1157 Fragaria x ananassa HOM05D003605 ORTHO05D004292 1.5e-42 177.2 102 88.2
arahy.Tifrunner.gnm1.ann1.K33YLS Arachis hypogaea HOM05D003605 ORTHO05D004292 2.5e-42 176.4 217 48.4
SMO351G0219 Selaginella moellendorffii HOM05D003605 ORTHO05D004292 3.3e-42 176.0 206 48.5
SGA_v2.0_scaffold47G17751 Striga asiatica HOM05D003605 ORTHO05D004292 4.3e-42 175.6 196 52.0
Eucgr.I00398 Eucalyptus grandis HOM05D003605 ORTHO05D004292 2.0e-39 166.8 193 50.8
Pp3c1_16910 Physcomitrium patens HOM05D003605 ORTHO05D004292 4.5e-39 165.6 206 46.6
AUR62000485 Chenopodium quinoa HOM05D003605 ORTHO05D004292 6.4e-38 161.8 206 48.5
Aqoxy5G00902 Aquilegia oxysepala HOM05D003605 ORTHO05D004292 3.2e-37 159.5 105 77.1
arahy.Tifrunner.gnm1.ann1.T2CRY6 Arachis hypogaea HOM05D003605 ORTHO05D004292 1.6e-36 157.1 102 77.5
Mapoly0058s0104 Marchantia polymorpha HOM05D003605 ORTHO05D004292 7.9e-36 154.8 206 43.7
CBR_g81019 Chara braunii HOM05D003605 ORTHO05D004292 2.3e-35 153.3 206 43.2
AUR62006827 Chenopodium quinoa HOM05D003605 ORTHO05D004292 3.9e-35 152.5 193 48.7
Oeu034199.1 Olea europaea HOM05D003605 ORTHO05D004292 1.1e-34 151.0 85 87.1
Oeu040712.1 Olea europaea HOM05D003605 ORTHO05D004292 2.0e-31 140.2 78 85.9
Lalb_Chr13g0296061 Lupinus albus HOM05D003605 ORTHO05D004292 1.1e-29 134.4 74 86.5
MCO16G531 Micromonas commoda HOM05D003605 ORTHO05D004292 4.2e-29 132.5 208 41.3
Cre02.g147302 Chlamydomonas reinhardtii HOM05D003605 ORTHO05D004292 1.6e-28 130.6 208 38.9
vmacro09115 Vaccinium macrocarpon HOM05D003605 ORTHO05D004292 6.0e-28 128.6 102 69.6
Zm00001eb146400 Zea mays HOM05D003605 ORTHO05D004292 3.7e-25 119.4 160 47.5
arahy.Tifrunner.gnm1.ann1.W4YZP5 Arachis hypogaea HOM05D003605 ORTHO05D004292 1.0e-19 101.3 59 79.7
PRCOL_00005023 Prasinoderma coloniale HOM05D003605 ORTHO05D004292 2.3e-19 100.1 108 52.8
Eucgr.I00463 Eucalyptus grandis HOM05D003605 ORTHO05D004292 8.8e-19 98.2 206 33.0
AagrBONN_evm.TU.Sc2ySwM_344.2348 Anthoceros agrestis HOM05D003605 ORTHO05D004292 2.9e-14 83.2 147 40.1
HanXRQChr09g0260231 Helianthus annuus HOM05D003605 ORTHO05D004292 4.7e-12 75.9 46 73.9
Haze_27183 Corylus avellana HOM05D003605 ORTHO05D004292 1.1e-10 71.2 206 29.1
arahy.Tifrunner.gnm1.ann1.SX68AT Arachis hypogaea HOM05D003605 ORTHO05D004292 2.0e-10 70.5 39 82.1
MCO02G005 Micromonas commoda HOM05D003605 ORTHO05D004292 1.2e-07 61.2 204 27.9
Oeu032173.1 Olea europaea HOM05D003605 ORTHO05D004292 1.5e-07 60.8 44 59.1
Atru.chr4.227 Acer truncatum HOM05D003605 ORTHO05D004292 4.5e-07 59.3 28 89.3
Medtr1807s0010 Medicago truncatula HOM05D003605 ORTHO05D004292 4.5e-07 59.3 209 25.4
Cpa.g.sc20.227 Carica papaya HOM05D003605 ORTHO05D004292 5.9e-07 58.9 28 89.3
CSS0003079 Camellia sinensis var. sinensis HOM05D003605 ORTHO05D004292 7.7e-07 58.5 28 89.3
FAN23G2759 Fragaria x ananassa HOM05D003605 ORTHO05D004292 1.0e-06 58.2 28 85.7
Sabra18G0053200 Salix brachista HOM05D003605 ORTHO05D004078 1.7e-06 57.4 55 49.1
Sabra18G0053400 Salix brachista HOM05D003605 ORTHO05D004078 1.7e-06 57.4 55 49.1
Sabra18G0053700 Salix brachista HOM05D003605 ORTHO05D004078 5.0e-06 55.8 28 85.7
GSVIVG01020940001 Vitis vinifera HOM05D003605 ORTHO05D004292 5.0e-06 55.8 28 89.3
GSVIVG01015252001 Vitis vinifera HOM05D003605 ORTHO05D004292 8.5e-06 55.1 28 82.1


User provided reference genes

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