Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01021966001 Vitis vinifera HOM05D001419 ORTHO05D001376 1.1e-17 92.4 53 100.0
Dinv27608 Davidia involucrata HOM05D001419 ORTHO05D001376 1.1e-14 82.4 51 88.2
Rhsim07G0176600 Rhododendron simsii HOM05D001419 ORTHO05D001376 1.1e-14 82.4 51 88.2
vmacro05063 Vaccinium macrocarpon HOM05D001419 ORTHO05D001376 1.1e-14 82.4 51 88.2
CSS0002764 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 1.5e-14 82.0 51 88.2
MD12G1231500 Malus domestica HOM05D001419 ORTHO05D001376 2.5e-14 81.3 52 84.6
FvH4_5g09200 Fragaria vesca HOM05D001419 ORTHO05D001376 5.6e-14 80.1 51 84.3
FAN04G1873 Fragaria x ananassa HOM05D001419 ORTHO05D001376 5.6e-14 80.1 51 84.3
FAN13G1977 Fragaria x ananassa HOM05D001419 ORTHO05D001376 5.6e-14 80.1 51 84.3
FAN18G1957 Fragaria x ananassa HOM05D001419 ORTHO05D001376 5.6e-14 80.1 51 84.3
Thhalv10020103m.g Eutrema salsugineum HOM05D001419 ORTHO05D001376 1.3e-13 79.0 52 80.8
Sed0016461 Sechium edule HOM05D001419 ORTHO05D001376 1.3e-13 79.0 51 86.3
Aa31LG5G15430 Aethionema arabicum HOM05D001419 ORTHO05D001376 1.6e-13 78.6 51 82.4
FAN08G1260 Fragaria x ananassa HOM05D001419 ORTHO05D001376 2.1e-13 78.2 51 82.4
Sp3g03830 Schrenkiella parvula HOM05D001419 ORTHO05D001376 2.1e-13 78.2 52 78.8
Oeu001298.2 Olea europaea HOM05D001419 ORTHO05D001376 2.8e-13 77.8 50 82.0
Ciclev10003514m.g Citrus clementina HOM05D001419 ORTHO05D001376 3.7e-13 77.4 52 82.7
SalBow8G0433 Salvia bowleyana HOM05D001419 ORTHO05D001376 8.1e-13 76.3 51 82.4
SalBow8G5217 Salvia bowleyana HOM05D001419 ORTHO05D001376 8.1e-13 76.3 51 82.4
Carub.0003s0424 Capsella rubella HOM05D001419 ORTHO05D001376 2.4e-12 74.7 51 76.5
RcHm_v2.0_Chr7g0188961 Rosa chinensis HOM05D001419 ORTHO05D001376 2.4e-12 74.7 51 80.4
CSS0007272 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 3.1e-12 74.3 50 82.0
CSS0032280 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 3.1e-12 74.3 50 82.0
LjContig00470g0006858 Lotus japonicus HOM05D001419 ORTHO05D001376 6.9e-12 73.2 51 78.4
Hund02495 Selenicereus undatus HOM05D001419 ORTHO05D001376 9.0e-12 72.8 51 80.4
Lj6A836G34 Lonicera japonica HOM05D001419 ORTHO05D001376 1.2e-11 72.4 51 74.5
HPP92_011335 Vanilla planifolia HOM05D001419 ORTHO05D001376 1.5e-11 72.0 51 74.5
Oeu058428.1 Olea europaea HOM05D001419 ORTHO05D001376 2.0e-11 71.6 51 74.5
Ah.15g092890 Amaranthus hybridus HOM05D001419 ORTHO05D001376 2.6e-11 71.2 52 75.0
Ciclev10031078m.g Citrus clementina HOM05D001419 ORTHO05D001376 3.4e-11 70.9 51 80.4
BcaC05g29982 Brassica carinata HOM05D001419 ORTHO05D001376 4.5e-11 70.5 52 75.0
Haze_07114 Corylus avellana HOM05D001419 ORTHO05D001376 4.5e-11 70.5 51 74.5
Lj5A89G33 Lonicera japonica HOM05D001419 ORTHO05D001376 4.5e-11 70.5 50 82.0
RcHm_v2.0_Chr3g0452891 Rosa chinensis HOM05D001419 ORTHO05D001376 4.5e-11 70.5 84 57.1
Sabra12G0077800 Salix brachista HOM05D001419 ORTHO05D001376 4.5e-11 70.5 51 78.4
Lj9A675T37 Lonicera japonica HOM05D001419 ORTHO05D001376 7.6e-11 69.7 86 55.8
CSS0026667 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 9.9e-11 69.3 51 70.6
Actinidia30595 Actinidia chinensis HOM05D001419 ORTHO05D001376 1.3e-10 68.9 50 78.0
Gohir.D11G247500 Gossypium hirsutum HOM05D001419 ORTHO05D001376 1.7e-10 68.6 51 76.5
Gorai.007G263800 Gossypium raimondii HOM05D001419 ORTHO05D001376 1.7e-10 68.6 51 76.5
Phvul.006G096800 Phaseolus vulgaris HOM05D001419 ORTHO05D001376 1.7e-10 68.6 50 72.0
Cpa.g.sc117.12 Carica papaya HOM05D001419 ORTHO05D001376 2.9e-10 67.8 44 81.8
CARHR079320 Cardamine hirsuta HOM05D001419 ORTHO05D001376 3.8e-10 67.4 46 76.1
Cfa018722 Carpinus fangiana HOM05D001419 ORTHO05D001376 4.9e-10 67.0 51 72.5
MD06G1132600 Malus domestica HOM05D001419 ORTHO05D001376 4.9e-10 67.0 51 70.6
BraA06t26388Z Brassica rapa HOM05D001419 ORTHO05D001376 6.4e-10 66.6 51 72.5
CSS0009563 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 8.4e-10 66.2 51 70.6
DCAR_031210 Daucus carota HOM05D001419 ORTHO05D001376 8.4e-10 66.2 51 66.7
Peaxi162Scf00410g00019 Petunia axillaris HOM05D001419 ORTHO05D001376 8.4e-10 66.2 49 73.5
CAN.G843.26 Capsicum annuum HOM05D001419 ORTHO05D001376 1.1e-09 65.9 51 72.5
MD16G1129000 Malus domestica HOM05D001419 ORTHO05D001376 1.1e-09 65.9 51 66.7
A06p34600 Brassica napus HOM05D001419 ORTHO05D001376 1.4e-09 65.5 51 70.6
Thhalv10024690m.g Eutrema salsugineum HOM05D001419 ORTHO05D001376 1.4e-09 65.5 51 68.6
ClCG03G004000 Citrullus lanatus HOM05D001419 ORTHO05D001376 1.9e-09 65.1 68 61.8
QL10p000923 Quercus lobata HOM05D001419 ORTHO05D001376 1.9e-09 65.1 51 72.5
MD13G1129100 Malus domestica HOM05D001419 ORTHO05D001376 2.4e-09 64.7 51 64.7
Hund07015 Selenicereus undatus HOM05D001419 ORTHO05D001376 2.4e-09 64.7 50 76.0
AUR62009515 Chenopodium quinoa HOM05D001419 ORTHO05D001376 3.2e-09 64.3 51 66.7
Ca_09389_v3 Cicer arietinum L. HOM05D001419 ORTHO05D001376 4.2e-09 63.9 44 75.0
Migut.K01042 Erythranthe guttata HOM05D001419 ORTHO05D001376 4.2e-09 63.9 45 77.8
Peaxi162Scf00314g00524 Petunia axillaris HOM05D001419 ORTHO05D001376 4.2e-09 63.9 51 70.6
CARHR189850 Cardamine hirsuta HOM05D001419 ORTHO05D001376 5.5e-09 63.5 51 72.5
Nitab4.5_0000060g0030 Nicotiana tabacum HOM05D001419 ORTHO05D001376 5.5e-09 63.5 51 72.5
Prupe.1G217300 Prunus persica HOM05D001419 ORTHO05D001376 7.1e-09 63.2 51 64.7
vmacro01028 Vaccinium macrocarpon HOM05D001419 ORTHO05D001376 7.1e-09 63.2 68 57.4
FvH4_6g04230 Fragaria vesca HOM05D001419 ORTHO05D001376 1.2e-08 62.4 48 70.8
FAN05G2203 Fragaria x ananassa HOM05D001419 ORTHO05D001376 1.2e-08 62.4 48 70.8
FAN09G0147 Fragaria x ananassa HOM05D001419 ORTHO05D001376 1.2e-08 62.4 48 70.8
FAN14G0260 Fragaria x ananassa HOM05D001419 ORTHO05D001376 1.2e-08 62.4 48 70.8
Nitab4.5_0002116g0060 Nicotiana tabacum HOM05D001419 ORTHO05D001376 1.6e-08 62.0 51 70.6
Solyc03g118390.3 Solanum lycopersicum HOM05D001419 ORTHO05D001376 1.6e-08 62.0 51 66.7
Sopen03g037290 Solanum pennellii HOM05D001419 ORTHO05D001376 1.6e-08 62.0 51 66.7
AUR62034773 Chenopodium quinoa HOM05D001419 ORTHO05D001376 2.1e-08 61.6 51 62.7
Peaxi162Scf00128g01744 Petunia axillaris HOM05D001419 ORTHO05D001376 3.5e-08 60.8 48 75.0
THA.LOC104808047 Tarenaya hassleriana HOM05D001419 ORTHO05D001376 3.5e-08 60.8 51 62.7
TWI36G1167 Tripterygium wilfordii HOM05D001419 ORTHO05D001376 3.5e-08 60.8 46 73.9
AagrBONN_evm.TU.Sc2ySwM_344.2716 Anthoceros agrestis HOM05D001419 ORTHO05D001376 4.6e-08 60.5 49 67.3
CARHR232460 Cardamine hirsuta HOM05D001419 ORTHO05D001376 7.9e-08 59.7 51 62.7
arahy.Tifrunner.gnm1.ann1.JIRJ73 Arachis hypogaea HOM05D001419 ORTHO05D001376 1.0e-07 59.3 53 67.9
BraA01t01587Z Brassica rapa HOM05D001419 ORTHO05D001376 1.0e-07 59.3 51 60.8
AUR62028853 Chenopodium quinoa HOM05D001419 ORTHO05D001376 1.0e-07 59.3 51 60.8
CSS0017420 Camellia sinensis var. sinensis HOM05D001419 ORTHO05D001376 1.3e-07 58.9 40 75.0
AUR62005702 Chenopodium quinoa HOM05D001419 ORTHO05D001376 1.3e-07 58.9 51 60.8
AT4G25070 Arabidopsis thaliana HOM05D001419 ORTHO05D001376 1.8e-07 58.5 51 58.8
Carub.0007s1597 Capsella rubella HOM05D001419 ORTHO05D001376 1.8e-07 58.5 51 60.8
BcaNung03996 Brassica carinata HOM05D001419 ORTHO05D001376 2.3e-07 58.2 51 58.8
A01p16320 Brassica napus HOM05D001419 ORTHO05D001376 2.3e-07 58.2 51 58.8
Ah.03g135620 Amaranthus hybridus HOM05D001419 ORTHO05D001376 3.9e-07 57.4 56 58.9
Os11g0520500 Oryza sativa ssp. japonica HOM05D001419 ORTHO05D001376 3.9e-07 57.4 51 58.8
Cc02_g32270 Coffea canephora HOM05D001419 ORTHO05D001376 5.1e-07 57.0 49 65.3
AL7G28080 Arabidopsis lyrata HOM05D001419 ORTHO05D001376 6.7e-07 56.6 51 54.9
C01p20470 Brassica napus HOM05D001419 ORTHO05D001376 8.7e-07 56.2 51 56.9
FAN07G2814 Fragaria x ananassa HOM05D001419 ORTHO05D001376 8.7e-07 56.2 54 66.7
FAN12G3369 Fragaria x ananassa HOM05D001419 ORTHO05D001376 8.7e-07 56.2 54 66.7
FAN17G3068 Fragaria x ananassa HOM05D001419 ORTHO05D001376 8.7e-07 56.2 54 66.7
Rhsim08G0195700 Rhododendron simsii HOM05D001419 ORTHO05D001376 1.1e-06 55.8 66 59.1
Actinidia30906 Actinidia chinensis HOM05D001419 ORTHO05D001376 1.5e-06 55.5 43 79.1
Eucgr.H04424 Eucalyptus grandis HOM05D001419 ORTHO05D001376 1.5e-06 55.5 52 61.5
BolC1t01978H Brassica oleracea HOM05D001419 ORTHO05D001376 1.9e-06 55.1 51 54.9
CBR_g27777 Chara braunii HOM05D001419 ORTHO05D001303 2.5e-06 54.7 51 51.0
HanXRQChr12g0379631 Helianthus annuus HOM05D001419 ORTHO05D001376 2.5e-06 54.7 35 85.7
Ah.02g114670 Amaranthus hybridus HOM05D001419 ORTHO05D001376 4.3e-06 53.9 67 50.7
Zm00001eb170360 Zea mays HOM05D001419 ORTHO05D001376 5.6e-06 53.5 51 54.9
MSTRG.11234 Avicennia marina HOM05D001419 ORTHO05D001376 7.4e-06 53.1 44 68.2
BcaC09g50813 Brassica carinata HOM05D001419 ORTHO05D001376 7.4e-06 53.1 50 56.0
MD00G1051700 Malus domestica HOM05D001419 ORTHO05D001376 7.4e-06 53.1 52 59.6
Haze_04287 Corylus avellana HOM05D001419 ORTHO05D001376 9.6e-06 52.8 36 83.3


User provided reference genes

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