Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01021911001 Vitis vinifera HOM05D008278 ORTHO05D009926 2.5e-17 91.7 70 100.0
Dinv04275 Davidia involucrata HOM05D008278 ORTHO05D009926 1.8e-12 75.5 42 73.8
Thecc.05G292500 Theobroma cacao HOM05D008278 ORTHO05D009926 1.0e-10 69.7 58 58.6
CSS0040059 Camellia sinensis var. sinensis HOM05D008278 ORTHO05D009926 5.0e-10 67.4 63 61.9
Phvul.006G097300 Phaseolus vulgaris HOM05D008278 ORTHO05D009926 5.0e-10 67.4 29 89.7
COL.COLO4_13623 Corchorus olitorius HOM05D008278 ORTHO05D009926 1.9e-09 65.5 57 56.1
RcHm_v2.0_Chr3g0452671 Rosa chinensis HOM05D010912 ORTHO05D009926 1.9e-09 65.5 30 83.3
FAN14G0650 Fragaria x ananassa HOM05D010912 ORTHO05D009926 3.2e-09 64.7 29 86.2
Manes.09G159200 Manihot esculenta HOM05D008278 ORTHO05D009926 4.2e-09 64.3 58 56.9
Gohir.A11G257600 Gossypium hirsutum HOM05D010912 ORTHO05D009926 5.5e-09 63.9 29 79.3
Gohir.D11G267600 Gossypium hirsutum HOM05D010912 ORTHO05D009926 5.5e-09 63.9 29 79.3
Gorai.007G287300 Gossypium raimondii HOM05D010912 ORTHO05D009926 5.5e-09 63.9 29 79.3
FAN05G5515 Fragaria x ananassa HOM05D010912 ORTHO05D009926 1.6e-08 62.4 28 85.7
MD04G1216200 Malus domestica HOM05D010912 ORTHO05D009926 2.1e-08 62.0 28 82.1
Medtr7g108080 Medicago truncatula HOM05D008278 ORTHO05D009926 2.1e-08 62.0 41 65.9
Gohir.A11G257700 Gossypium hirsutum HOM05D010912 ORTHO05D009926 2.7e-08 61.6 58 55.2
TWI09G1464 Tripterygium wilfordii HOM05D008278 ORTHO05D009926 3.6e-08 61.2 40 60.0
Duzib151G0456 Durio zibethinus HOM05D008278 ORTHO05D009926 4.7e-08 60.8 41 63.4
MD04G1216300 Malus domestica HOM05D010912 ORTHO05D009926 6.1e-08 60.5 36 86.1
Carub.0004s3061 Capsella rubella HOM05D008278 ORTHO05D009926 1.0e-07 59.7 40 62.5
Haze_04293 Corylus avellana HOM05D010912 ORTHO05D009926 1.8e-07 58.9 29 79.3
Eucgr.H04419 Eucalyptus grandis HOM05D010912 ORTHO05D009926 1.8e-07 58.9 26 80.8
Thecc.04G277500 Theobroma cacao HOM05D008278 ORTHO05D009926 1.8e-07 58.9 41 61.0
Hma1.2p1_0209F.1_g089030 Hydrangea macrophylla HOM05D008278 ORTHO05D009926 2.3e-07 58.5 44 63.6
Actinidia21077 Actinidia chinensis HOM05D008278 ORTHO05D009926 3.0e-07 58.2 34 73.5
CiPaw.07G010500 Carya illinoinensis HOM05D010912 ORTHO05D009926 3.0e-07 58.2 28 78.6
FvH4_6g04120 Fragaria vesca HOM05D010912 ORTHO05D009926 3.0e-07 58.2 74 59.5
FAN02G3698 Fragaria x ananassa HOM05D010912 ORTHO05D009926 3.0e-07 58.2 26 84.6
FAN05G5084 Fragaria x ananassa HOM05D010912 ORTHO05D009926 3.0e-07 58.2 26 84.6
Thhalv10001693m.g Eutrema salsugineum HOM05D008278 ORTHO05D009926 4.0e-07 57.8 30 76.7
CiPaw.08G100100 Carya illinoinensis HOM05D008278 ORTHO05D009926 5.2e-07 57.4 77 61.0
vmacro08204 Vaccinium macrocarpon HOM05D008278 ORTHO05D009926 5.2e-07 57.4 30 73.3
Dinv32998 Davidia involucrata HOM05D000003 ORTHO05D000126 6.7e-07 57.0 27 81.5
PGR119G0374 Punica granatum HOM05D008278 ORTHO05D009926 8.8e-07 56.6 30 70.0
QL03p001140 Quercus lobata HOM05D010912 ORTHO05D009926 8.8e-07 56.6 29 75.9
Lj1g0017232 Lotus japonicus HOM05D008278 ORTHO05D009926 1.2e-06 56.2 61 50.8
CiPaw.02G086800 Carya illinoinensis HOM05D008278 ORTHO05D009926 1.5e-06 55.8 30 70.0
COL.COLO4_08021 Corchorus olitorius HOM05D008278 ORTHO05D009926 1.5e-06 55.8 34 70.6
Sc16g0008190 Simmondsia chinensis HOM05D010912 ORTHO05D009926 1.5e-06 55.8 25 80.0
PSO170G0879 Papaver somniferum HOM05D008278 ORTHO05D009926 2.0e-06 55.5 26 80.8
QL06p007372 Quercus lobata HOM05D008278 ORTHO05D009926 2.0e-06 55.5 28 75.0
Actinidia24853 Actinidia chinensis HOM05D008278 ORTHO05D009926 2.6e-06 55.1 42 59.5
Duzib138G1619 Durio zibethinus HOM05D008278 ORTHO05D009926 2.6e-06 55.1 41 61.0
Cc01_g20290 Coffea canephora HOM05D008278 ORTHO05D009926 3.3e-06 54.7 34 67.6
Thecc.01G291200 Theobroma cacao HOM05D008278 ORTHO05D009926 3.3e-06 54.7 30 73.3
CiPaw.07G100700 Carya illinoinensis HOM05D008278 ORTHO05D009926 4.4e-06 54.3 30 73.3
Manes.01G214200 Manihot esculenta HOM05D008278 ORTHO05D009926 7.5e-06 53.5 40 67.5
COL.COLO4_13930 Corchorus olitorius HOM05D008278 ORTHO05D009926 9.7e-06 53.1 28 67.9
QL12p024203 Quercus lobata HOM05D008278 ORTHO05D009926 9.7e-06 53.1 30 70.0
Sc24g0003970 Simmondsia chinensis HOM05D008278 ORTHO05D009926 9.7e-06 53.1 45 55.6


User provided reference genes

Program Settings