Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01021702001 Vitis vinifera HOM05D000300 ORTHO05D008505 1.1e-38 162.9 85 100.0
GSVIVG01021454001 Vitis vinifera HOM05D000300 ORTHO05D008505 4.9e-36 154.1 85 94.1
Dinv04313 Davidia involucrata HOM05D000300 ORTHO05D008505 4.8e-23 110.9 78 80.8
GSVIVG01014363001 Vitis vinifera HOM05D000300 ORTHO05D000383 1.1e-22 109.8 78 82.1
Haze_09412 Corylus avellana HOM05D000300 ORTHO05D008505 5.3e-22 107.5 78 78.2
TWI38G1039 Tripterygium wilfordii HOM05D000300 ORTHO05D008505 5.3e-22 107.5 82 74.4
Manes.03G111900 Manihot esculenta HOM05D000300 ORTHO05D008505 6.9e-22 107.1 78 76.9
Peaxi162Scf00000g00412 Petunia axillaris HOM05D000300 ORTHO05D008505 6.9e-22 107.1 67 85.1
Nn1g06576 Nelumbo nucifera HOM05D000300 ORTHO05D008505 1.2e-21 106.3 80 76.2
Cc05_g12170 Coffea canephora HOM05D000300 ORTHO05D000383 1.5e-21 105.9 78 76.9
Lj3g0005060 Lotus japonicus HOM05D000300 ORTHO05D008505 2.0e-21 105.5 78 75.6
Oeu060546.1 Olea europaea HOM05D000300 ORTHO05D008505 2.6e-21 105.1 78 76.9
Atru.chr2.2664 Acer truncatum HOM05D000300 ORTHO05D008505 3.4e-21 104.8 78 75.6
CiPaw.11G167900 Carya illinoinensis HOM05D000300 ORTHO05D008505 4.5e-21 104.4 78 75.6
QL08p020830 Quercus lobata HOM05D000300 ORTHO05D008505 1.0e-20 103.2 66 81.8
MSTRG.6839 Avicennia marina HOM05D000300 ORTHO05D008505 1.3e-20 102.8 78 76.9
arahy.Tifrunner.gnm1.ann1.UT5NS3 Arachis hypogaea HOM05D000300 ORTHO05D008505 1.7e-20 102.4 78 74.4
arahy.Tifrunner.gnm1.ann1.Z7GNQ3 Arachis hypogaea HOM05D000300 ORTHO05D008505 1.7e-20 102.4 78 74.4
Duzib213G0972 Durio zibethinus HOM05D000300 ORTHO05D008505 1.7e-20 102.4 78 75.6
Potri.011G121000 Populus trichocarpa HOM05D000300 ORTHO05D008505 1.7e-20 102.4 78 75.6
ClCG10G006870 Citrullus lanatus HOM05D000300 ORTHO05D008505 2.2e-20 102.1 67 82.1
MELO3C016520.2 Cucumis melo HOM05D000300 ORTHO05D008505 2.2e-20 102.1 67 82.1
SGA_v2.0_scaffold34G13828 Striga asiatica HOM05D000300 ORTHO05D008505 2.2e-20 102.1 78 73.1
Ciclev10007647m.g Citrus clementina HOM05D000300 ORTHO05D000383 2.9e-20 101.7 78 74.4
CsaV3_3G006220 Cucumis sativus L. HOM05D000300 ORTHO05D008505 2.9e-20 101.7 67 82.1
Solyc12g013790.3 Solanum lycopersicum HOM05D000300 ORTHO05D008505 2.9e-20 101.7 65 81.5
Sopen12g007100 Solanum pennellii HOM05D000300 ORTHO05D008505 2.9e-20 101.7 65 81.5
Glyma.13G278100 Glycine max HOM05D000300 ORTHO05D008505 3.8e-20 101.3 78 73.1
Phvul.005G071500 Phaseolus vulgaris HOM05D000300 ORTHO05D008505 3.8e-20 101.3 78 73.1
PGSC0003DMG400015358 Solanum tuberosum HOM05D000300 ORTHO05D008505 3.8e-20 101.3 67 80.6
VMungo1080G0699 Vigna mungo HOM05D000300 ORTHO05D008505 3.8e-20 101.3 78 73.1
Hma1.2p1_1618F.1_g293900 Hydrangea macrophylla HOM05D000300 ORTHO05D008505 4.9e-20 100.9 67 80.6
HPP92_025994 Vanilla planifolia HOM05D000300 ORTHO05D008505 6.5e-20 100.5 78 73.1
Aqoxy1G02483 Aquilegia oxysepala HOM05D000300 ORTHO05D008505 1.1e-19 99.8 67 82.1
CSS0002162 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D008505 1.1e-19 99.8 78 73.1
Glyma.12G223300 Glycine max HOM05D000300 ORTHO05D008505 1.1e-19 99.8 78 71.8
Sabra11G0105000 Salix brachista HOM05D000300 ORTHO05D008505 1.4e-19 99.4 78 74.4
unitig_747.g21571 Utricularia gibba HOM05D000300 ORTHO05D008505 1.4e-19 99.4 80 73.8
COL.COLO4_09413 Corchorus olitorius HOM05D000300 ORTHO05D008505 1.9e-19 99.0 78 73.1
Lalb_Chr20g0109791 Lupinus albus HOM05D000300 ORTHO05D008505 1.9e-19 99.0 78 71.8
Prupe.4G183600 Prunus persica HOM05D000300 ORTHO05D008505 1.9e-19 99.0 78 70.5
Thecc.07G080900 Theobroma cacao HOM05D000300 ORTHO05D008505 1.9e-19 99.0 78 73.1
FvH4_3g20100 Fragaria vesca HOM05D000300 ORTHO05D008505 2.5e-19 98.6 74 73.0
FAN11G2262 Fragaria x ananassa HOM05D000300 ORTHO05D008505 2.5e-19 98.6 74 73.0
FAN16G2347 Fragaria x ananassa HOM05D000300 ORTHO05D008505 2.5e-19 98.6 74 73.0
FAN21G2789 Fragaria x ananassa HOM05D000300 ORTHO05D008505 2.5e-19 98.6 74 73.0
Ca_01834_v3 Cicer arietinum L. HOM05D000300 ORTHO05D008505 4.2e-19 97.8 78 71.8
PSO541G3772 Papaver somniferum HOM05D000300 ORTHO05D008505 4.2e-19 97.8 78 71.8
TPR.G38968 Trifolium pratense HOM05D000300 ORTHO05D008505 4.2e-19 97.8 78 71.8
PSO675G9140 Papaver somniferum HOM05D000300 ORTHO05D008505 5.5e-19 97.4 78 71.8
RcHm_v2.0_Chr5g0033901 Rosa chinensis HOM05D000300 ORTHO05D008505 5.5e-19 97.4 74 71.6
MD03G1225800 Malus domestica HOM05D000300 ORTHO05D008505 9.3e-19 96.7 67 76.1
MD11G1245300 Malus domestica HOM05D000300 ORTHO05D008505 9.3e-19 96.7 67 76.1
arahy.Tifrunner.gnm1.ann1.MM4FDC Arachis hypogaea HOM05D000300 ORTHO05D008505 1.2e-18 96.3 66 75.8
Psat3g101080 Pisum sativum HOM05D000300 ORTHO05D008505 1.2e-18 96.3 78 70.5
CANSAT56G2812 Cannabis sativa HOM05D000300 ORTHO05D008505 1.6e-18 95.9 78 70.5
Os04g0530300 Oryza sativa ssp. japonica HOM05D000300 ORTHO05D008505 1.6e-18 95.9 77 68.8
ATR0680G062 Amborella trichopoda HOM05D000300 ORTHO05D008505 3.5e-18 94.7 80 68.8
Medtr2g079460 Medicago truncatula HOM05D000300 ORTHO05D008505 4.6e-18 94.4 78 69.2
Rhsim06G0197200 Rhododendron simsii HOM05D000300 ORTHO05D008505 4.6e-18 94.4 78 69.2
TAR626G1261 Trochodendron aralioides HOM05D000300 ORTHO05D008505 6.0e-18 94.0 65 80.0
vmacro11851 Vaccinium macrocarpon HOM05D000300 ORTHO05D008505 7.9e-18 93.6 78 67.9
Gohir.A04G028900 Gossypium hirsutum HOM05D000300 ORTHO05D008505 1.0e-17 93.2 78 67.9
Gohir.D05G358300 Gossypium hirsutum HOM05D000300 ORTHO05D008505 1.0e-17 93.2 78 67.9
Gorai.009G390800 Gossypium raimondii HOM05D000300 ORTHO05D008505 1.0e-17 93.2 78 67.9
Nitab4.5_0000662g0230 Nicotiana tabacum HOM05D000300 ORTHO05D008505 1.0e-17 93.2 74 70.3
MD11G1245600 Malus domestica HOM05D000300 ORTHO05D008505 6.7e-17 90.5 67 76.1
CDE02G0965 Ceratophyllum demersum HOM05D000300 ORTHO05D008505 1.5e-16 89.4 78 66.7
Migut.M00819 Erythranthe guttata HOM05D000300 ORTHO05D008505 2.5e-16 88.6 75 69.3
Mapoly0026s0140 Marchantia polymorpha HOM05D000300 ORTHO05D008505 4.3e-16 87.8 76 64.5
Sed0021435 Sechium edule HOM05D000300 ORTHO05D008505 4.3e-16 87.8 53 84.9
Hma1.2p1_1738F.1_g299980 Hydrangea macrophylla HOM05D000300 ORTHO05D008505 5.7e-16 87.4 53 84.9
Hund02219 Selenicereus undatus HOM05D000300 ORTHO05D008505 7.4e-16 87.0 67 67.2
DCAR_013093 Daucus carota HOM05D000300 ORTHO05D008505 1.3e-15 86.3 67 73.1
Nitab4.5_0007374g0020 Nicotiana tabacum HOM05D000300 ORTHO05D008505 1.3e-15 86.3 100 55.0
Thhalv10013922m.g Eutrema salsugineum HOM05D000300 ORTHO05D008505 2.2e-15 85.5 85 57.6
SalBow7G1295 Salvia bowleyana HOM05D000300 ORTHO05D008505 2.2e-15 85.5 76 67.1
SalBow7G3546 Salvia bowleyana HOM05D000300 ORTHO05D008505 2.2e-15 85.5 76 67.1
PGR031G2267 Punica granatum HOM05D000300 ORTHO05D008505 2.8e-15 85.1 78 65.4
SMO367G0821 Selaginella moellendorffii HOM05D000300 ORTHO05D008505 3.7e-15 84.7 80 61.2
BcaC04g20418 Brassica carinata HOM05D000300 ORTHO05D008505 6.3e-15 84.0 85 56.5
A10p11170 Brassica napus HOM05D000300 ORTHO05D008505 6.3e-15 84.0 85 56.5
C09p43740 Brassica napus HOM05D000300 ORTHO05D008505 6.3e-15 84.0 85 56.5
BolC9t57259H Brassica oleracea HOM05D000300 ORTHO05D008505 6.3e-15 84.0 85 56.5
BraA10t43209Z Brassica rapa HOM05D000300 ORTHO05D008505 6.3e-15 84.0 85 56.5
THA.LOC104813391 Tarenaya hassleriana HOM05D000300 ORTHO05D008505 8.2e-15 83.6 67 65.7
AL8G28840 Arabidopsis lyrata HOM05D000300 ORTHO05D008505 1.8e-14 82.4 78 61.5
AT5G53800 Arabidopsis thaliana HOM05D000300 ORTHO05D008505 1.8e-14 82.4 78 61.5
Carub.0008s1409 Capsella rubella HOM05D000300 ORTHO05D008505 4.1e-14 81.3 78 60.3
BcaB08g35739 Brassica carinata HOM05D000300 ORTHO05D008505 5.3e-14 80.9 78 59.0
Sp6g15870 Schrenkiella parvula HOM05D000300 ORTHO05D008505 1.2e-13 79.7 78 59.0
Ah.04g164930 Amaranthus hybridus HOM05D000300 ORTHO05D008505 2.0e-13 79.0 76 57.9
AUR62029376 Chenopodium quinoa HOM05D000300 ORTHO05D008505 2.0e-13 79.0 78 56.4
AUR62034261 Chenopodium quinoa HOM05D000300 ORTHO05D008505 4.5e-13 77.8 78 55.1
Cpa.g.sc80.49 Carica papaya HOM05D000300 ORTHO05D008505 7.7e-13 77.0 71 63.4
arahy.Tifrunner.gnm1.ann1.5AH57W Arachis hypogaea HOM05D000300 ORTHO05D008505 2.9e-12 75.1 51 80.4
ECA240G3136 Erigeron canadensis HOM05D000300 ORTHO05D008505 3.8e-12 74.7 64 65.6
SEGI_35024 Sequoiadendron giganteum HOM05D000300 ORTHO05D008505 6.5e-12 73.9 63 61.9
AagrBONN_evm.TU.Sc2ySwM_340.171 Anthoceros agrestis HOM05D000300 ORTHO05D008505 1.9e-11 72.4 65 61.5
Lsat_1_v5_gn_9_97040 Lactuca sativa HOM05D000300 ORTHO05D008505 1.9e-11 72.4 64 65.6
arahy.Tifrunner.gnm1.ann1.F96EFF Arachis hypogaea HOM05D003444 ORTHO05D008505 5.5e-11 70.9 62 64.5
Aa31LG3G10120 Aethionema arabicum HOM05D000300 ORTHO05D008505 7.2e-11 70.5 113 43.4
Zm00001eb075780 Zea mays HOM05D000300 ORTHO05D008505 7.2e-11 70.5 62 64.5
arahy.Tifrunner.gnm1.ann1.MF7AUF Arachis hypogaea HOM05D003391 ORTHO05D008505 3.6e-10 68.2 40 85.0
Pp3c25_13690 Physcomitrium patens HOM05D000300 ORTHO05D008505 3.6e-10 68.2 78 50.0
arahy.Tifrunner.gnm1.ann1.1E0HE3 Arachis hypogaea HOM05D001903 ORTHO05D013215 4.3e-08 61.2 39 79.5
arahy.Tifrunner.gnm1.ann1.ZC4B2S Arachis hypogaea HOM05D001903 ORTHO05D001847 3.7e-07 58.2 50 72.0
Sc16g0006940 Simmondsia chinensis HOM05D000300 ORTHO05D008505 5.3e-06 54.3 104 39.4


User provided reference genes

Program Settings