Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01021656001 Vitis vinifera HOM05D000149 ORTHO05D000076 4.3e-36 154.1 74 100.0
GSVIVG01009754001 Vitis vinifera HOM05D000149 ORTHO05D000076 5.1e-21 104.0 66 78.8
GSVIVG01009752001 Vitis vinifera HOM05D000149 ORTHO05D000076 1.5e-20 102.4 66 77.3
Prupe.1G375700 Prunus persica HOM05D000149 ORTHO05D000076 7.1e-15 83.6 66 63.6
TAR628G0889 Trochodendron aralioides HOM05D000149 ORTHO05D000076 2.1e-14 82.0 69 60.9
Haze_22536 Corylus avellana HOM05D000149 ORTHO05D000076 1.5e-12 75.9 65 60.0
Cfa013862 Carpinus fangiana HOM05D000149 ORTHO05D000076 1.9e-12 75.5 66 59.1
MD08G1027000 Malus domestica HOM05D000149 ORTHO05D000076 2.5e-12 75.1 67 56.7
MD15G1023600 Malus domestica HOM05D000149 ORTHO05D000076 4.3e-12 74.3 66 57.6
MD15G1023700 Malus domestica HOM05D000149 ORTHO05D000076 4.3e-12 74.3 66 57.6
Thecc.08G031700 Theobroma cacao HOM05D000149 ORTHO05D000076 1.3e-11 72.8 68 58.8
Dinv39446 Davidia involucrata HOM05D000149 ORTHO05D000076 2.1e-11 72.0 70 57.1
QL02p009349 Quercus lobata HOM05D000149 ORTHO05D000076 2.8e-11 71.6 67 58.2
QL07p047069 Quercus lobata HOM05D000149 ORTHO05D000076 2.8e-11 71.6 67 58.2
FAN27G0631 Fragaria x ananassa HOM05D000149 ORTHO05D005356 4.8e-11 70.9 70 52.9
Gohir.D06G003900 Gossypium hirsutum HOM05D000149 ORTHO05D000076 4.8e-11 70.9 68 58.8
Lj4A36G46 Lonicera japonica HOM05D000149 ORTHO05D000076 4.8e-11 70.9 71 53.5
Gohir.A06G008200 Gossypium hirsutum HOM05D000149 ORTHO05D000076 6.2e-11 70.5 68 58.8
Gorai.010G008500 Gossypium raimondii HOM05D000149 ORTHO05D000076 6.2e-11 70.5 68 58.8
Atru.chr13.429 Acer truncatum HOM05D000149 ORTHO05D000076 8.1e-11 70.1 67 58.2
Potri.005G230100 Populus trichocarpa HOM05D000149 ORTHO05D000076 8.1e-11 70.1 63 60.3
Atru.chr13.427 Acer truncatum HOM05D000149 ORTHO05D000076 1.1e-10 69.7 66 59.1
QL02p009257 Quercus lobata HOM05D000149 ORTHO05D000076 1.1e-10 69.7 67 56.7
RcHm_v2.0_Chr6g0301521 Rosa chinensis HOM05D000149 ORTHO05D000076 1.1e-10 69.7 74 54.1
FAN20G0790 Fragaria x ananassa HOM05D000149 ORTHO05D000076 1.4e-10 69.3 70 52.9
Duzib041G0193 Durio zibethinus HOM05D000149 ORTHO05D000076 2.4e-10 68.6 68 55.9
CSS0039813 Camellia sinensis var. sinensis HOM05D000149 ORTHO05D000076 3.1e-10 68.2 73 52.1
COL.COLO4_26259 Corchorus olitorius HOM05D000149 ORTHO05D000076 3.1e-10 68.2 68 55.9
FvH4_2g39450 Fragaria vesca HOM05D000149 ORTHO05D000076 3.1e-10 68.2 69 55.1
Lalb_Chr14g0369431 Lupinus albus HOM05D000149 ORTHO05D000076 3.1e-10 68.2 65 55.4
RcHm_v2.0_Chr6g0301501 Rosa chinensis HOM05D000149 ORTHO05D000076 3.1e-10 68.2 68 55.9
Thecc.08G031500 Theobroma cacao HOM05D000149 ORTHO05D000076 3.1e-10 68.2 68 54.4
Sabra05G0177800 Salix brachista HOM05D000149 ORTHO05D000076 4.0e-10 67.8 66 56.1
TWI56G0894 Tripterygium wilfordii HOM05D000149 ORTHO05D000076 4.0e-10 67.8 70 50.0
Glyma.14G072300 Glycine max HOM05D000149 ORTHO05D000076 5.3e-10 67.4 65 55.4
Glyma.17G252700 Glycine max HOM05D000149 ORTHO05D000076 5.3e-10 67.4 65 52.3
arahy.Tifrunner.gnm1.ann1.1RH1JA Arachis hypogaea HOM05D000149 ORTHO05D000076 6.9e-10 67.0 65 55.4
arahy.Tifrunner.gnm1.ann1.ICA228 Arachis hypogaea HOM05D000149 ORTHO05D000076 6.9e-10 67.0 65 55.4
Cfa013861 Carpinus fangiana HOM05D000149 ORTHO05D000076 2.0e-09 65.5 66 57.6
TPR.G14393 Trifolium pratense HOM05D000149 ORTHO05D000076 2.0e-09 65.5 66 53.0
Cpa.g.sc99.38 Carica papaya HOM05D000149 ORTHO05D000076 5.8e-09 63.9 66 48.5
MBI10_g06726_MAGBIO Magnolia biondii HOM05D000149 ORTHO05D000076 5.8e-09 63.9 69 50.7
THA.LOC104809232 Tarenaya hassleriana HOM05D000149 ORTHO05D000076 5.8e-09 63.9 67 52.2
Nn5g29679 Nelumbo nucifera HOM05D000149 ORTHO05D000076 7.6e-09 63.5 68 47.1
Nn5g29680 Nelumbo nucifera HOM05D000149 ORTHO05D000076 7.6e-09 63.5 67 49.3
MSTRG.1263 Avicennia marina HOM05D000149 ORTHO05D000076 1.3e-08 62.8 66 51.5
CiPaw.07G158600 Carya illinoinensis HOM05D000149 ORTHO05D000076 1.3e-08 62.8 66 53.0
Gohir.D05G195250 Gossypium hirsutum HOM05D000149 ORTHO05D000076 1.7e-08 62.4 68 51.5
Migut.C00261 Erythranthe guttata HOM05D000149 ORTHO05D000076 2.9e-08 61.6 73 46.6
Migut.C00754 Erythranthe guttata HOM05D000149 ORTHO05D000076 2.9e-08 61.6 73 46.6
Gohir.A05G192000 Gossypium hirsutum HOM05D000149 ORTHO05D000076 2.9e-08 61.6 68 51.5
Oeu007378.1 Olea europaea HOM05D000149 ORTHO05D000076 2.9e-08 61.6 66 45.5
GSVIVG01009751001 Vitis vinifera HOM05D000149 ORTHO05D000076 3.8e-08 61.2 70 50.0
Gorai.009G200100 Gossypium raimondii HOM05D000149 ORTHO05D000076 4.9e-08 60.8 68 51.5
Phvul.001G012300 Phaseolus vulgaris HOM05D000149 ORTHO05D000076 4.9e-08 60.8 67 49.3
vmacro21673 Vaccinium macrocarpon HOM05D000149 ORTHO05D000076 4.9e-08 60.8 66 53.0
PGSC0003DMG400003743 Solanum tuberosum HOM05D000149 ORTHO05D000076 6.5e-08 60.5 66 48.5
FvH4_4g32530 Fragaria vesca HOM05D000149 ORTHO05D000076 8.4e-08 60.1 74 45.9
Manes.05G156400 Manihot esculenta HOM05D000149 ORTHO05D000076 8.4e-08 60.1 66 50.0
FAN12G0481 Fragaria x ananassa HOM05D000149 ORTHO05D000076 1.9e-07 58.9 74 45.9
MBI16_g26157_MAGBIO Magnolia biondii HOM05D000149 ORTHO05D000076 1.9e-07 58.9 66 45.5
Medtr1g022455 Medicago truncatula HOM05D000149 ORTHO05D000076 1.9e-07 58.9 65 49.2
SGA_v2.0_scaffold328G48823 Striga asiatica HOM05D000149 ORTHO05D000076 1.9e-07 58.9 71 49.3
CAN.G1226.50 Capsicum annuum HOM05D000149 ORTHO05D000076 2.5e-07 58.5 67 46.3
CAN.G1226.51 Capsicum annuum HOM05D000149 ORTHO05D000076 2.5e-07 58.5 69 44.9
Cpa.g.sc99.37 Carica papaya HOM05D000149 ORTHO05D000076 2.5e-07 58.5 66 42.4
RcHm_v2.0_Chr4g0441411 Rosa chinensis HOM05D000149 ORTHO05D000076 2.5e-07 58.5 72 43.1
Medtr1g022465 Medicago truncatula HOM05D000149 ORTHO05D000076 3.2e-07 58.2 65 50.8
ClCG05G018780 Citrullus lanatus HOM05D000149 ORTHO05D000076 4.2e-07 57.8 69 46.4
COL.COLO4_36645 Corchorus olitorius HOM05D000149 ORTHO05D000076 4.2e-07 57.8 66 43.9
THA.LOC104811371 Tarenaya hassleriana HOM05D000149 ORTHO05D000076 5.5e-07 57.4 67 47.8
Nitab4.5_0005229g0010 Nicotiana tabacum HOM05D000149 ORTHO05D000076 7.1e-07 57.0 74 41.9
Oeu007377.1 Olea europaea HOM05D000149 ORTHO05D000076 7.1e-07 57.0 71 45.1
Sed0011085 Sechium edule HOM05D000149 ORTHO05D000076 7.1e-07 57.0 68 47.1
FAN22G1100 Fragaria x ananassa HOM05D000149 ORTHO05D000076 9.3e-07 56.6 73 41.1
Rhsim06G0029900 Rhododendron simsii HOM05D000149 ORTHO05D000076 9.3e-07 56.6 66 45.5
Oeu007383.1 Olea europaea HOM05D000149 ORTHO05D000076 1.2e-06 56.2 71 45.1
Rhsim06G0029800 Rhododendron simsii HOM05D000149 ORTHO05D000076 1.6e-06 55.8 66 47.0
FAN12G2118 Fragaria x ananassa HOM05D000149 ORTHO05D000076 2.1e-06 55.5 72 41.7
Cc10_g02560 Coffea canephora HOM05D000149 ORTHO05D000076 2.7e-06 55.1 69 44.9
CsaV3_3G045390 Cucumis sativus L. HOM05D000149 ORTHO05D000076 2.7e-06 55.1 65 44.6
HanXRQChr13g0395371 Helianthus annuus HOM05D000149 ORTHO05D000076 2.7e-06 55.1 67 43.3
TAR376G0045 Trochodendron aralioides HOM05D000149 ORTHO05D000076 2.7e-06 55.1 73 39.7
MELO3C003803.2 Cucumis melo HOM05D000149 ORTHO05D000076 3.5e-06 54.7 65 44.6
HanXRQChr13g0395351 Helianthus annuus HOM05D000149 ORTHO05D000076 3.5e-06 54.7 67 43.3
PGR044G0519 Punica granatum HOM05D000149 ORTHO05D000076 3.5e-06 54.7 67 46.3
FvH4_4g32960 Fragaria vesca HOM05D000149 ORTHO05D000076 4.6e-06 54.3 72 41.7
Sed0013539 Sechium edule HOM05D000149 ORTHO05D000076 4.6e-06 54.3 67 46.3
ECA247G2613 Erigeron canadensis HOM05D000149 ORTHO05D000076 6.0e-06 53.9 66 45.5
PGR044G1689 Punica granatum HOM05D000149 ORTHO05D000076 6.0e-06 53.9 73 41.1
Sopen04g034250 Solanum pennellii HOM05D000149 ORTHO05D000076 6.0e-06 53.9 66 42.4
Lj5g0008275 Lotus japonicus HOM05D000149 ORTHO05D000076 7.9e-06 53.5 70 42.9
Nn5g29683 Nelumbo nucifera HOM05D000149 ORTHO05D000076 7.9e-06 53.5 68 41.2
Sp1g17480 Schrenkiella parvula HOM05D000149 ORTHO05D000076 7.9e-06 53.5 76 40.8


User provided reference genes

Program Settings