Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 8.4e-61 236.9 124 100.0
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 1.6e-48 196.1 122 81.1
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 2.2e-48 195.7 122 82.0
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 2.2e-48 195.7 124 81.5
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 3.7e-48 194.9 124 79.0
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 3.7e-48 194.9 122 80.3
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 4.8e-48 194.5 120 82.5
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 6.3e-48 194.1 124 80.6
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 6.3e-48 194.1 124 79.8
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 8.2e-48 193.7 122 80.3
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 1.1e-47 193.4 126 78.6
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 1.1e-47 193.4 126 78.6
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 1.4e-47 193.0 124 79.8
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 1.8e-47 192.6 121 81.0
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 2.4e-47 192.2 124 80.6
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 2.4e-47 192.2 122 78.7
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 2.4e-47 192.2 124 79.0
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 3.1e-47 191.8 124 78.2
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 3.1e-47 191.8 126 77.8
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 4.1e-47 191.4 120 80.8
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 4.1e-47 191.4 124 79.0
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 5.3e-47 191.0 122 79.5
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 5.3e-47 191.0 120 80.8
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 9.0e-47 190.3 124 76.6
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 1.2e-46 189.9 122 77.9
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 1.5e-46 189.5 124 79.0
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 2.0e-46 189.1 118 81.4
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 5.9e-46 187.6 121 78.5
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 5.9e-46 187.6 122 76.2
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 5.9e-46 187.6 124 77.4
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 7.7e-46 187.2 124 79.0
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 7.7e-46 187.2 121 78.5
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 1.0e-45 186.8 124 78.2
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 1.3e-45 186.4 123 77.2
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 1.7e-45 186.0 118 81.4
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 2.2e-45 185.7 124 76.6
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 2.9e-45 185.3 124 78.2
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 3.8e-45 184.9 124 78.2
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 5.0e-45 184.5 118 80.5
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 6.5e-45 184.1 123 73.2
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 6.5e-45 184.1 121 76.9
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 1.1e-44 183.3 120 77.5
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 1.4e-44 183.0 122 72.1
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 3.2e-44 181.8 122 76.2
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 9.4e-44 180.3 121 75.2
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 9.4e-44 180.3 123 74.8
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 3.6e-43 178.3 154 63.6
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 7.9e-43 177.2 121 74.4
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 1.4e-42 176.4 122 74.6
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 1.4e-42 176.4 122 74.6
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 1.8e-42 176.0 118 77.1
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 5.1e-42 174.5 122 71.3
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 8.8e-42 173.7 123 73.2
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 2.0e-41 172.6 119 71.4
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 2.0e-41 172.6 125 72.8
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 3.3e-41 171.8 122 70.5
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 3.3e-41 171.8 122 71.3
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 4.3e-41 171.4 125 71.2
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 5.7e-41 171.0 119 71.4
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 7.4e-41 170.6 119 68.9
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 7.4e-41 170.6 121 70.2
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 7.4e-41 170.6 119 71.4
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 7.4e-41 170.6 122 70.5
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 9.7e-41 170.2 119 71.4
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 9.7e-41 170.2 119 70.6
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 1.7e-40 169.5 119 69.7
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 1.7e-40 169.5 119 69.7
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 1.7e-40 169.5 119 69.7
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.7e-40 169.5 121 69.4
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 1.7e-40 169.5 122 72.1
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 2.2e-40 169.1 122 66.4
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 3.7e-40 168.3 121 68.6
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 6.3e-40 167.5 120 74.2
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 1.1e-39 166.8 117 69.2
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 2.4e-39 165.6 119 68.1
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 2.4e-39 165.6 123 66.7
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 2.4e-39 165.6 118 67.8
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 5.3e-39 164.5 120 72.5
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 6.9e-39 164.1 123 65.0
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 2.6e-38 162.2 123 65.9
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 1.0e-37 160.2 117 66.7
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 1.3e-37 159.8 139 60.4
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 2.2e-37 159.1 122 63.1
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 3.8e-37 158.3 124 61.3
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 5.5e-36 154.5 102 73.5
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 5.5e-36 154.5 123 66.7
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 6.1e-35 151.0 113 65.5
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 7.9e-35 150.6 122 63.9
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 8.8e-34 147.1 121 62.0
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 2.6e-33 145.6 101 70.3
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 4.4e-33 144.8 90 82.2
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 2.8e-32 142.1 89 83.1
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 3.7e-32 141.7 105 65.7
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 5.3e-31 137.9 174 46.0
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 3.5e-30 135.2 93 76.3
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 4.5e-30 134.8 89 78.7
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.0e-29 133.7 89 78.7
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 1.7e-29 132.9 87 72.4
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 8.5e-29 130.6 100 66.0
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 1.9e-28 129.4 89 75.3
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 4.2e-28 128.3 90 71.1
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 4.7e-27 124.8 124 53.2
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 1.0e-26 123.6 96 67.7
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 3.0e-26 122.1 97 64.9
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 5.2e-26 121.3 89 66.3
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 8.8e-26 120.6 119 48.7
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 1.5e-25 119.8 81 70.4
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 3.7e-24 115.2 117 48.7
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 5.3e-23 111.3 114 45.6
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 2.2e-21 105.9 83 59.0
Migut.M00617 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.5e-20 103.2 124 47.6
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 1.2e-17 93.6 54 77.8
Nn3g20226 Nelumbo nucifera HOM05D007012 ORTHO05D008882 1.2e-11 73.6 120 43.3


User provided reference genes

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