Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01021549001 Vitis vinifera HOM05D007799 ORTHO05D009854 5.3e-142 507.7 255 100.0
QL05p055084 Quercus lobata HOM05D007799 ORTHO05D009854 4.5e-77 292.0 225 64.4
Manes.15G125000 Manihot esculenta HOM05D007799 ORTHO05D009854 4.2e-75 285.4 211 64.5
CiPaw.10G088800 Carya illinoinensis HOM05D007799 ORTHO05D009854 5.2e-73 278.5 222 60.8
Duzib192G0648 Durio zibethinus HOM05D007799 ORTHO05D009854 6.8e-73 278.1 218 60.6
Thecc.06G144300 Theobroma cacao HOM05D007799 ORTHO05D009854 3.7e-71 272.3 213 60.6
Lj6g0006831 Lotus japonicus HOM05D007799 ORTHO05D009854 6.3e-71 271.6 222 57.7
Prupe.4G085700 Prunus persica HOM05D007799 ORTHO05D009854 1.4e-70 270.4 221 61.1
CiPaw.09G119600 Carya illinoinensis HOM05D007799 ORTHO05D009854 5.4e-70 268.5 225 59.1
Cfa000897 Carpinus fangiana HOM05D007799 ORTHO05D009854 1.2e-69 267.3 221 59.3
Psat1g192080 Pisum sativum HOM05D007799 ORTHO05D009854 5.9e-69 265.0 223 59.2
MD10G1258100 Malus domestica HOM05D007799 ORTHO05D009854 1.0e-68 264.2 211 61.1
Duzib235G1165 Durio zibethinus HOM05D007799 ORTHO05D009854 5.0e-68 261.9 212 58.0
Rhsim13G0117700 Rhododendron simsii HOM05D007799 ORTHO05D009854 1.5e-67 260.4 203 62.6
Atru.chr10.1081 Acer truncatum HOM05D007799 ORTHO05D009854 1.9e-67 260.0 193 62.7
Medtr2g018670 Medicago truncatula HOM05D007799 ORTHO05D009854 2.5e-67 259.6 223 57.0
Glyma.15G090500 Glycine max HOM05D007799 ORTHO05D009854 3.3e-67 259.2 223 55.6
Nitab4.5_0005655g0010 Nicotiana tabacum HOM05D007799 ORTHO05D009854 4.3e-67 258.8 218 58.3
COL.COLO4_31009 Corchorus olitorius HOM05D007799 ORTHO05D009854 9.5e-67 257.7 202 61.4
Eucgr.D00266 Eucalyptus grandis HOM05D007799 ORTHO05D009854 1.6e-66 256.9 219 58.0
Glyma.13G221700 Glycine max HOM05D007799 ORTHO05D009854 3.6e-66 255.8 223 55.2
MD05G1279400 Malus domestica HOM05D007799 ORTHO05D009854 3.6e-66 255.8 220 57.3
MBI18_g11218_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 4.7e-66 255.4 210 56.2
RcHm_v2.0_Chr5g0014941 Rosa chinensis HOM05D007799 ORTHO05D009854 4.0e-65 252.3 227 55.9
Lalb_Chr15g0086631 Lupinus albus HOM05D007799 ORTHO05D009854 5.2e-65 251.9 215 57.2
Oeu032721.1 Olea europaea HOM05D007799 ORTHO05D009854 5.2e-65 251.9 196 62.8
Ca_00511_v3 Cicer arietinum L. HOM05D007799 ORTHO05D009854 1.5e-64 250.4 222 54.5
Cc00_g02020 Coffea canephora HOM05D007799 ORTHO05D009854 2.0e-64 250.0 213 58.7
VMungo0540G2150 Vigna mungo HOM05D007799 ORTHO05D009854 2.0e-64 250.0 224 54.0
Lalb_Chr20g0117681 Lupinus albus HOM05D007799 ORTHO05D009854 3.4e-64 249.2 233 52.8
Ciclev10016395m.g Citrus clementina HOM05D007799 ORTHO05D009854 4.4e-64 248.8 225 54.7
Gorai.010G237400 Gossypium raimondii HOM05D007799 ORTHO05D009854 5.8e-64 248.4 195 61.0
CSS0034958 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 7.5e-64 248.1 205 59.5
FAN16G3425 Fragaria x ananassa HOM05D007799 ORTHO05D009854 9.8e-64 247.7 222 55.4
TPR.G26257 Trifolium pratense HOM05D007799 ORTHO05D009854 9.8e-64 247.7 216 56.0
FvH4_3g05030 Fragaria vesca HOM05D007799 ORTHO05D009854 2.9e-63 246.1 229 55.0
Potri.011G081701 Populus trichocarpa HOM05D007799 ORTHO05D009854 2.9e-63 246.1 201 61.2
FAN11G0145 Fragaria x ananassa HOM05D007799 ORTHO05D009854 4.9e-63 245.4 222 55.4
FAN25G3832 Fragaria x ananassa HOM05D007799 ORTHO05D009854 4.9e-63 245.4 222 55.4
PGSC0003DMG400002292 Solanum tuberosum HOM05D007799 ORTHO05D009854 6.4e-63 245.0 217 54.8
CSS0035706 Camellia sinensis var. sinensis HOM05D007799 ORTHO05D009854 8.3e-63 244.6 205 59.0
Oeu031191.1 Olea europaea HOM05D007799 ORTHO05D009854 8.3e-63 244.6 195 62.6
PGR083G2472 Punica granatum HOM05D007799 ORTHO05D009854 1.1e-62 244.2 202 58.9
Gohir.A06G196000 Gossypium hirsutum HOM05D007799 ORTHO05D009854 1.9e-62 243.4 195 60.0
FAN21G3556 Fragaria x ananassa HOM05D007799 ORTHO05D009854 2.4e-62 243.0 222 55.0
MBI02_g12199_MAGBIO Magnolia biondii HOM05D007799 ORTHO05D009854 3.2e-62 242.7 207 54.1
Peaxi162Scf00045g02414 Petunia axillaris HOM05D007799 ORTHO05D009854 3.2e-62 242.7 217 55.8
Gohir.D06G203500 Gossypium hirsutum HOM05D007799 ORTHO05D009854 9.2e-62 241.1 188 61.2
arahy.Tifrunner.gnm1.ann1.80ML42 Arachis hypogaea HOM05D007799 ORTHO05D009854 1.6e-61 240.4 223 53.4
Actinidia32344 Actinidia chinensis HOM05D007799 ORTHO05D009854 2.7e-61 239.6 197 58.9
arahy.Tifrunner.gnm1.ann1.NZ6SRJ Arachis hypogaea HOM05D007799 ORTHO05D009854 6.0e-61 238.4 223 52.9
Migut.K01168 Erythranthe guttata HOM05D007799 ORTHO05D009854 1.3e-60 237.3 187 61.5
Glyma.08G099800 Glycine max HOM05D007799 ORTHO05D009854 1.3e-60 237.3 222 53.2
Dinv32213 Davidia involucrata HOM05D007799 ORTHO05D009854 5.0e-60 235.3 181 64.6
HanXRQChr15g0482011 Helianthus annuus HOM05D007799 ORTHO05D009854 1.1e-59 234.2 214 51.4
Glyma.05G143400 Glycine max HOM05D007799 ORTHO05D009854 1.9e-59 233.4 222 52.3
SalBow8G4130 Salvia bowleyana HOM05D007799 ORTHO05D009854 3.3e-59 232.6 202 56.9
Lsat_1_v5_gn_7_27461 Lactuca sativa HOM05D007799 ORTHO05D009854 4.3e-59 232.3 217 52.5
CANSAT35G1982 Cannabis sativa HOM05D007799 ORTHO05D009854 4.7e-58 228.8 235 54.9
Lalb_Chr13g0294011 Lupinus albus HOM05D007799 ORTHO05D009854 4.7e-58 228.8 222 50.5
ECA236G2997 Erigeron canadensis HOM05D007799 ORTHO05D009854 1.4e-57 227.3 224 48.7
DCAR_003890 Daucus carota HOM05D007799 ORTHO05D009854 1.8e-57 226.9 222 53.2
Haze_05684 Corylus avellana HOM05D007799 ORTHO05D009854 8.9e-57 224.6 221 53.8
VMungo0251G0945 Vigna mungo HOM05D007799 ORTHO05D009854 2.6e-56 223.0 212 51.9
Nn3g20329 Nelumbo nucifera HOM05D007799 ORTHO05D009854 2.2e-55 219.9 219 52.1
arahy.Tifrunner.gnm1.ann1.GW4I6G Arachis hypogaea HOM05D002205 ORTHO05D004847 8.3e-55 218.0 224 51.3
Nitab4.5_0000315g0030 Nicotiana tabacum HOM05D007799 ORTHO05D009854 1.4e-54 217.2 218 52.3
Medtr8g079475 Medicago truncatula HOM05D007799 ORTHO05D009854 1.9e-54 216.9 224 50.0
arahy.Tifrunner.gnm1.ann1.W0WEAA Arachis hypogaea HOM05D007799 ORTHO05D009854 2.4e-54 216.5 224 50.9
HanXRQChr04g0116571 Helianthus annuus HOM05D007799 ORTHO05D009854 9.2e-54 214.5 214 50.0
HPP92_026553 Vanilla planifolia HOM05D007799 ORTHO05D009854 1.0e-52 211.1 200 46.5
Phvul.002G177900 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 1.7e-52 210.3 223 47.1
vmacro03431 Vaccinium macrocarpon HOM05D007799 ORTHO05D009854 3.0e-52 209.5 224 50.9
ClCG03G006490 Citrullus lanatus HOM05D007799 ORTHO05D009854 1.6e-50 203.8 219 49.3
Phvul.006G168136 Phaseolus vulgaris HOM05D007799 ORTHO05D009854 4.7e-50 202.2 192 51.6
CsaV3_1G036880 Cucumis sativus L. HOM05D007799 ORTHO05D009854 4.0e-49 199.1 205 48.3
CDE12G0863 Ceratophyllum demersum HOM05D007799 ORTHO05D009854 5.4e-46 188.7 201 48.3
Sed0012400 Sechium edule HOM05D007799 ORTHO05D009854 7.1e-46 188.3 195 49.2
TPR.G9572 Trifolium pratense HOM05D007799 ORTHO05D009854 3.5e-45 186.0 186 51.1
HPP92_028169 Vanilla planifolia HOM05D007799 ORTHO05D009854 6.0e-45 185.3 197 43.1
ATR1098G006 Amborella trichopoda HOM05D007799 ORTHO05D009854 5.1e-44 182.2 198 43.4
TAR624G0778 Trochodendron aralioides HOM05D007799 ORTHO05D009854 1.5e-43 180.6 136 64.7
DCAR_007872 Daucus carota HOM05D007799 ORTHO05D009854 2.1e-42 176.8 240 42.5
Sopen08g008720 Solanum pennellii HOM05D007799 ORTHO05D009854 3.0e-36 156.4 160 48.8
Solyc08g023510.3 Solanum lycopersicum HOM05D007799 ORTHO05D009854 1.4e-33 147.5 153 47.7
Lj1C1169G11 Lonicera japonica HOM05D002205 ORTHO05D004847 1.0e-28 131.3 93 65.6
MELO3C035703.2 Cucumis melo HOM05D007799 ORTHO05D009854 8.4e-23 111.7 151 40.4
HPP92_026526 Vanilla planifolia HOM05D007799 ORTHO05D009854 3.5e-21 106.3 94 48.9
SEGI_29226 Sequoiadendron giganteum HOM05D007799 ORTHO05D009854 6.2e-18 95.5 182 30.2
TPR.G18987 Trifolium pratense HOM05D007799 ORTHO05D009854 3.5e-13 79.7 56 66.1


User provided reference genes

Program Settings