Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01021533001 Vitis vinifera HOM05D007178 ORTHO05D009022 3.7e-53 211.5 120 100.0
Dinv21533 Davidia involucrata HOM05D007178 ORTHO05D009022 1.4e-28 129.8 71 88.7
Duzib235G1408 Durio zibethinus HOM05D007178 ORTHO05D009022 1.8e-28 129.4 80 77.5
TAR460G0007 Trochodendron aralioides HOM05D007178 ORTHO05D009022 4.1e-28 128.3 103 68.9
ECA234G3634 Erigeron canadensis HOM05D007178 ORTHO05D009022 1.2e-27 126.7 100 69.0
CSS0006510 Camellia sinensis var. sinensis HOM05D007178 ORTHO05D009022 2.0e-27 125.9 72 88.9
CiPaw.09G121000 Carya illinoinensis HOM05D007178 ORTHO05D009022 3.5e-27 125.2 105 69.5
CiPaw.10G089700 Carya illinoinensis HOM05D007178 ORTHO05D009022 4.5e-27 124.8 105 63.8
Lj2g0013550 Lotus japonicus HOM05D007178 ORTHO05D009022 4.5e-27 124.8 74 78.4
Duzib160G0207 Durio zibethinus HOM05D007178 ORTHO05D009022 5.9e-27 124.4 81 74.1
Glyma.07G128900 Glycine max HOM05D007178 ORTHO05D009022 5.9e-27 124.4 78 78.2
Thecc.06G146700 Theobroma cacao HOM05D007178 ORTHO05D009022 1.7e-26 122.9 70 82.9
CANSAT35G0370 Cannabis sativa HOM05D007178 ORTHO05D009022 2.9e-26 122.1 70 81.4
Manes.17G073200 Manihot esculenta HOM05D007178 ORTHO05D009022 3.8e-26 121.7 70 82.9
Glyma.01G003100 Glycine max HOM05D007178 ORTHO05D009022 5.0e-26 121.3 83 71.1
DCAR_027898 Daucus carota HOM05D007178 ORTHO05D009022 6.5e-26 120.9 73 80.8
Lsat_1_v5_gn_4_29580 Lactuca sativa HOM05D007178 ORTHO05D009022 6.5e-26 120.9 73 83.6
Dinv32223 Davidia involucrata HOM05D007178 ORTHO05D009022 1.1e-25 120.2 77 80.5
TWI09G0402 Tripterygium wilfordii HOM05D007178 ORTHO05D009022 1.1e-25 120.2 80 76.2
Phvul.004G171100 Phaseolus vulgaris HOM05D007178 ORTHO05D009022 1.5e-25 119.8 74 78.4
Cpa.g.sc17.33 Carica papaya HOM05D007178 ORTHO05D009022 2.5e-25 119.0 75 77.3
Cfa000915 Carpinus fangiana HOM05D007178 ORTHO05D009022 2.5e-25 119.0 107 62.6
QL05p055487 Quercus lobata HOM05D007178 ORTHO05D009022 3.2e-25 118.6 69 78.3
vmacro03352 Vaccinium macrocarpon HOM05D007178 ORTHO05D009022 3.2e-25 118.6 110 62.7
Atru.chr10.1132 Acer truncatum HOM05D007178 ORTHO05D009022 5.5e-25 117.9 103 65.0
Gohir.D06G204000 Gossypium hirsutum HOM05D007178 ORTHO05D009022 5.5e-25 117.9 80 73.8
Sed0021444 Sechium edule HOM05D007178 ORTHO05D009022 5.5e-25 117.9 75 73.3
TWI73G0655 Tripterygium wilfordii HOM05D007178 ORTHO05D009022 5.5e-25 117.9 105 60.0
Ciclev10017932m.g Citrus clementina HOM05D007178 ORTHO05D009022 7.2e-25 117.5 79 74.7
Gohir.A10G042700 Gossypium hirsutum HOM05D007178 ORTHO05D009022 7.2e-25 117.5 79 75.9
Gohir.D10G043700 Gossypium hirsutum HOM05D007178 ORTHO05D009022 7.2e-25 117.5 79 75.9
Gorai.011G046500 Gossypium raimondii HOM05D007178 ORTHO05D009022 7.2e-25 117.5 79 75.9
Nn3g20425 Nelumbo nucifera HOM05D007178 ORTHO05D009022 7.2e-25 117.5 75 78.7
Nitab4.5_0005655g0060 Nicotiana tabacum HOM05D007178 ORTHO05D009022 9.4e-25 117.1 109 63.3
Cc00_g05770 Coffea canephora HOM05D007178 ORTHO05D009022 1.2e-24 116.7 75 77.3
Gohir.A06G196500 Gossypium hirsutum HOM05D007178 ORTHO05D009022 1.6e-24 116.3 79 72.2
Prupe.4G084100 Prunus persica HOM05D007178 ORTHO05D009022 3.6e-24 115.2 70 78.6
MBI18_g11238_MAGBIO Magnolia biondii HOM05D007178 ORTHO05D009022 4.7e-24 114.8 72 76.4
Solyc08g022120.3 Solanum lycopersicum HOM05D007178 ORTHO05D009022 4.7e-24 114.8 99 62.6
Sopen08g007660 Solanum pennellii HOM05D007178 ORTHO05D009022 4.7e-24 114.8 99 62.6
Sc05g0006030 Simmondsia chinensis HOM05D007178 ORTHO05D009022 8.0e-24 114.0 101 61.4
TPR.G35503 Trifolium pratense HOM05D007178 ORTHO05D009022 1.0e-23 113.6 74 73.0
unitig_26.g9766 Utricularia gibba HOM05D007178 ORTHO05D009022 1.0e-23 113.6 75 77.3
MELO3C007115.2 Cucumis melo HOM05D007178 ORTHO05D009022 1.4e-23 113.2 106 58.5
Psat1g049440 Pisum sativum HOM05D007178 ORTHO05D009022 1.4e-23 113.2 83 68.7
Gorai.010G238000 Gossypium raimondii HOM05D007178 ORTHO05D009022 1.8e-23 112.8 107 60.7
Nitab4.5_0000315g0010 Nicotiana tabacum HOM05D007178 ORTHO05D009022 1.8e-23 112.8 121 61.2
Aqoxy4G00077 Aquilegia oxysepala HOM05D007178 ORTHO05D009022 2.3e-23 112.5 79 74.7
CsaV3_6G051920 Cucumis sativus L. HOM05D007178 ORTHO05D009022 2.3e-23 112.5 106 57.5
MD05G1280800 Malus domestica HOM05D007178 ORTHO05D009022 5.2e-23 111.3 67 77.6
PSO541G3638 Papaver somniferum HOM05D007178 ORTHO05D009022 5.2e-23 111.3 73 76.7
PSO675G4358 Papaver somniferum HOM05D007178 ORTHO05D009022 5.2e-23 111.3 73 76.7
ClCG01G024800 Citrullus lanatus HOM05D007178 ORTHO05D009022 6.7e-23 110.9 106 55.7
Lalb_Chr22g0349731 Lupinus albus HOM05D007178 ORTHO05D009022 6.7e-23 110.9 77 74.0
FvH4_3g05190 Fragaria vesca HOM05D007178 ORTHO05D009022 1.2e-22 110.2 98 60.2
FAN16G3072 Fragaria x ananassa HOM05D007178 ORTHO05D009022 1.2e-22 110.2 98 60.2
FAN21G4020 Fragaria x ananassa HOM05D007178 ORTHO05D009022 1.2e-22 110.2 98 60.2
MD10G1259200 Malus domestica HOM05D007178 ORTHO05D009022 1.2e-22 110.2 66 77.3
RcHm_v2.0_Chr5g0014561 Rosa chinensis HOM05D007178 ORTHO05D009022 1.2e-22 110.2 76 69.7
Potri.004G133260 Populus trichocarpa HOM05D007178 ORTHO05D009022 2.0e-22 109.4 77 70.1
Ah.14g086320 Amaranthus hybridus HOM05D007178 ORTHO05D009022 2.6e-22 109.0 74 73.0
FAN25G1793 Fragaria x ananassa HOM05D007178 ORTHO05D009022 2.6e-22 109.0 98 60.2
Lalb_Chr14g0375331 Lupinus albus HOM05D007178 ORTHO05D009022 4.4e-22 108.2 74 71.6
EL10Ac8g19636 Beta vulgaris HOM05D007178 ORTHO05D009022 7.5e-22 107.5 103 58.3
Peaxi162Scf00045g02430 Petunia axillaris HOM05D007178 ORTHO05D009022 7.5e-22 107.5 96 67.7
THA.LOC104798400 Tarenaya hassleriana HOM05D007178 ORTHO05D009022 1.7e-21 106.3 100 59.0
Hund17773 Selenicereus undatus HOM05D007178 ORTHO05D009022 2.2e-21 105.9 97 59.8
PGR083G2020 Punica granatum HOM05D007178 ORTHO05D009022 2.8e-21 105.5 106 57.5
COL.COLO4_31031 Corchorus olitorius HOM05D007178 ORTHO05D009022 4.8e-21 104.8 65 75.4
AL7G35950 Arabidopsis lyrata HOM05D007178 ORTHO05D009022 1.4e-20 103.2 74 73.0
A01p10340 Brassica napus HOM05D007178 ORTHO05D009022 1.4e-20 103.2 76 68.4
BolC1t01205H Brassica oleracea HOM05D007178 ORTHO05D009022 1.4e-20 103.2 76 68.4
AT4G18400 Arabidopsis thaliana HOM05D007178 ORTHO05D009022 3.1e-20 102.1 105 59.0
BraA01t00981Z Brassica rapa HOM05D007178 ORTHO05D009022 3.1e-20 102.1 76 68.4
arahy.Tifrunner.gnm1.ann1.KYL6KL Arachis hypogaea HOM05D007178 ORTHO05D009022 4.1e-20 101.7 72 73.6
Carub.0007s2286 Capsella rubella HOM05D007178 ORTHO05D009022 7.0e-20 100.9 75 69.3
Thhalv10026632m.g Eutrema salsugineum HOM05D007178 ORTHO05D009022 2.0e-19 99.4 74 68.9
CARHR225220 Cardamine hirsuta HOM05D007178 ORTHO05D009022 3.5e-19 98.6 128 51.6
Sp7g15630 Schrenkiella parvula HOM05D007178 ORTHO05D009022 4.5e-19 98.2 105 56.2
BcaC09g51519 Brassica carinata HOM05D007178 ORTHO05D009022 1.0e-18 97.1 74 66.2
C01p12290 Brassica napus HOM05D007178 ORTHO05D009022 1.0e-18 97.1 74 66.2
HPP92_014792 Vanilla planifolia HOM05D007178 ORTHO05D009022 1.0e-18 97.1 68 66.2
BcaNung00005 Brassica carinata HOM05D007178 ORTHO05D009022 1.3e-18 96.7 71 69.0
Migut.M00887 Erythranthe guttata HOM05D007178 ORTHO05D009022 2.2e-18 95.9 109 56.0
vmacro05543 Vaccinium macrocarpon HOM05D007178 ORTHO05D009022 2.2e-18 95.9 80 65.0
A03p51260 Brassica napus HOM05D007178 ORTHO05D009022 2.9e-18 95.5 106 57.5
BraA03t14208Z Brassica rapa HOM05D007178 ORTHO05D009022 2.9e-18 95.5 106 57.5
FAN11G0307 Fragaria x ananassa HOM05D007178 ORTHO05D009022 3.8e-18 95.1 63 69.8
BcaC06g30589 Brassica carinata HOM05D007178 ORTHO05D009022 5.0e-18 94.7 118 50.0
CDE11G0374 Ceratophyllum demersum HOM05D007178 ORTHO05D009022 3.2e-17 92.0 103 47.6
CDE05G0627 Ceratophyllum demersum HOM05D007178 ORTHO05D009022 5.5e-17 91.3 71 57.7
VMungo0464G0906 Vigna mungo HOM05D007178 ORTHO05D009022 2.7e-16 89.0 47 87.2
Actinidia13672 Actinidia chinensis HOM05D007178 ORTHO05D009022 1.0e-15 87.0 49 87.8
arahy.Tifrunner.gnm1.ann1.WWKL6Q Arachis hypogaea HOM05D007178 ORTHO05D009022 4.0e-15 85.1 42 90.5
SGA_v2.0_scaffold1G00199 Striga asiatica HOM05D007178 ORTHO05D009022 5.2e-15 84.7 66 65.2
Medtr8g006645 Medicago truncatula HOM05D007178 ORTHO05D009022 1.2e-14 83.6 51 76.5
Os09g0569450 Oryza sativa ssp. japonica HOM05D007178 ORTHO05D009022 2.6e-14 82.4 74 58.1
Zm00001eb307790 Zea mays HOM05D007178 ORTHO05D009022 9.8e-14 80.5 73 57.5
Actinidia33661 Actinidia chinensis HOM05D007178 ORTHO05D009022 1.3e-13 80.1 106 55.7
Aa31LG6G1110 Aethionema arabicum HOM05D007178 ORTHO05D009022 2.2e-13 79.3 155 42.6
HanXRQChr07g0199391 Helianthus annuus HOM05D007178 ORTHO05D009022 8.3e-13 77.4 76 68.4
FvH4_7g10051 Fragaria vesca HOM05D007178 ORTHO05D009022 1.4e-12 76.6 51 72.5
ATR1098G109 Amborella trichopoda HOM05D007178 ORTHO05D009022 7.0e-12 74.3 44 77.3
FvH4_6g47640 Fragaria vesca HOM05D007178 ORTHO05D009022 1.0e-10 70.5 42 76.2
FAN14G2280 Fragaria x ananassa HOM05D007178 ORTHO05D009022 2.9e-10 68.9 42 73.8
FvH4_3g19851 Fragaria vesca HOM05D007178 ORTHO05D009022 6.6e-10 67.8 40 75.0
Ah.13g071740 Amaranthus hybridus HOM05D007178 ORTHO05D009022 1.2e-08 63.5 79 55.7
SEGI_20805 Sequoiadendron giganteum HOM05D019012 ORTHO05D020434 3.0e-07 58.9 74 41.9
FAN12G1070 Fragaria x ananassa HOM05D007178 ORTHO05D009022 8.9e-07 57.4 38 71.1
Gohir.D07G160820 Gossypium hirsutum HOM05D007178 ORTHO05D009022 8.9e-07 57.4 32 81.2


User provided reference genes

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