Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01021454001 Vitis vinifera HOM05D000300 ORTHO05D008505 8.1e-39 163.3 85 100.0
GSVIVG01021702001 Vitis vinifera HOM05D000300 ORTHO05D008505 2.2e-36 155.2 85 94.1
Dinv04313 Davidia involucrata HOM05D000300 ORTHO05D008505 1.4e-22 109.4 78 78.2
GSVIVG01014363001 Vitis vinifera HOM05D000300 ORTHO05D000383 3.1e-22 108.2 78 79.5
TWI38G1039 Tripterygium wilfordii HOM05D000300 ORTHO05D008505 1.2e-21 106.3 82 72.0
Haze_09412 Corylus avellana HOM05D000300 ORTHO05D008505 1.5e-21 105.9 78 75.6
Manes.03G111900 Manihot esculenta HOM05D000300 ORTHO05D008505 2.0e-21 105.5 78 74.4
Nn1g06576 Nelumbo nucifera HOM05D000300 ORTHO05D008505 2.6e-21 105.1 80 73.8
Peaxi162Scf00000g00412 Petunia axillaris HOM05D000300 ORTHO05D008505 2.6e-21 105.1 78 74.4
Cc05_g12170 Coffea canephora HOM05D000300 ORTHO05D000383 4.5e-21 104.4 78 74.4
Lj3g0005060 Lotus japonicus HOM05D000300 ORTHO05D008505 5.8e-21 104.0 78 73.1
Oeu060546.1 Olea europaea HOM05D000300 ORTHO05D008505 7.6e-21 103.6 78 74.4
Atru.chr2.2664 Acer truncatum HOM05D000300 ORTHO05D008505 1.0e-20 103.2 78 73.1
CiPaw.11G167900 Carya illinoinensis HOM05D000300 ORTHO05D008505 1.3e-20 102.8 78 73.1
MSTRG.6839 Avicennia marina HOM05D000300 ORTHO05D008505 3.8e-20 101.3 78 74.4
QL08p020830 Quercus lobata HOM05D000300 ORTHO05D008505 3.8e-20 101.3 77 71.4
arahy.Tifrunner.gnm1.ann1.UT5NS3 Arachis hypogaea HOM05D000300 ORTHO05D008505 4.9e-20 100.9 78 71.8
arahy.Tifrunner.gnm1.ann1.Z7GNQ3 Arachis hypogaea HOM05D000300 ORTHO05D008505 4.9e-20 100.9 78 71.8
Duzib213G0972 Durio zibethinus HOM05D000300 ORTHO05D008505 4.9e-20 100.9 78 73.1
Potri.011G121000 Populus trichocarpa HOM05D000300 ORTHO05D008505 4.9e-20 100.9 78 73.1
SGA_v2.0_scaffold34G13828 Striga asiatica HOM05D000300 ORTHO05D008505 6.5e-20 100.5 78 70.5
ClCG10G006870 Citrullus lanatus HOM05D000300 ORTHO05D008505 8.4e-20 100.1 78 71.8
Ciclev10007647m.g Citrus clementina HOM05D000300 ORTHO05D000383 8.4e-20 100.1 78 71.8
MELO3C016520.2 Cucumis melo HOM05D000300 ORTHO05D008505 8.4e-20 100.1 78 71.8
CsaV3_3G006220 Cucumis sativus L. HOM05D000300 ORTHO05D008505 1.1e-19 99.8 78 71.8
Glyma.13G278100 Glycine max HOM05D000300 ORTHO05D008505 1.1e-19 99.8 78 70.5
Phvul.005G071500 Phaseolus vulgaris HOM05D000300 ORTHO05D008505 1.1e-19 99.8 78 70.5
Solyc12g013790.3 Solanum lycopersicum HOM05D000300 ORTHO05D008505 1.1e-19 99.8 65 78.5
Sopen12g007100 Solanum pennellii HOM05D000300 ORTHO05D008505 1.1e-19 99.8 65 78.5
VMungo1080G0699 Vigna mungo HOM05D000300 ORTHO05D008505 1.1e-19 99.8 78 70.5
PGSC0003DMG400015358 Solanum tuberosum HOM05D000300 ORTHO05D008505 1.4e-19 99.4 78 70.5
Hma1.2p1_1618F.1_g293900 Hydrangea macrophylla HOM05D000300 ORTHO05D008505 1.9e-19 99.0 78 70.5
HPP92_025994 Vanilla planifolia HOM05D000300 ORTHO05D008505 1.9e-19 99.0 78 70.5
CSS0002162 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D008505 3.2e-19 98.2 78 70.5
Glyma.12G223300 Glycine max HOM05D000300 ORTHO05D008505 3.2e-19 98.2 78 69.2
unitig_747.g21571 Utricularia gibba HOM05D000300 ORTHO05D008505 3.2e-19 98.2 80 71.2
Aqoxy1G02483 Aquilegia oxysepala HOM05D000300 ORTHO05D008505 4.2e-19 97.8 67 79.1
Sabra11G0105000 Salix brachista HOM05D000300 ORTHO05D008505 4.2e-19 97.8 78 71.8
arahy.Tifrunner.gnm1.ann1.MM4FDC Arachis hypogaea HOM05D000300 ORTHO05D008505 5.5e-19 97.4 66 75.8
COL.COLO4_09413 Corchorus olitorius HOM05D000300 ORTHO05D008505 5.5e-19 97.4 78 70.5
FvH4_3g20100 Fragaria vesca HOM05D000300 ORTHO05D008505 5.5e-19 97.4 74 70.3
FAN11G2262 Fragaria x ananassa HOM05D000300 ORTHO05D008505 5.5e-19 97.4 74 70.3
FAN16G2347 Fragaria x ananassa HOM05D000300 ORTHO05D008505 5.5e-19 97.4 74 70.3
FAN21G2789 Fragaria x ananassa HOM05D000300 ORTHO05D008505 5.5e-19 97.4 74 70.3
Lalb_Chr20g0109791 Lupinus albus HOM05D000300 ORTHO05D008505 5.5e-19 97.4 78 69.2
Prupe.4G183600 Prunus persica HOM05D000300 ORTHO05D008505 5.5e-19 97.4 78 67.9
Thecc.07G080900 Theobroma cacao HOM05D000300 ORTHO05D008505 5.5e-19 97.4 78 70.5
Ca_01834_v3 Cicer arietinum L. HOM05D000300 ORTHO05D008505 1.2e-18 96.3 78 69.2
RcHm_v2.0_Chr5g0033901 Rosa chinensis HOM05D000300 ORTHO05D008505 1.2e-18 96.3 74 68.9
TPR.G38968 Trifolium pratense HOM05D000300 ORTHO05D008505 1.2e-18 96.3 78 69.2
ATR0680G062 Amborella trichopoda HOM05D000300 ORTHO05D008505 1.6e-18 95.9 80 67.5
Os04g0530300 Oryza sativa ssp. japonica HOM05D000300 ORTHO05D008505 1.6e-18 95.9 77 67.5
PSO541G3772 Papaver somniferum HOM05D000300 ORTHO05D008505 1.6e-18 95.9 78 69.2
PSO675G9140 Papaver somniferum HOM05D000300 ORTHO05D008505 2.1e-18 95.5 78 69.2
MD03G1225800 Malus domestica HOM05D000300 ORTHO05D008505 3.5e-18 94.7 67 73.1
MD11G1245300 Malus domestica HOM05D000300 ORTHO05D008505 3.5e-18 94.7 67 73.1
Psat3g101080 Pisum sativum HOM05D000300 ORTHO05D008505 3.5e-18 94.7 78 67.9
CANSAT56G2812 Cannabis sativa HOM05D000300 ORTHO05D008505 4.6e-18 94.4 78 67.9
Medtr2g079460 Medicago truncatula HOM05D000300 ORTHO05D008505 1.3e-17 92.8 78 66.7
Rhsim06G0197200 Rhododendron simsii HOM05D000300 ORTHO05D008505 1.3e-17 92.8 78 66.7
TAR626G1261 Trochodendron aralioides HOM05D000300 ORTHO05D008505 2.3e-17 92.0 65 76.9
vmacro11851 Vaccinium macrocarpon HOM05D000300 ORTHO05D008505 2.3e-17 92.0 78 65.4
Gohir.A04G028900 Gossypium hirsutum HOM05D000300 ORTHO05D008505 3.0e-17 91.7 78 65.4
Gohir.D05G358300 Gossypium hirsutum HOM05D000300 ORTHO05D008505 3.0e-17 91.7 78 65.4
Gorai.009G390800 Gossypium raimondii HOM05D000300 ORTHO05D008505 3.0e-17 91.7 78 65.4
Nitab4.5_0000662g0230 Nicotiana tabacum HOM05D000300 ORTHO05D008505 3.9e-17 91.3 74 67.6
MD11G1245600 Malus domestica HOM05D000300 ORTHO05D008505 2.5e-16 88.6 67 73.1
Mapoly0026s0140 Marchantia polymorpha HOM05D000300 ORTHO05D008505 2.5e-16 88.6 76 63.2
CDE02G0965 Ceratophyllum demersum HOM05D000300 ORTHO05D008505 4.3e-16 87.8 78 64.1
Migut.M00819 Erythranthe guttata HOM05D000300 ORTHO05D008505 5.7e-16 87.4 75 66.7
Thhalv10013922m.g Eutrema salsugineum HOM05D000300 ORTHO05D008505 2.2e-15 85.5 85 56.5
Sed0021435 Sechium edule HOM05D000300 ORTHO05D008505 2.2e-15 85.5 53 81.1
Hma1.2p1_1738F.1_g299980 Hydrangea macrophylla HOM05D000300 ORTHO05D008505 2.8e-15 85.1 53 81.1
Hund02219 Selenicereus undatus HOM05D000300 ORTHO05D008505 2.8e-15 85.1 67 64.2
SMO367G0821 Selaginella moellendorffii HOM05D000300 ORTHO05D008505 3.7e-15 84.7 80 60.0
DCAR_013093 Daucus carota HOM05D000300 ORTHO05D008505 4.8e-15 84.3 67 70.1
Nitab4.5_0007374g0020 Nicotiana tabacum HOM05D000300 ORTHO05D008505 4.8e-15 84.3 111 50.5
SalBow7G1295 Salvia bowleyana HOM05D000300 ORTHO05D008505 4.8e-15 84.3 76 64.5
SalBow7G3546 Salvia bowleyana HOM05D000300 ORTHO05D008505 4.8e-15 84.3 76 64.5
BcaC04g20418 Brassica carinata HOM05D000300 ORTHO05D008505 6.3e-15 84.0 85 55.3
A10p11170 Brassica napus HOM05D000300 ORTHO05D008505 6.3e-15 84.0 85 55.3
C09p43740 Brassica napus HOM05D000300 ORTHO05D008505 6.3e-15 84.0 85 55.3
BolC9t57259H Brassica oleracea HOM05D000300 ORTHO05D008505 6.3e-15 84.0 85 55.3
BraA10t43209Z Brassica rapa HOM05D000300 ORTHO05D008505 6.3e-15 84.0 85 55.3
PGR031G2267 Punica granatum HOM05D000300 ORTHO05D008505 8.2e-15 83.6 78 62.8
AL8G28840 Arabidopsis lyrata HOM05D000300 ORTHO05D008505 1.8e-14 82.4 78 60.3
AT5G53800 Arabidopsis thaliana HOM05D000300 ORTHO05D008505 1.8e-14 82.4 78 60.3
THA.LOC104813391 Tarenaya hassleriana HOM05D000300 ORTHO05D008505 3.1e-14 81.6 67 62.7
Ah.04g164930 Amaranthus hybridus HOM05D000300 ORTHO05D008505 4.1e-14 81.3 76 57.9
Carub.0008s1409 Capsella rubella HOM05D000300 ORTHO05D008505 4.1e-14 81.3 78 59.0
BcaB08g35739 Brassica carinata HOM05D000300 ORTHO05D008505 5.3e-14 80.9 78 57.7
Sp6g15870 Schrenkiella parvula HOM05D000300 ORTHO05D008505 1.2e-13 79.7 78 57.7
AUR62029376 Chenopodium quinoa HOM05D000300 ORTHO05D008505 5.9e-13 77.4 78 53.8
AUR62034261 Chenopodium quinoa HOM05D000300 ORTHO05D008505 1.3e-12 76.3 78 52.6
ECA240G3136 Erigeron canadensis HOM05D000300 ORTHO05D008505 2.9e-12 75.1 64 64.1
Cpa.g.sc80.49 Carica papaya HOM05D000300 ORTHO05D008505 5.0e-12 74.3 71 59.2
SEGI_35024 Sequoiadendron giganteum HOM05D000300 ORTHO05D008505 5.0e-12 74.3 63 60.3
Lsat_1_v5_gn_9_97040 Lactuca sativa HOM05D000300 ORTHO05D008505 1.4e-11 72.8 64 64.1
AagrBONN_evm.TU.Sc2ySwM_340.171 Anthoceros agrestis HOM05D000300 ORTHO05D008505 2.5e-11 72.0 65 60.0
arahy.Tifrunner.gnm1.ann1.5AH57W Arachis hypogaea HOM05D000300 ORTHO05D008505 3.2e-11 71.6 51 74.5
Zm00001eb075780 Zea mays HOM05D000300 ORTHO05D008505 4.2e-11 71.2 62 62.9
Aa31LG3G10120 Aethionema arabicum HOM05D000300 ORTHO05D008505 7.2e-11 70.5 113 42.5
arahy.Tifrunner.gnm1.ann1.F96EFF Arachis hypogaea HOM05D003444 ORTHO05D008505 2.1e-10 68.9 62 61.3
Pp3c25_13690 Physcomitrium patens HOM05D000300 ORTHO05D008505 3.6e-10 68.2 78 48.7
arahy.Tifrunner.gnm1.ann1.MF7AUF Arachis hypogaea HOM05D003391 ORTHO05D008505 1.8e-09 65.9 40 80.0
arahy.Tifrunner.gnm1.ann1.1E0HE3 Arachis hypogaea HOM05D001903 ORTHO05D013215 1.7e-07 59.3 39 74.4
arahy.Tifrunner.gnm1.ann1.ZC4B2S Arachis hypogaea HOM05D001903 ORTHO05D001847 3.1e-06 55.1 50 66.0


User provided reference genes

Program Settings