Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01021444001 Vitis vinifera HOM05D004997 ORTHO05D005921 3.0e-58 228.4 125 100.0
CSS0020008 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 2.9e-53 211.8 125 91.2
FAN11G3072 Fragaria x ananassa HOM05D004997 ORTHO05D005921 2.9e-53 211.8 124 91.9
Migut.M00914 Erythranthe guttata HOM05D004997 ORTHO05D005921 3.8e-53 211.5 124 91.1
TAR626G0896 Trochodendron aralioides HOM05D004997 ORTHO05D005921 6.5e-53 210.7 125 90.4
FvH4_3g05660 Fragaria vesca HOM05D004997 ORTHO05D005921 8.5e-53 210.3 124 91.1
MD10G1262900 Malus domestica HOM05D004997 ORTHO05D005921 1.1e-52 209.9 125 91.2
RcHm_v2.0_Chr5g0013981 Rosa chinensis HOM05D004997 ORTHO05D005921 1.1e-52 209.9 124 91.1
FAN21G2809 Fragaria x ananassa HOM05D004997 ORTHO05D005921 1.9e-52 209.1 124 91.1
Ciclev10017164m.g Citrus clementina HOM05D004997 ORTHO05D005921 2.5e-52 208.8 125 90.4
ECA233G0220 Erigeron canadensis HOM05D004997 ORTHO05D005921 3.2e-52 208.4 124 89.5
MD05G1284500 Malus domestica HOM05D004997 ORTHO05D005921 4.2e-52 208.0 125 90.4
PSO339G4484 Papaver somniferum HOM05D004997 ORTHO05D005921 4.2e-52 208.0 125 88.8
Cfa000953 Carpinus fangiana HOM05D004997 ORTHO05D005921 5.5e-52 207.6 125 88.0
Nn4g24866 Nelumbo nucifera HOM05D004997 ORTHO05D005921 5.5e-52 207.6 125 89.6
CANSAT35G1260 Cannabis sativa HOM05D004997 ORTHO05D005921 7.2e-52 207.2 125 88.8
SGA_v2.0_scaffold1G00167 Striga asiatica HOM05D004997 ORTHO05D005921 7.2e-52 207.2 125 88.0
Dinv32261 Davidia involucrata HOM05D004997 ORTHO05D005921 9.4e-52 206.8 125 88.0
MSTRG.7483 Avicennia marina HOM05D004997 ORTHO05D005921 1.2e-51 206.5 125 88.8
Eucgr.E02397 Eucalyptus grandis HOM05D004997 ORTHO05D005921 1.2e-51 206.5 125 88.0
Lj5g0010316 Lotus japonicus HOM05D004997 ORTHO05D005921 1.2e-51 206.5 125 87.2
PSO384G3576 Papaver somniferum HOM05D004997 ORTHO05D005921 1.2e-51 206.5 125 88.0
MSTRG.16239 Avicennia marina HOM05D004997 ORTHO05D005921 1.6e-51 206.1 125 87.2
HanXRQChr11g0340951 Helianthus annuus HOM05D004997 ORTHO05D005921 1.6e-51 206.1 125 88.0
Actinidia07691 Actinidia chinensis HOM05D004997 ORTHO05D005921 2.1e-51 205.7 125 88.0
Lj4g0009583 Lotus japonicus HOM05D004997 ORTHO05D005921 2.7e-51 205.3 125 86.4
Psat2g084800 Pisum sativum HOM05D004997 ORTHO05D005921 3.6e-51 204.9 125 87.2
Medtr5g055650 Medicago truncatula HOM05D004997 ORTHO05D005921 4.7e-51 204.5 125 87.2
Aqoxy3G00593 Aquilegia oxysepala HOM05D004997 ORTHO05D005921 6.1e-51 204.1 125 88.0
Lalb_Chr05g0222161 Lupinus albus HOM05D004997 ORTHO05D005921 6.1e-51 204.1 125 85.6
Sed0006544 Sechium edule HOM05D004997 ORTHO05D005921 8.0e-51 203.8 125 86.4
Solyc08g016420.3 Solanum lycopersicum HOM05D004997 ORTHO05D005921 8.0e-51 203.8 125 85.6
CiPaw.09G124400 Carya illinoinensis HOM05D004997 ORTHO05D005921 1.0e-50 203.4 125 86.4
Prupe.4G079900 Prunus persica HOM05D004997 ORTHO05D005921 1.0e-50 203.4 125 88.0
Sopen08g006800 Solanum pennellii HOM05D004997 ORTHO05D005921 1.0e-50 203.4 125 85.6
CiPaw.10G092400 Carya illinoinensis HOM05D004997 ORTHO05D005921 1.4e-50 203.0 125 84.8
Potri.004G131900 Populus trichocarpa HOM05D004997 ORTHO05D005921 1.4e-50 203.0 125 87.2
TWI38G0351 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 1.4e-50 203.0 125 87.2
VMungo0251G3606 Vigna mungo HOM05D004997 ORTHO05D005921 1.4e-50 203.0 125 85.6
HanXRQChr01g0020611 Helianthus annuus HOM05D004997 ORTHO05D005921 1.8e-50 202.6 124 89.5
TWI38G1166 Tripterygium wilfordii HOM05D004997 ORTHO05D005921 1.8e-50 202.6 125 87.2
Sed0005528 Sechium edule HOM05D004997 ORTHO05D005921 3.0e-50 201.8 123 87.8
MELO3C002717.2 Cucumis melo HOM05D004997 ORTHO05D005921 4.0e-50 201.4 125 84.8
Glyma.12G006600 Glycine max HOM05D004997 ORTHO05D005921 5.2e-50 201.1 125 84.0
Gorai.011G043400 Gossypium raimondii HOM05D004997 ORTHO05D005921 6.7e-50 200.7 125 84.8
Phvul.002G321900 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 6.7e-50 200.7 125 83.2
Gohir.A10G040300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 8.8e-50 200.3 125 84.8
Glyma.08G046600 Glycine max HOM05D004997 ORTHO05D005921 1.2e-49 199.9 125 83.2
Thecc.06G151500 Theobroma cacao HOM05D004997 ORTHO05D005921 1.5e-49 199.5 125 85.6
CARHR029400 Cardamine hirsuta HOM05D004997 ORTHO05D005921 2.6e-49 198.7 125 83.2
Gohir.D05G151300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 2.6e-49 198.7 125 84.8
Gorai.009G155300 Gossypium raimondii HOM05D004997 ORTHO05D005921 2.6e-49 198.7 125 84.8
unitig_32.g11442 Utricularia gibba HOM05D004997 ORTHO05D005921 4.4e-49 198.0 125 84.0
Duzib192G0549 Durio zibethinus HOM05D004997 ORTHO05D005921 5.7e-49 197.6 126 85.7
FAN25G0101 Fragaria x ananassa HOM05D004997 ORTHO05D005921 5.7e-49 197.6 142 78.9
SGA_v2.0_scaffold333G48998 Striga asiatica HOM05D004997 ORTHO05D005921 5.7e-49 197.6 138 79.7
THA.LOC104814295 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 5.7e-49 197.6 125 82.4
Carub.0001s2824 Capsella rubella HOM05D004997 ORTHO05D005921 9.7e-49 196.8 125 81.6
Sp1g25870 Schrenkiella parvula HOM05D004997 ORTHO05D005921 9.7e-49 196.8 125 82.4
Gohir.A05G148700 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.3e-48 196.4 125 84.8
AT1G29990 Arabidopsis thaliana HOM05D004997 ORTHO05D005921 1.7e-48 196.1 125 81.6
THA.LOC104812669 Tarenaya hassleriana HOM05D004997 ORTHO05D005921 2.2e-48 195.7 125 81.6
AL1G43880 Arabidopsis lyrata HOM05D004997 ORTHO05D005921 2.8e-48 195.3 125 80.8
Gohir.D10G041200 Gossypium hirsutum HOM05D004997 ORTHO05D005921 3.7e-48 194.9 125 83.2
arahy.Tifrunner.gnm1.ann1.06CE9J Arachis hypogaea HOM05D004997 ORTHO05D005921 2.4e-47 192.2 133 78.9
BcaC06g35482 Brassica carinata HOM05D004997 ORTHO05D005921 4.1e-47 191.4 125 79.2
BolC7t42045H Brassica oleracea HOM05D004997 ORTHO05D005921 4.1e-47 191.4 125 79.2
Gorai.002G185400 Gossypium raimondii HOM05D004997 ORTHO05D005921 1.6e-46 189.5 125 82.4
BcaB07g32600 Brassica carinata HOM05D004997 ORTHO05D005921 2.0e-46 189.1 125 78.4
A09p36530 Brassica napus HOM05D004997 ORTHO05D005921 2.0e-46 189.1 125 78.4
BraA09t39174Z Brassica rapa HOM05D004997 ORTHO05D005921 2.0e-46 189.1 125 78.4
C05p28750 Brassica napus HOM05D004997 ORTHO05D005921 7.7e-46 187.2 125 77.6
BolC5t31593H Brassica oleracea HOM05D004997 ORTHO05D005921 7.7e-46 187.2 125 77.6
Manes.11G058500 Manihot esculenta HOM05D004997 ORTHO05D005921 1.3e-45 186.4 107 92.5
Thhalv10009093m.g Eutrema salsugineum HOM05D004997 ORTHO05D005921 2.2e-45 185.7 125 78.4
HPP92_006252 Vanilla planifolia HOM05D004997 ORTHO05D005921 5.0e-45 184.5 125 76.8
TPR.G13287 Trifolium pratense HOM05D004997 ORTHO05D005921 6.5e-45 184.1 108 88.9
BcaB03g13847 Brassica carinata HOM05D004997 ORTHO05D005921 1.1e-44 183.3 125 78.4
PGR042G1500 Punica granatum HOM05D004997 ORTHO05D005921 1.9e-44 182.6 124 79.0
Atru.chr10.1243 Acer truncatum HOM05D004997 ORTHO05D005921 2.5e-44 182.2 107 91.6
Ah.09g232610 Amaranthus hybridus HOM05D000413 ORTHO05D000292 3.2e-44 181.8 108 87.0
CDE02G0055 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 4.2e-44 181.4 123 77.2
CDE09G0791 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 4.2e-44 181.4 123 76.4
Lsat_1_v5_gn_1_91801 Lactuca sativa HOM05D004997 ORTHO05D005921 4.2e-44 181.4 106 89.6
Os02g0246300 Oryza sativa ssp. japonica HOM05D004997 ORTHO05D005921 1.2e-43 179.9 118 78.0
ClCG03G007080 Citrullus lanatus HOM05D004997 ORTHO05D005921 2.7e-43 178.7 180 60.0
CAN.G134.135 Capsicum annuum HOM05D004997 ORTHO05D000105 6.1e-43 177.6 105 88.6
A07p10100 Brassica napus HOM05D004997 ORTHO05D005921 1.0e-42 176.8 129 75.2
Duzib235G0692 Durio zibethinus HOM05D004997 ORTHO05D005921 1.4e-42 176.4 106 88.7
CSS0046404 Camellia sinensis var. sinensis HOM05D004997 ORTHO05D005921 1.8e-42 176.0 105 89.5
CsaV3_1G032650 Cucumis sativus L. HOM05D004997 ORTHO05D005921 1.8e-42 176.0 107 86.0
MBI07_g26358_MAGBIO Magnolia biondii HOM05D004997 ORTHO05D005921 2.3e-42 175.6 108 85.2
Rhsim13G0211800 Rhododendron simsii HOM05D004997 ORTHO05D005921 2.3e-42 175.6 104 90.4
Prupe.3G104900 Prunus persica HOM05D004997 ORTHO05D005921 6.8e-42 174.1 105 89.5
FAN16G0953 Fragaria x ananassa HOM05D004997 ORTHO05D005921 8.8e-42 173.7 105 87.6
Gohir.D01G100600 Gossypium hirsutum HOM05D004997 ORTHO05D005921 1.2e-41 173.3 116 81.0
Hund21531 Selenicereus undatus HOM05D004997 ORTHO05D005921 1.2e-41 173.3 107 83.2
CAN.G134.136 Capsicum annuum HOM05D004997 ORTHO05D005921 1.5e-41 172.9 105 86.7
SEGI_33388 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 1.5e-41 172.9 125 72.8
Cc02_g37190 Coffea canephora HOM05D004997 ORTHO05D005921 5.7e-41 171.0 104 87.5
Gorai.002G125400 Gossypium raimondii HOM05D004997 ORTHO05D005921 9.8e-41 170.2 116 79.3
DCAR_027919 Daucus carota HOM05D000413 ORTHO05D000292 2.2e-40 169.1 119 78.2
arahy.Tifrunner.gnm1.ann1.FF119L Arachis hypogaea HOM05D004997 ORTHO05D005921 3.7e-40 168.3 114 79.8
BcaC05g27010 Brassica carinata HOM05D004997 ORTHO05D005921 1.1e-39 166.8 107 80.4
QL05p058391 Quercus lobata HOM05D004997 ORTHO05D005921 1.8e-39 166.0 123 75.6
ATR0743G157 Amborella trichopoda HOM05D004997 ORTHO05D005921 9.1e-39 163.7 106 81.1
BraA07t28803Z Brassica rapa HOM05D004997 ORTHO05D005921 1.2e-38 163.3 124 72.6
Mapoly0006s0079 Marchantia polymorpha HOM05D004997 ORTHO05D005921 1.6e-38 162.9 122 70.5
vmacro04021 Vaccinium macrocarpon HOM05D004997 ORTHO05D005921 3.8e-37 158.3 87 95.4
Pp3c22_1770 Physcomitrium patens HOM05D004997 ORTHO05D005921 8.6e-37 157.1 122 65.6
AagrBONN_evm.TU.Sc2ySwM_344.2433 Anthoceros agrestis HOM05D004997 ORTHO05D005921 1.1e-36 156.8 124 65.3
EL10Ac8g19712 Beta vulgaris HOM05D004997 ORTHO05D005921 2.5e-36 155.6 155 60.0
COL.COLO4_31081 Corchorus olitorius HOM05D004997 ORTHO05D005921 9.5e-36 153.7 87 92.0
Zm00001eb238610 Zea mays HOM05D004997 ORTHO05D005921 1.6e-35 152.9 118 69.5
C07p15580 Brassica napus HOM05D004997 ORTHO05D005921 2.1e-35 152.5 116 71.6
Oeu034156.1 Olea europaea HOM05D004997 ORTHO05D005921 3.6e-35 151.8 86 91.9
PGSC0003DMG400009647 Solanum tuberosum HOM05D004997 ORTHO05D005921 1.0e-34 150.2 86 89.5
Oeu052376.1 Olea europaea HOM05D004997 ORTHO05D005921 1.8e-34 149.4 86 89.5
SMO367G0874 Selaginella moellendorffii HOM05D004997 ORTHO05D005921 1.8e-34 149.4 107 70.1
AUR62039776 Chenopodium quinoa HOM05D004997 ORTHO05D005921 4.0e-34 148.3 98 78.6
Dinv30737 Davidia involucrata HOM05D004997 ORTHO05D005921 4.0e-34 148.3 85 91.8
Aa31LG6G5670 Aethionema arabicum HOM05D004997 ORTHO05D005921 5.2e-34 147.9 127 66.1
arahy.Tifrunner.gnm1.ann1.7IX92P Arachis hypogaea HOM05D004997 ORTHO05D005921 1.2e-33 146.7 86 87.2
Sc17g0004940 Simmondsia chinensis HOM05D004997 ORTHO05D005921 7.5e-33 144.1 86 84.9
QL06p022817 Quercus lobata HOM05D004997 ORTHO05D005921 1.7e-32 142.9 132 63.6
CAN.G3523.1 Capsicum annuum HOM05D004997 ORTHO05D005921 2.8e-32 142.1 86 86.0
Peaxi162Scf01211g00142 Petunia axillaris HOM05D004997 ORTHO05D005921 2.8e-32 142.1 88 86.4
Phvul.009G128800 Phaseolus vulgaris HOM05D004997 ORTHO05D005921 6.3e-32 141.0 87 85.1
CAN.G134.137 Capsicum annuum HOM05D004997 ORTHO05D005921 2.4e-31 139.0 89 80.9
Actinidia39569 Actinidia chinensis HOM05D004997 ORTHO05D005921 7.0e-31 137.5 125 66.4
Gohir.D01G149300 Gossypium hirsutum HOM05D004997 ORTHO05D005921 3.3e-28 128.6 95 75.8
SalBow8G3614 Salvia bowleyana HOM05D004997 ORTHO05D005921 4.3e-28 128.3 100 72.0
SEGI_19850 Sequoiadendron giganteum HOM05D004997 ORTHO05D005921 4.3e-28 128.3 86 76.7
Lsat_1_v5_gn_5_30841 Lactuca sativa HOM05D004997 ORTHO05D005921 1.8e-26 122.9 71 88.7
CDE02G2003 Ceratophyllum demersum HOM05D004997 ORTHO05D005921 5.8e-25 117.9 87 74.7
Nitab4.5_0000348g0240 Nicotiana tabacum HOM05D004997 ORTHO05D005921 1.3e-24 116.7 65 90.8
Nitab4.5_0010327g0020 Nicotiana tabacum HOM05D004997 ORTHO05D005921 1.3e-24 116.7 65 90.8
Haze_05586 Corylus avellana HOM05D004997 ORTHO05D005921 3.2e-23 112.1 80 76.2
Sabra04G0085700 Salix brachista HOM05D004997 ORTHO05D005921 2.0e-22 109.4 63 90.5
AUR62030207 Chenopodium quinoa HOM05D004997 ORTHO05D005921 4.6e-22 108.2 61 91.8
PRCOL_00000028 Prasinoderma coloniale HOM05D004997 ORTHO05D005921 9.5e-20 100.5 119 44.5
MCO01G210 Micromonas commoda HOM05D004997 ORTHO05D005921 1.4e-18 96.7 112 45.5
Zm00001eb151600 Zea mays HOM05D000394 ORTHO05D016690 5.2e-18 94.7 77 66.2
Zm00001eb258640 Zea mays HOM05D004997 ORTHO05D005921 6.8e-18 94.4 67 70.1
Manes.09G021201 Manihot esculenta HOM05D004997 ORTHO05D005921 1.5e-17 93.2 105 56.2
Zm00001eb225310 Zea mays HOM05D000901 ORTHO05D005921 1.5e-17 93.2 66 71.2
Zm00001eb310800 Zea mays HOM05D000394 ORTHO05D016690 1.5e-17 93.2 64 73.4
Zm00001eb139040 Zea mays HOM05D000901 ORTHO05D005921 7.5e-17 90.9 83 61.4
Zm00001eb269380 Zea mays HOM05D000901 ORTHO05D005921 1.7e-16 89.7 65 70.8
Zm00001eb344510 Zea mays HOM05D000901 ORTHO05D000768 1.9e-15 86.3 65 67.7
Cre12.g502750 Chlamydomonas reinhardtii HOM05D004997 ORTHO05D005921 5.4e-15 84.7 114 41.2
Haze_05599 Corylus avellana HOM05D004997 ORTHO05D005921 1.6e-14 83.2 51 84.3
Cfa022129 Carpinus fangiana HOM05D004997 ORTHO05D005921 7.3e-12 74.3 120 35.0
CBR_g48714 Chara braunii HOM05D004997 ORTHO05D005921 7.5e-09 64.3 118 39.0
arahy.Tifrunner.gnm1.ann1.MPJ1GQ Arachis hypogaea HOM05D004997 ORTHO05D005921 2.4e-07 59.3 39 79.5


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