Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01021423001 Vitis vinifera HOM05D007650 ORTHO05D009695 1.2e-75 286.6 156 100.0
Sabra11G0064400 Salix brachista HOM05D007650 ORTHO05D009695 5.3e-60 234.6 148 87.2
Potri.011G080900 Populus trichocarpa HOM05D007650 ORTHO05D009695 3.4e-59 231.9 146 87.7
Manes.17G068200 Manihot esculenta HOM05D007650 ORTHO05D009695 2.9e-58 228.8 148 84.5
QL05p059009 Quercus lobata HOM05D007650 ORTHO05D009695 1.1e-57 226.9 149 84.6
Hma1.2p1_0137F.1_g062480 Hydrangea macrophylla HOM05D007650 ORTHO05D009695 2.4e-57 225.7 149 81.2
MD05G1286900 Malus domestica HOM05D007650 ORTHO05D009695 3.2e-57 225.3 149 82.6
Prupe.4G078000 Prunus persica HOM05D007650 ORTHO05D009695 4.2e-57 224.9 149 81.9
TAR629G0225 Trochodendron aralioides HOM05D007650 ORTHO05D009695 5.4e-57 224.6 150 80.7
Atru.chr10.1319 Acer truncatum HOM05D007650 ORTHO05D009695 9.3e-57 223.8 159 79.9
Dinv30717 Davidia involucrata HOM05D007650 ORTHO05D009695 9.3e-57 223.8 148 83.1
CiPaw.09G126000 Carya illinoinensis HOM05D007650 ORTHO05D009695 3.5e-56 221.9 149 83.2
Rhsim13G0193900 Rhododendron simsii HOM05D007650 ORTHO05D009695 4.6e-56 221.5 149 81.2
arahy.Tifrunner.gnm1.ann1.IH3VZP Arachis hypogaea HOM05D007650 ORTHO05D009695 1.0e-55 220.3 150 82.7
Ca_18274_v3 Cicer arietinum L. HOM05D007650 ORTHO05D009695 1.0e-55 220.3 150 82.7
Haze_05565 Corylus avellana HOM05D007650 ORTHO05D009695 1.3e-55 219.9 149 83.9
vmacro09097 Vaccinium macrocarpon HOM05D007650 ORTHO05D009695 1.3e-55 219.9 149 81.2
Actinidia16723 Actinidia chinensis HOM05D007650 ORTHO05D009695 1.8e-55 219.5 149 80.5
CANSAT35G2040 Cannabis sativa HOM05D007650 ORTHO05D009695 1.8e-55 219.5 149 81.2
Cfa000966 Carpinus fangiana HOM05D007650 ORTHO05D009695 2.3e-55 219.2 149 82.6
FvH4_3g05890 Fragaria vesca HOM05D007650 ORTHO05D009695 3.9e-55 218.4 151 80.8
FAN16G2223 Fragaria x ananassa HOM05D007650 ORTHO05D009695 3.9e-55 218.4 151 80.1
TWI09G0653 Tripterygium wilfordii HOM05D007650 ORTHO05D009695 3.9e-55 218.4 149 79.2
Duzib192G0135 Durio zibethinus HOM05D007650 ORTHO05D009695 5.1e-55 218.0 145 82.1
Medtr4g094625 Medicago truncatula HOM05D007650 ORTHO05D009695 5.1e-55 218.0 144 84.7
Nn3g20684 Nelumbo nucifera HOM05D007650 ORTHO05D009695 6.7e-55 217.6 150 79.3
RcHm_v2.0_Chr5g0013551 Rosa chinensis HOM05D007650 ORTHO05D009695 6.7e-55 217.6 151 80.8
FAN21G2668 Fragaria x ananassa HOM05D007650 ORTHO05D009695 8.7e-55 217.2 151 80.8
Thecc.06G153200 Theobroma cacao HOM05D007650 ORTHO05D009695 1.1e-54 216.9 145 82.8
arahy.Tifrunner.gnm1.ann1.HZCZ32 Arachis hypogaea HOM05D007650 ORTHO05D009695 1.5e-54 216.5 158 78.5
FAN11G2937 Fragaria x ananassa HOM05D007650 ORTHO05D009695 1.9e-54 216.1 151 80.1
MBI07_g15281_MAGBIO Magnolia biondii HOM05D007650 ORTHO05D009695 1.9e-54 216.1 146 82.2
Phvul.002G194800 Phaseolus vulgaris HOM05D007650 ORTHO05D009695 2.5e-54 215.7 150 81.3
Lalb_Chr07g0188691 Lupinus albus HOM05D007650 ORTHO05D009695 3.3e-54 215.3 146 82.2
Psat7g090640 Pisum sativum HOM05D007650 ORTHO05D009695 3.3e-54 215.3 150 82.7
COL.COLO4_38298 Corchorus olitorius HOM05D007650 ORTHO05D009695 7.4e-54 214.2 149 77.9
Lj4g0007964 Lotus japonicus HOM05D007650 ORTHO05D009695 7.4e-54 214.2 151 80.8
VMungo0251G1744 Vigna mungo HOM05D007650 ORTHO05D009695 1.6e-53 213.0 150 78.7
ClCG01G024480 Citrullus lanatus HOM05D007650 ORTHO05D009695 2.1e-53 212.6 139 84.9
Actinidia19514 Actinidia chinensis HOM05D007650 ORTHO05D009695 2.8e-53 212.2 142 82.4
HanXRQChr17g0565021 Helianthus annuus HOM05D007650 ORTHO05D009695 2.8e-53 212.2 149 79.2
Nitab4.5_0001040g0130 Nicotiana tabacum HOM05D007650 ORTHO05D009695 2.8e-53 212.2 149 80.5
Glyma.08G083700 Glycine max HOM05D007650 ORTHO05D009695 4.8e-53 211.5 150 79.3
Peaxi162Scf00796g00117 Petunia axillaris HOM05D007650 ORTHO05D009695 4.8e-53 211.5 149 79.2
CAN.G257.1 Capsicum annuum HOM05D007650 ORTHO05D009695 6.2e-53 211.1 149 79.2
Gorai.010G238900 Gossypium raimondii HOM05D007650 ORTHO05D009695 6.2e-53 211.1 146 80.1
Nitab4.5_0001655g0220 Nicotiana tabacum HOM05D007650 ORTHO05D009695 6.2e-53 211.1 136 86.8
Gohir.D06G204800 Gossypium hirsutum HOM05D007650 ORTHO05D009695 8.1e-53 210.7 146 80.1
ECA234G0548 Erigeron canadensis HOM05D007650 ORTHO05D009695 1.1e-52 210.3 149 78.5
Glyma.05G129100 Glycine max HOM05D007650 ORTHO05D009695 1.1e-52 210.3 150 80.0
Gohir.A06G197300 Gossypium hirsutum HOM05D007650 ORTHO05D009695 1.1e-52 210.3 146 80.1
Lsat_1_v5_gn_4_30200 Lactuca sativa HOM05D007650 ORTHO05D009695 1.1e-52 210.3 149 77.9
MELO3C007146.2 Cucumis melo HOM05D007650 ORTHO05D009695 1.4e-52 209.9 137 83.9
TPR.G4852 Trifolium pratense HOM05D007650 ORTHO05D009695 1.4e-52 209.9 150 80.0
PGSC0003DMG400008313 Solanum tuberosum HOM05D007650 ORTHO05D009695 1.8e-52 209.5 149 79.2
Lj1A1185T62 Lonicera japonica HOM05D007650 ORTHO05D009695 2.4e-52 209.1 149 79.2
DCAR_005107 Daucus carota HOM05D007650 ORTHO05D009695 3.1e-52 208.8 139 81.3
PGR083G1882 Punica granatum HOM05D007650 ORTHO05D009695 5.3e-52 208.0 148 77.7
EL10As10g23973 Beta vulgaris HOM05D007650 ORTHO05D009695 6.9e-52 207.6 161 72.7
CsaV3_6G051610 Cucumis sativus L. HOM05D007650 ORTHO05D009695 6.9e-52 207.6 137 82.5
Solyc02g070800.2 Solanum lycopersicum HOM05D007650 ORTHO05D009695 2.6e-51 205.7 144 79.2
Sopen02g019910 Solanum pennellii HOM05D007650 ORTHO05D009695 3.4e-51 205.3 144 79.2
CDE02G4320 Ceratophyllum demersum HOM05D007650 ORTHO05D009695 4.5e-51 204.9 144 78.5
Zm00001eb296000 Zea mays HOM05D007650 ORTHO05D009695 9.9e-51 203.8 133 80.5
Cc09_g08850 Coffea canephora HOM05D007650 ORTHO05D009695 1.3e-50 203.4 149 76.5
Eucgr.D00307 Eucalyptus grandis HOM05D007650 ORTHO05D009695 2.9e-50 202.2 133 82.7
Os05g0565400 Oryza sativa ssp. japonica HOM05D007650 ORTHO05D009695 4.9e-50 201.4 134 79.9
Sopen02g019890 Solanum pennellii HOM05D007650 ORTHO05D009695 4.9e-50 201.4 144 77.8
Hund21519 Selenicereus undatus HOM05D007650 ORTHO05D009695 6.4e-50 201.1 163 71.2
Sc17g0005010 Simmondsia chinensis HOM05D007650 ORTHO05D009695 1.4e-49 199.9 161 72.7
Migut.H01373 Erythranthe guttata HOM05D007650 ORTHO05D009695 2.4e-49 199.1 149 73.8
Oeu040111.1 Olea europaea HOM05D007650 ORTHO05D009695 7.1e-49 197.6 149 73.2
ATR0585G132 Amborella trichopoda HOM05D007650 ORTHO05D009695 1.6e-48 196.4 134 80.6
SalBow7G1373 Salvia bowleyana HOM05D007650 ORTHO05D009695 6.0e-48 194.5 143 74.8
Aqoxy4G00120 Aquilegia oxysepala HOM05D007650 ORTHO05D009695 1.0e-47 193.7 149 70.5
unitig_21.g20640 Utricularia gibba HOM05D007650 ORTHO05D009695 1.0e-47 193.7 133 79.7
HPP92_024569 Vanilla planifolia HOM05D007650 ORTHO05D009695 3.3e-46 188.7 130 76.9
AUR62030238 Chenopodium quinoa HOM05D007650 ORTHO05D009695 1.7e-42 176.4 161 64.6
Ah.14g086550 Amaranthus hybridus HOM05D007650 ORTHO05D009695 2.9e-42 175.6 152 65.1
SMO174G0197 Selaginella moellendorffii HOM05D007650 ORTHO05D009695 1.4e-41 173.3 144 63.2
AagrBONN_evm.TU.Sc2ySwM_117.3317 Anthoceros agrestis HOM05D007650 ORTHO05D009695 1.8e-39 166.4 134 66.4
QL05p059017 Quercus lobata HOM05D007650 ORTHO05D009695 2.3e-39 166.0 150 66.7
Mapoly0064s0064 Marchantia polymorpha HOM05D007650 ORTHO05D009695 8.7e-39 164.1 137 66.4
Sopen02g019900 Solanum pennellii HOM05D007650 ORTHO05D009695 9.7e-38 160.6 118 76.3
AUR62027602 Chenopodium quinoa HOM05D007650 ORTHO05D009695 1.4e-33 146.7 161 58.4
Pp3c2_34550 Physcomitrium patens HOM05D007650 ORTHO05D009695 2.4e-28 129.4 94 71.3
Sed0021228 Sechium edule HOM05D007650 ORTHO05D009695 1.4e-23 113.6 66 86.4
TAR629G3449 Trochodendron aralioides HOM05D007650 ORTHO05D009695 7.4e-22 107.8 106 59.4
CAN.G637.51 Capsicum annuum HOM05D007650 ORTHO05D009695 1.8e-20 103.2 70 77.1
CBR_g31268 Chara braunii HOM05D007650 ORTHO05D009695 1.2e-19 100.5 136 46.3
CAN.G84.7 Capsicum annuum HOM05D007650 ORTHO05D009695 1.9e-17 93.2 68 75.0
TAR629G1582 Trochodendron aralioides HOM05D007650 ORTHO05D009695 6.3e-13 78.2 66 66.7


User provided reference genes

Program Settings