Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01021311001 Vitis vinifera HOM05D006968 ORTHO05D008748 2.5e-44 181.8 96 100.0
ClCG03G007290 Citrullus lanatus HOM05D006968 ORTHO05D008748 4.0e-26 121.3 96 64.6
CANSAT35G0299 Cannabis sativa HOM05D006968 ORTHO05D008748 6.8e-26 120.6 81 71.6
Dinv32313 Davidia involucrata HOM05D006968 ORTHO05D008748 9.8e-25 116.7 89 66.3
MELO3C002693.2 Cucumis melo HOM05D006968 ORTHO05D008748 1.3e-24 116.3 88 67.0
Actinidia07663 Actinidia chinensis HOM05D006968 ORTHO05D008748 2.9e-24 115.2 96 62.5
Cc02_g16200 Coffea canephora HOM05D006968 ORTHO05D008748 2.9e-24 115.2 87 64.4
CsaV3_1G032900 Cucumis sativus L. HOM05D006968 ORTHO05D008748 3.7e-24 114.8 87 66.7
FvH4_3g06600 Fragaria vesca HOM05D006968 ORTHO05D008748 3.7e-24 114.8 85 65.9
Potri.011G076600 Populus trichocarpa HOM05D006968 ORTHO05D008748 3.7e-24 114.8 92 63.0
Cfa001060 Carpinus fangiana HOM05D006968 ORTHO05D008748 4.9e-24 114.4 85 63.5
FAN16G1632 Fragaria x ananassa HOM05D006968 ORTHO05D008748 4.9e-24 114.4 85 65.9
FAN25G0438 Fragaria x ananassa HOM05D006968 ORTHO05D008748 4.9e-24 114.4 85 65.9
Haze_05452 Corylus avellana HOM05D006968 ORTHO05D008748 6.4e-24 114.0 85 65.9
Manes.17G062400 Manihot esculenta HOM05D006968 ORTHO05D008748 6.4e-24 114.0 83 66.3
Oeu042433.1 Olea europaea HOM05D006968 ORTHO05D008748 6.4e-24 114.0 85 64.7
CiPaw.09G132600 Carya illinoinensis HOM05D006968 ORTHO05D008748 8.3e-24 113.6 89 61.8
Thecc.06G160300 Theobroma cacao HOM05D006968 ORTHO05D008748 8.3e-24 113.6 84 64.3
Duzib192G0634 Durio zibethinus HOM05D006968 ORTHO05D008748 1.1e-23 113.2 84 63.1
Gorai.009G159100 Gossypium raimondii HOM05D006968 ORTHO05D008748 1.4e-23 112.8 86 60.5
CSS0042403 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 1.9e-23 112.5 83 68.7
RcHm_v2.0_Chr5g0012541 Rosa chinensis HOM05D006968 ORTHO05D008748 2.4e-23 112.1 85 64.7
Eucgr.E02869 Eucalyptus grandis HOM05D006968 ORTHO05D008748 3.2e-23 111.7 83 65.1
Rhsim02G0123400 Rhododendron simsii HOM05D006968 ORTHO05D008748 3.2e-23 111.7 85 67.1
CSS0021911 Camellia sinensis var. sinensis HOM05D006968 ORTHO05D008748 4.1e-23 111.3 84 66.7
PSO541G0278 Papaver somniferum HOM05D006968 ORTHO05D008748 4.1e-23 111.3 96 63.5
PSO675G0867 Papaver somniferum HOM05D006968 ORTHO05D008748 4.1e-23 111.3 96 63.5
Gohir.A05G152300 Gossypium hirsutum HOM05D006968 ORTHO05D008748 5.4e-23 110.9 86 59.3
MD10G1270500 Malus domestica HOM05D006968 ORTHO05D008748 5.4e-23 110.9 75 70.7
TAR627G0978 Trochodendron aralioides HOM05D006968 ORTHO05D008748 7.1e-23 110.5 84 65.5
PGR042G2565 Punica granatum HOM05D006968 ORTHO05D008748 1.2e-22 109.8 87 64.4
SGA_v2.0_scaffold1G00109 Striga asiatica HOM05D006968 ORTHO05D008748 1.2e-22 109.8 86 62.8
TWI73G0998 Tripterygium wilfordii HOM05D006968 ORTHO05D008748 1.2e-22 109.8 82 61.0
FAN11G1072 Fragaria x ananassa HOM05D006968 ORTHO05D008748 1.6e-22 109.4 88 63.6
QL05p052638 Quercus lobata HOM05D006968 ORTHO05D008748 1.6e-22 109.4 94 56.4
Gohir.D05G154800 Gossypium hirsutum HOM05D006968 ORTHO05D008748 2.1e-22 109.0 86 58.1
Cpa.g.sc51.7 Carica papaya HOM05D006968 ORTHO05D008748 2.7e-22 108.6 82 63.4
Sed0009046 Sechium edule HOM05D006968 ORTHO05D008748 2.7e-22 108.6 86 60.5
Nn3g20980 Nelumbo nucifera HOM05D006968 ORTHO05D008748 7.8e-22 107.1 85 64.7
Phvul.006G168900 Phaseolus vulgaris HOM05D006968 ORTHO05D008748 1.0e-21 106.7 80 66.2
Sabra11G0063700 Salix brachista HOM05D006968 ORTHO05D008748 1.0e-21 106.7 87 59.8
arahy.Tifrunner.gnm1.ann1.5H3RNB Arachis hypogaea HOM05D006968 ORTHO05D008748 1.3e-21 106.3 80 66.2
Ciclev10016662m.g Citrus clementina HOM05D006968 ORTHO05D008748 1.3e-21 106.3 80 62.5
VMungo0540G1786 Vigna mungo HOM05D006968 ORTHO05D008748 1.7e-21 105.9 80 65.0
arahy.Tifrunner.gnm1.ann1.9V28L0 Arachis hypogaea HOM05D006968 ORTHO05D008748 5.1e-21 104.4 80 65.0
GSVIVG01021310001 Vitis vinifera HOM05D006968 ORTHO05D008748 8.6e-21 103.6 72 80.6
Atru.chr10.1476 Acer truncatum HOM05D006968 ORTHO05D008748 1.1e-20 103.2 96 59.4
Lsat_1_v5_gn_0_21300 Lactuca sativa HOM05D006968 ORTHO05D008748 1.1e-20 103.2 85 56.5
Nitab4.5_0003913g0060 Nicotiana tabacum HOM05D006968 ORTHO05D008748 1.1e-20 103.2 87 54.0
SGA_v2.0_scaffold273G46455 Striga asiatica HOM05D006968 ORTHO05D008748 1.1e-20 103.2 83 61.4
MSTRG.16189 Avicennia marina HOM05D006968 ORTHO05D008748 1.5e-20 102.8 88 61.4
Glyma.13G222900 Glycine max HOM05D006968 ORTHO05D008748 1.5e-20 102.8 80 63.8
Lsat_1_v5_gn_1_112261 Lactuca sativa HOM05D006968 ORTHO05D008748 1.9e-20 102.4 85 57.6
Prupe.4G071300 Prunus persica HOM05D006968 ORTHO05D008748 1.9e-20 102.4 75 68.0
SalBow8G0548 Salvia bowleyana HOM05D006968 ORTHO05D008748 1.9e-20 102.4 89 55.1
SalBow8G1131 Salvia bowleyana HOM05D006968 ORTHO05D008748 1.9e-20 102.4 89 55.1
CiPaw.09G132700 Carya illinoinensis HOM05D006968 ORTHO05D008748 2.5e-20 102.1 89 55.1
Solyc02g071600.4 Solanum lycopersicum HOM05D006968 ORTHO05D008748 2.5e-20 102.1 83 57.8
COL.COLO4_22824 Corchorus olitorius HOM05D006968 ORTHO05D008748 3.3e-20 101.7 86 55.8
SGA_v2.0_scaffold18G08383 Striga asiatica HOM05D006968 ORTHO05D008748 3.3e-20 101.7 83 60.2
HanXRQChr02g0055401 Helianthus annuus HOM05D006968 ORTHO05D008748 5.6e-20 100.9 87 52.9
Nitab4.5_0010884g0010 Nicotiana tabacum HOM05D006968 ORTHO05D008748 5.6e-20 100.9 87 52.9
PGSC0003DMG400007245 Solanum tuberosum HOM05D006968 ORTHO05D008748 5.6e-20 100.9 83 56.6
Hund21573 Selenicereus undatus HOM05D006968 ORTHO05D008748 7.3e-20 100.5 80 57.5
Lj2A313T77 Lonicera japonica HOM05D006968 ORTHO05D008748 9.5e-20 100.1 90 58.9
AUR62035842 Chenopodium quinoa HOM05D006968 ORTHO05D008748 1.6e-19 99.4 86 57.0
CAN.G257.117 Capsicum annuum HOM05D006968 ORTHO05D008748 3.6e-19 98.2 87 51.7
Lj6g0008479 Lotus japonicus HOM05D006968 ORTHO05D008748 3.6e-19 98.2 85 55.3
HanXRQChr02g0055391 Helianthus annuus HOM05D006968 ORTHO05D008748 4.7e-19 97.8 89 49.4
unitig_748.g7643 Utricularia gibba HOM05D001519 ORTHO05D008748 4.7e-19 97.8 79 59.5
Sopen02g020620 Solanum pennellii HOM05D006968 ORTHO05D008748 6.2e-19 97.4 84 57.1
MD00G1093500 Malus domestica HOM05D006968 ORTHO05D008748 8.1e-19 97.1 83 57.8
DCAR_007922 Daucus carota HOM05D000065 ORTHO05D000162 1.8e-18 95.9 86 53.5
QL05p052648 Quercus lobata HOM05D006968 ORTHO05D008748 3.1e-18 95.1 66 68.2
ECA248G0802 Erigeron canadensis HOM05D006968 ORTHO05D008748 8.9e-18 93.6 88 50.0
EL10Ac8g19830 Beta vulgaris HOM05D006968 ORTHO05D008748 1.2e-17 93.2 80 58.8
Medtr2g018105 Medicago truncatula HOM05D006968 ORTHO05D008748 1.2e-17 93.2 85 55.3
Actinidia39540 Actinidia chinensis HOM05D006968 ORTHO05D008748 2.6e-17 92.0 88 58.0
Aqoxy1G01892 Aquilegia oxysepala HOM05D006968 ORTHO05D008748 2.6e-17 92.0 90 54.4
Ah.02g125570 Amaranthus hybridus HOM05D006968 ORTHO05D008748 3.4e-17 91.7 80 52.5
TPR.G4467 Trifolium pratense HOM05D006968 ORTHO05D008748 3.4e-17 91.7 78 57.7
Lalb_Chr18g0055011 Lupinus albus HOM05D006968 ORTHO05D008748 5.8e-17 90.9 77 61.0
Ca_00496_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 9.9e-17 90.1 80 56.2
Ca_30235_v3 Cicer arietinum L. HOM05D006968 ORTHO05D008748 9.9e-17 90.1 80 56.2
Psat1g192720 Pisum sativum HOM05D006968 ORTHO05D008748 9.9e-17 90.1 80 55.0
BolC7t43414H Brassica oleracea HOM05D006968 ORTHO05D008748 1.1e-15 86.7 87 50.6
AT5G45660 Arabidopsis thaliana HOM05D006968 ORTHO05D008748 1.4e-15 86.3 87 49.4
THA.LOC104798448 Tarenaya hassleriana HOM05D006968 ORTHO05D008748 1.4e-15 86.3 82 52.4
Thhalv10001012m.g Eutrema salsugineum HOM05D006968 ORTHO05D008748 1.9e-15 85.9 87 48.3
Carub.0008s0235 Capsella rubella HOM05D006968 ORTHO05D008748 2.4e-15 85.5 87 49.4
BcaC06g34413 Brassica carinata HOM05D006968 ORTHO05D008748 3.2e-15 85.1 87 49.4
A06p46470 Brassica napus HOM05D006968 ORTHO05D008748 3.2e-15 85.1 87 49.4
C07p28780 Brassica napus HOM05D006968 ORTHO05D008748 3.2e-15 85.1 87 49.4
Sc05g0006720 Simmondsia chinensis HOM05D000065 ORTHO05D000162 3.2e-15 85.1 68 61.8
SEGI_37019 Sequoiadendron giganteum HOM05D006968 ORTHO05D008748 7.1e-15 84.0 89 43.8
AL8G12990 Arabidopsis lyrata HOM05D006968 ORTHO05D008748 9.2e-15 83.6 87 48.3
FvH4_4g34020 Fragaria vesca HOM05D006968 ORTHO05D008748 9.2e-15 83.6 92 51.1
FAN12G2652 Fragaria x ananassa HOM05D006968 ORTHO05D008748 9.2e-15 83.6 93 50.5
Sp2g10550 Schrenkiella parvula HOM05D006968 ORTHO05D008748 1.2e-14 83.2 87 48.3
BraA06t27520Z Brassica rapa HOM05D006968 ORTHO05D008748 1.6e-14 82.8 87 48.3
BcaC06g31531 Brassica carinata HOM05D006968 ORTHO05D008748 2.1e-14 82.4 87 49.4
CARHR176320 Cardamine hirsuta HOM05D006968 ORTHO05D008748 7.8e-14 80.5 87 46.0
HPP92_009092 Vanilla planifolia HOM05D006968 ORTHO05D008748 5.1e-13 77.8 85 48.2
CDE10G0144 Ceratophyllum demersum HOM05D000065 ORTHO05D008748 7.3e-12 73.9 68 54.4
Pp3c13_11400 Physcomitrium patens HOM05D006968 ORTHO05D008748 1.6e-11 72.8 90 37.8
Aa31LG9G7390 Aethionema arabicum HOM05D006968 ORTHO05D008748 3.6e-11 71.6 82 43.9
FAN22G0056 Fragaria x ananassa HOM05D006968 ORTHO05D008748 3.6e-11 71.6 77 51.9
AUR62027636 Chenopodium quinoa HOM05D006968 ORTHO05D008748 8.1e-11 70.5 83 44.6
Os01g0727900 Oryza sativa ssp. japonica HOM05D006968 ORTHO05D008748 1.1e-10 70.1 78 46.2
Zm00001eb045900 Zea mays HOM05D006968 ORTHO05D008748 1.4e-10 69.7 89 40.4
Lalb_Chr18g0055041 Lupinus albus HOM05D006968 ORTHO05D008748 2.4e-10 68.9 67 52.2
SGA_v2.0_scaffold305G47958 Striga asiatica HOM05D000046 ORTHO05D405780 3.1e-10 68.6 54 63.0
Zm00001eb154290 Zea mays HOM05D006968 ORTHO05D008748 1.5e-09 66.2 89 39.3
Haze_05450 Corylus avellana HOM05D006968 ORTHO05D164033 2.0e-09 65.9 50 64.0
TWI53G1777 Tripterygium wilfordii HOM05D006968 ORTHO05D008748 2.0e-09 65.9 71 49.3
ECA248G3047 Erigeron canadensis HOM05D006968 ORTHO05D008748 3.4e-09 65.1 114 37.7
SGA_v2.0_scaffold36G14429 Striga asiatica HOM05D003154 ORTHO05D003565 3.4e-09 65.1 60 56.7


User provided reference genes

Program Settings