Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01021187001 Vitis vinifera HOM05D004704 ORTHO05D005384 3.1e-306 1054.3 531 100.0
Duzib192G0914 Durio zibethinus HOM05D004704 ORTHO05D005384 4.0e-176 622.1 516 64.7
Thecc.06G174000 Theobroma cacao HOM05D004704 ORTHO05D005384 2.0e-175 619.8 551 62.4
Potri.004G054500 Populus trichocarpa HOM05D004704 ORTHO05D005384 3.2e-173 612.5 550 61.8
COL.COLO4_31331 Corchorus olitorius HOM05D004704 ORTHO05D005384 5.4e-173 611.7 555 61.4
Sabra11G0046100 Salix brachista HOM05D004704 ORTHO05D005384 1.0e-171 607.4 548 61.1
Manes.17G053900 Manihot esculenta HOM05D004704 ORTHO05D005384 1.7e-171 606.7 542 63.5
Potri.011G064300 Populus trichocarpa HOM05D004704 ORTHO05D005384 1.7e-171 606.7 548 61.3
PGR004G2343 Punica granatum HOM05D004704 ORTHO05D005384 5.0e-171 605.1 543 60.8
Oeu062343.1 Olea europaea HOM05D004704 ORTHO05D005384 4.3e-170 602.1 494 65.0
PGR004G2271 Punica granatum HOM05D004704 ORTHO05D005384 5.6e-170 601.7 545 59.6
Gohir.D06G134300 Gossypium hirsutum HOM05D004704 ORTHO05D005384 6.2e-169 598.2 544 60.8
Oeu012062.1 Olea europaea HOM05D004704 ORTHO05D005384 1.1e-168 597.4 463 68.0
Oeu041796.1 Olea europaea HOM05D004704 ORTHO05D005384 1.1e-168 597.4 497 65.0
Gorai.010G156000 Gossypium raimondii HOM05D004704 ORTHO05D005384 1.4e-168 597.0 544 60.7
Nn1g04361 Nelumbo nucifera HOM05D004704 ORTHO05D005384 2.3e-168 596.3 551 60.6
Oeu041801.1 Olea europaea HOM05D004704 ORTHO05D005384 3.1e-168 595.9 497 64.8
TWI38G0698 Tripterygium wilfordii HOM05D004704 ORTHO05D005384 6.8e-168 594.7 550 59.6
Cc02_g14600 Coffea canephora HOM05D004704 ORTHO05D005384 2.6e-167 592.8 551 57.7
Sabra04G0035600 Salix brachista HOM05D004704 ORTHO05D005384 7.5e-167 591.3 548 60.2
CSS0042475 Camellia sinensis var. sinensis HOM05D004704 ORTHO05D005384 1.2e-161 573.9 524 62.4
Eucgr.D00532 Eucalyptus grandis HOM05D004704 ORTHO05D005384 3.6e-161 572.4 547 59.6
Aqoxy1G03204 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 1.8e-160 570.1 551 57.5
Glyma.13G231200 Glycine max HOM05D004704 ORTHO05D005384 3.4e-159 565.8 544 58.6
MBI06_g18005_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 1.9e-157 560.1 547 58.9
TAR629G2327 Trochodendron aralioides HOM05D004704 ORTHO05D005384 3.2e-157 559.3 544 58.1
TAR629G2609 Trochodendron aralioides HOM05D004704 ORTHO05D005384 4.1e-157 558.9 544 57.9
MBI06_g18007_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 5.4e-157 558.5 552 57.1
Nitab4.5_0002076g0080 Nicotiana tabacum HOM05D004704 ORTHO05D005384 9.2e-157 557.8 561 55.6
CiPaw.09G067900 Carya illinoinensis HOM05D004704 ORTHO05D005384 1.2e-156 557.4 538 58.7
Peaxi162Scf00200g00121 Petunia axillaris HOM05D004704 ORTHO05D005384 2.1e-156 556.6 559 54.4
Lsat_1_v5_gn_7_23201 Lactuca sativa HOM05D004704 ORTHO05D005384 7.8e-156 554.7 546 57.3
CiPaw.09G067800 Carya illinoinensis HOM05D004704 ORTHO05D005384 1.3e-155 553.9 543 58.6
Solyc03g006230.1 Solanum lycopersicum HOM05D004704 ORTHO05D005384 1.5e-154 550.4 562 55.2
Eucgr.D00531 Eucalyptus grandis HOM05D004704 ORTHO05D005384 1.9e-154 550.1 544 57.0
TAR627G0020 Trochodendron aralioides HOM05D004704 ORTHO05D005384 4.3e-154 548.9 555 56.8
TAR706G0003 Trochodendron aralioides HOM05D004704 ORTHO05D005384 4.3e-154 548.9 555 56.8
PGSC0003DMG400004386 Solanum tuberosum HOM05D004704 ORTHO05D005384 6.2e-153 545.0 561 54.7
Cfa000584 Carpinus fangiana HOM05D004704 ORTHO05D005384 3.1e-152 542.7 539 57.5
QL05p046090 Quercus lobata HOM05D004704 ORTHO05D005384 4.4e-151 538.9 541 56.0
DCAR_028021 Daucus carota HOM05D004704 ORTHO05D005384 1.3e-150 537.3 549 55.2
DCAR_004019 Daucus carota HOM05D004704 ORTHO05D005384 3.8e-150 535.8 551 55.4
DCAR_004020 Daucus carota HOM05D004704 ORTHO05D005384 6.4e-150 535.0 553 55.3
HanXRQChr04g0115831 Helianthus annuus HOM05D004704 ORTHO05D005384 6.4e-150 535.0 548 55.8
CAN.G2115.3 Capsicum annuum HOM05D004704 ORTHO05D005384 5.4e-149 531.9 567 52.7
Migut.M01052 Erythranthe guttata HOM05D004704 ORTHO05D005384 7.1e-149 531.6 560 55.4
BraA03t14222Z Brassica rapa HOM05D004704 ORTHO05D005384 2.7e-148 529.6 535 56.6
QL05p045074 Quercus lobata HOM05D004704 ORTHO05D005384 2.7e-148 529.6 540 55.6
PGSC0003DMG400018011 Solanum tuberosum HOM05D004704 ORTHO05D005384 3.5e-148 529.3 555 53.9
Nitab4.5_0001375g0020 Nicotiana tabacum HOM05D004704 ORTHO05D005384 4.6e-148 528.9 549 54.5
PSO782G0987 Papaver somniferum HOM05D004704 ORTHO05D005384 7.8e-148 528.1 537 55.7
ECA236G1293 Erigeron canadensis HOM05D004704 ORTHO05D005384 1.0e-147 527.7 553 55.3
PSO063G2883 Papaver somniferum HOM05D004704 ORTHO05D005384 7.3e-146 521.5 564 53.2
A03p51400 Brassica napus HOM05D004704 ORTHO05D005384 6.2e-145 518.5 556 54.5
BcaNung02719 Brassica carinata HOM05D004704 ORTHO05D005384 8.1e-145 518.1 556 54.1
C07p49820 Brassica napus HOM05D004704 ORTHO05D005384 2.4e-144 516.5 556 53.8
BolC7t45484H Brassica oleracea HOM05D004704 ORTHO05D005384 2.4e-144 516.5 556 53.8
PSO063G6793 Papaver somniferum HOM05D004704 ORTHO05D005384 4.0e-144 515.8 521 56.0
arahy.Tifrunner.gnm1.ann1.IMTX5S Arachis hypogaea HOM05D004704 ORTHO05D005384 5.3e-144 515.4 549 54.1
Sp7g15490 Schrenkiella parvula HOM05D004704 ORTHO05D005384 6.9e-144 515.0 557 52.8
ClCG01G023620 Citrullus lanatus HOM05D004704 ORTHO05D005384 9.0e-144 514.6 539 53.6
BcaC06g30574 Brassica carinata HOM05D004704 ORTHO05D005384 2.6e-143 513.1 556 53.4
CsaV3_6G050770 Cucumis sativus L. HOM05D004704 ORTHO05D005384 2.6e-143 513.1 546 54.6
Carub.0007s2269 Capsella rubella HOM05D004704 ORTHO05D005384 3.4e-143 512.7 557 54.0
AL7G35740 Arabidopsis lyrata HOM05D004704 ORTHO05D005384 2.9e-142 509.6 556 53.2
Rhsim13G0106000 Rhododendron simsii HOM05D004704 ORTHO05D005384 2.9e-142 509.6 580 52.4
SalBow8G1161 Salvia bowleyana HOM05D004704 ORTHO05D005384 2.9e-142 509.6 481 60.1
Lj1P1195T10 Lonicera japonica HOM05D004704 ORTHO05D005384 1.1e-141 507.7 410 66.1
arahy.Tifrunner.gnm1.ann1.7UF87C Arachis hypogaea HOM05D004704 ORTHO05D005384 1.4e-141 507.3 548 53.3
Rhsim13G0106100 Rhododendron simsii HOM05D004704 ORTHO05D005384 1.9e-141 506.9 559 53.5
Thhalv10024794m.g Eutrema salsugineum HOM05D004704 ORTHO05D005384 5.4e-141 505.4 553 52.8
Dinv04632 Davidia involucrata HOM05D004704 ORTHO05D005384 4.6e-140 502.3 501 58.9
MELO3C007223.2 Cucumis melo HOM05D004704 ORTHO05D005384 6.0e-140 501.9 546 53.3
Sed0013784 Sechium edule HOM05D004704 ORTHO05D005384 7.9e-140 501.5 542 54.2
CARHR225390 Cardamine hirsuta HOM05D004704 ORTHO05D005384 1.7e-139 500.4 557 52.2
Aa31LG6G1280 Aethionema arabicum HOM05D004704 ORTHO05D005384 1.1e-138 497.7 558 51.3
Lj3g0017096 Lotus japonicus HOM05D004704 ORTHO05D005384 1.5e-138 497.3 550 53.1
Manes.17G053800 Manihot esculenta HOM05D004704 ORTHO05D005384 4.3e-138 495.7 543 52.9
BraA08t33364Z Brassica rapa HOM05D004704 ORTHO05D005384 9.6e-138 494.6 554 53.1
Phvul.005G096400 Phaseolus vulgaris HOM05D004704 ORTHO05D005384 2.1e-137 493.4 554 52.0
Glyma.12G209400 Glycine max HOM05D004704 ORTHO05D005384 4.8e-137 492.3 548 51.8
SGA_v2.0_scaffold1G00019 Striga asiatica HOM05D004704 ORTHO05D005384 3.1e-136 489.6 561 51.5
VMungo1080G1587 Vigna mungo HOM05D004704 ORTHO05D005384 1.2e-135 487.6 548 51.6
Glyma.13G291900 Glycine max HOM05D004704 ORTHO05D005384 2.0e-135 486.9 548 52.2
SGA_v2.0_scaffold1G00026 Striga asiatica HOM05D004704 ORTHO05D005384 4.5e-135 485.7 558 51.4
QL04p061454 Quercus lobata HOM05D004704 ORTHO05D005384 7.6e-135 485.0 517 56.1
A08p13850 Brassica napus HOM05D004704 ORTHO05D005384 1.3e-134 484.2 556 51.3
Aqoxy4G00468 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 4.9e-134 482.3 548 52.0
Thhalv10023013m.g Eutrema salsugineum HOM05D004704 ORTHO05D005384 4.2e-133 479.2 545 50.3
BcaNung03813 Brassica carinata HOM05D004704 ORTHO05D005384 5.5e-133 478.8 544 51.3
BcaC09g51492 Brassica carinata HOM05D004704 ORTHO05D005384 7.1e-133 478.4 558 50.9
A01p10560 Brassica napus HOM05D004704 ORTHO05D005384 9.3e-133 478.0 544 51.7
Lalb_Chr24g0400061 Lupinus albus HOM05D004704 ORTHO05D005384 2.7e-132 476.5 543 51.4
ATR0602G038 Amborella trichopoda HOM05D004704 ORTHO05D005384 3.5e-132 476.1 549 51.4
BcaB04g18480 Brassica carinata HOM05D004704 ORTHO05D005384 1.3e-131 474.2 551 50.8
Medtr2g091155 Medicago truncatula HOM05D004704 ORTHO05D005384 3.9e-131 472.6 545 50.3
Psat5g275720 Pisum sativum HOM05D004704 ORTHO05D005384 6.7e-131 471.9 544 49.8
BolC1t01223H Brassica oleracea HOM05D004704 ORTHO05D005384 3.3e-130 469.5 544 50.4
C01p12500 Brassica napus HOM05D004704 ORTHO05D005384 5.6e-130 468.8 544 51.1
unitig_578.g16444 Utricularia gibba HOM05D004704 ORTHO05D005384 9.6e-130 468.0 555 50.6
BraA01t01002Z Brassica rapa HOM05D004704 ORTHO05D005384 1.3e-129 467.6 544 51.3
BcaC09g51493 Brassica carinata HOM05D004704 ORTHO05D005384 2.4e-128 463.4 539 50.3
Medtr2g091165 Medicago truncatula HOM05D004704 ORTHO05D005384 6.5e-126 455.3 540 49.8
Lalb_Chr14g0367381 Lupinus albus HOM05D004704 ORTHO05D005384 1.4e-125 454.1 545 49.4
CSS0042208 Camellia sinensis var. sinensis HOM05D004704 ORTHO05D005384 3.5e-124 449.5 562 49.8
SGA_v2.0_scaffold1G00021 Striga asiatica HOM05D004704 ORTHO05D005384 3.5e-124 449.5 551 48.6
DCAR_013058 Daucus carota HOM05D004704 ORTHO05D005384 4.6e-124 449.1 539 50.5
TAR627G1005 Trochodendron aralioides HOM05D004704 ORTHO05D005384 1.5e-122 444.1 527 51.0
Aqoxy4G00469 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 5.7e-122 442.2 463 54.4
BcaC01g00546 Brassica carinata HOM05D004704 ORTHO05D005384 1.6e-121 440.7 555 49.2
MBI06_g45390_MAGBIO Magnolia biondii HOM05D004704 ORTHO05D005384 2.4e-120 436.8 391 61.6
Lalb_Chr20g0121271 Lupinus albus HOM05D004704 ORTHO05D005384 9.0e-120 434.9 455 53.0
C03p81280 Brassica napus HOM05D004704 ORTHO05D005384 1.1e-117 427.9 526 49.8
Ca_01465_v3 Cicer arietinum L. HOM05D004704 ORTHO05D005384 4.2e-117 426.0 524 50.0
Zm00001eb161990 Zea mays HOM05D004704 ORTHO05D005384 7.2e-117 425.2 559 47.0
AT4G18540 Arabidopsis thaliana HOM05D004704 ORTHO05D005384 2.1e-116 423.7 393 58.8
Os01g0613100 Oryza sativa ssp. japonica HOM05D004704 ORTHO05D005384 2.2e-110 403.7 578 43.1
Rhsim13G0186500 Rhododendron simsii HOM05D004704 ORTHO05D005384 1.9e-109 400.6 515 47.6
Sopen03g002240 Solanum pennellii HOM05D004704 ORTHO05D005384 2.7e-108 396.7 550 43.8
BcaNung03810 Brassica carinata HOM05D004704 ORTHO05D005384 7.4e-106 388.7 400 54.0
BolC3t20394H Brassica oleracea HOM05D004704 ORTHO05D005384 6.7e-99 365.5 377 53.6
CDE02G3156 Ceratophyllum demersum HOM05D004704 ORTHO05D005384 7.4e-98 362.1 515 42.9
PSO782G0854 Papaver somniferum HOM05D004704 ORTHO05D005384 1.7e-94 350.9 389 53.0
TPR.G11553 Trifolium pratense HOM05D004704 ORTHO05D005384 3.8e-94 349.7 545 41.7
Oeu041804.1 Olea europaea HOM05D004704 ORTHO05D005384 2.0e-90 337.4 331 55.9
Duzib235G1356 Durio zibethinus HOM05D004704 ORTHO05D005384 4.1e-88 329.7 311 60.5
SalBow8G4518 Salvia bowleyana HOM05D004704 ORTHO05D005384 2.8e-76 290.4 253 60.1
TAR627G0576 Trochodendron aralioides HOM05D004704 ORTHO05D005384 4.7e-76 289.7 277 59.6
Rhsim13G0105800 Rhododendron simsii HOM05D004704 ORTHO05D005384 3.0e-75 287.0 286 56.3
Pp3c12_12860 Physcomitrium patens HOM05D004704 ORTHO05D005384 1.2e-74 285.0 448 36.8
GSVIVG01021186001 Vitis vinifera HOM05D004704 ORTHO05D000303 5.7e-74 282.7 441 43.8
Solyc02g032600.1 Solanum lycopersicum HOM05D004704 ORTHO05D005384 2.4e-64 250.8 322 46.3
Sabra11G0046000 Salix brachista HOM05D004704 ORTHO05D005384 9.2e-64 248.8 202 65.3
Pp3c12_12910 Physcomitrium patens HOM05D004704 ORTHO05D005384 9.8e-58 228.8 312 40.4
Lj1C1195T2 Lonicera japonica HOM05D004704 ORTHO05D005384 2.2e-57 227.6 269 53.5
SalBow2G1262 Salvia bowleyana HOM05D004704 ORTHO05D005384 5.2e-51 206.5 172 67.4
Aqoxy1G03203 Aquilegia oxysepala HOM05D004704 ORTHO05D005384 4.6e-47 193.4 241 44.0
Sabra11G0045900 Salix brachista HOM05D004704 ORTHO05D005384 6.6e-46 189.5 190 53.2
SGA_v2.0_scaffold1G00016 Striga asiatica HOM05D004704 ORTHO05D005384 1.1e-43 182.2 119 70.6
TAR627G1161 Trochodendron aralioides HOM05D004704 ORTHO05D005384 1.9e-29 134.8 76 82.9
arahy.Tifrunner.gnm1.ann1.EBKJ9L Arachis hypogaea HOM05D004704 ORTHO05D005384 1.5e-26 125.2 85 70.6
SEGI_01061 Sequoiadendron giganteum HOM05D004704 ORTHO05D005384 3.8e-25 120.6 253 37.5
arahy.Tifrunner.gnm1.ann1.UG6603 Arachis hypogaea HOM05D004704 ORTHO05D005384 1.4e-24 118.6 77 74.0
COL.COLO4_31332 Corchorus olitorius HOM05D004704 ORTHO05D005384 7.4e-21 106.3 71 69.0
arahy.Tifrunner.gnm1.ann1.96JZXU Arachis hypogaea HOM05D004704 ORTHO05D005384 4.0e-19 100.5 61 75.4
arahy.Tifrunner.gnm1.ann1.E2ZA7R Arachis hypogaea HOM05D004704 ORTHO05D005384 3.4e-18 97.4 61 73.8
arahy.Tifrunner.gnm1.ann1.V1RFD3 Arachis hypogaea HOM05D004704 ORTHO05D005384 8.4e-17 92.8 61 70.5
SEGI_17553 Sequoiadendron giganteum HOM05D004704 ORTHO05D005384 9.3e-16 89.4 120 48.3
Rhsim06G0194600 Rhododendron simsii HOM05D000067 ORTHO05D005384 2.1e-12 78.2 66 54.5
arahy.Tifrunner.gnm1.ann1.ESA3XA Arachis hypogaea HOM05D004704 ORTHO05D005384 1.1e-11 75.9 51 72.5
Nitab4.5_0008860g0020 Nicotiana tabacum HOM05D004704 ORTHO05D005384 2.4e-11 74.7 79 53.2
Rhsim06G0194700 Rhododendron simsii HOM05D000067 ORTHO05D000097 2.6e-10 71.2 66 53.0
Nitab4.5_0003733g0050 Nicotiana tabacum HOM05D004704 ORTHO05D005384 3.5e-07 60.8 42 71.4
Nitab4.5_0008860g0010 Nicotiana tabacum HOM05D004704 ORTHO05D005384 2.3e-06 58.2 152 34.9


User provided reference genes

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