Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01020988001 Vitis vinifera HOM05D003998 ORTHO05D005144 2.6e-62 241.9 123 100.0
GSVIVG01020986001 Vitis vinifera HOM05D003998 ORTHO05D005144 1.9e-60 235.7 123 98.4
Atru.chr4.1608 Acer truncatum HOM05D003998 ORTHO05D005144 2.6e-38 162.2 123 69.1
Cfa014947 Carpinus fangiana HOM05D003998 ORTHO05D005144 1.4e-36 156.4 121 69.4
TAR362G0495 Trochodendron aralioides HOM05D003998 ORTHO05D005144 1.9e-36 156.0 123 66.7
QL06p026526 Quercus lobata HOM05D003998 ORTHO05D005144 4.2e-36 154.8 122 69.7
Haze_11635 Corylus avellana HOM05D003998 ORTHO05D005144 2.1e-35 152.5 121 67.8
Manes.15G055500 Manihot esculenta HOM05D003998 ORTHO05D005144 3.5e-35 151.8 123 67.5
Ciclev10004378m.g Citrus clementina HOM05D003998 ORTHO05D005144 6.0e-35 151.0 123 65.0
Sed0015957 Sechium edule HOM05D003998 ORTHO05D005144 6.0e-35 151.0 123 65.0
RcHm_v2.0_Chr4g0414141 Rosa chinensis HOM05D003998 ORTHO05D005144 1.1e-33 146.7 123 63.4
CiPaw.01G118500 Carya illinoinensis HOM05D003998 ORTHO05D005144 1.5e-33 146.4 123 65.0
Prupe.1G159900 Prunus persica HOM05D003998 ORTHO05D005144 1.5e-33 146.4 123 62.6
ClCG05G003230 Citrullus lanatus HOM05D003998 ORTHO05D005144 2.5e-33 145.6 123 63.4
Sabra16G0201000 Salix brachista HOM05D003998 ORTHO05D005144 3.3e-33 145.2 123 64.2
CsaV3_3G010860 Cucumis sativus L. HOM05D003998 ORTHO05D005144 5.6e-33 144.4 124 63.7
FvH4_4g13510 Fragaria vesca HOM05D003998 ORTHO05D005144 5.6e-33 144.4 123 61.8
TWI53G1682 Tripterygium wilfordii HOM05D003998 ORTHO05D005144 7.4e-33 144.1 123 64.2
FAN12G4114 Fragaria x ananassa HOM05D003998 ORTHO05D005144 1.3e-32 143.3 123 61.0
MD01G1010300 Malus domestica HOM05D003998 ORTHO05D005144 1.3e-32 143.3 123 63.4
MD04G1013700 Malus domestica HOM05D003998 ORTHO05D005144 1.3e-32 143.3 123 63.4
Potri.001G317700 Populus trichocarpa HOM05D003998 ORTHO05D005144 2.1e-32 142.5 123 63.4
Thecc.04G198600 Theobroma cacao HOM05D003998 ORTHO05D005144 2.8e-32 142.1 123 63.4
Duzib151G0324 Durio zibethinus HOM05D003998 ORTHO05D005144 3.7e-32 141.7 123 63.4
FAN22G0959 Fragaria x ananassa HOM05D003998 ORTHO05D005144 6.2e-32 141.0 123 60.2
Glyma.08G111100 Glycine max HOM05D003998 ORTHO05D005144 6.2e-32 141.0 123 61.0
Lalb_Chr12g0205551 Lupinus albus HOM05D003998 ORTHO05D005144 6.2e-32 141.0 123 63.4
Glyma.05G153400 Glycine max HOM05D003998 ORTHO05D005144 8.2e-32 140.6 123 61.0
COL.COLO4_20194 Corchorus olitorius HOM05D003998 ORTHO05D005144 1.1e-31 140.2 123 61.8
Actinidia35854 Actinidia chinensis HOM05D003998 ORTHO05D005144 2.4e-31 139.0 123 64.2
Ca_17974_v3 Cicer arietinum L. HOM05D003998 ORTHO05D005144 2.4e-31 139.0 123 59.3
Lj4g0023654 Lotus japonicus HOM05D003998 ORTHO05D005144 6.9e-31 137.5 123 60.2
Psat7g074560 Pisum sativum HOM05D003998 ORTHO05D005144 1.2e-30 136.7 123 58.5
arahy.Tifrunner.gnm1.ann1.7DTN51 Arachis hypogaea HOM05D003998 ORTHO05D005144 1.5e-30 136.3 123 60.2
arahy.Tifrunner.gnm1.ann1.DT4C3Q Arachis hypogaea HOM05D003998 ORTHO05D005144 1.5e-30 136.3 123 60.2
MELO3C006304.2 Cucumis melo HOM05D003998 ORTHO05D005144 2.6e-30 135.6 124 61.3
Lj6A454G39 Lonicera japonica HOM05D003998 ORTHO05D005144 2.6e-30 135.6 124 62.9
Lj6C491G2 Lonicera japonica HOM05D003998 ORTHO05D005144 2.6e-30 135.6 124 62.9
MBI11_g07440_MAGBIO Magnolia biondii HOM05D003998 ORTHO05D005144 2.6e-30 135.6 123 60.2
TPR.G11885 Trifolium pratense HOM05D003998 ORTHO05D005144 2.6e-30 135.6 119 60.5
CSS0005254 Camellia sinensis var. sinensis HOM05D003998 ORTHO05D005144 3.4e-30 135.2 123 61.8
Sc13g0000280 Simmondsia chinensis HOM05D003998 ORTHO05D005144 1.3e-29 133.3 123 56.9
Gohir.D11G007733 Gossypium hirsutum HOM05D003998 ORTHO05D005144 1.7e-29 132.9 123 60.2
Phvul.003G050000 Phaseolus vulgaris HOM05D003998 ORTHO05D005144 1.7e-29 132.9 123 56.9
Ah.13g078040 Amaranthus hybridus HOM05D003998 ORTHO05D005144 2.9e-29 132.1 119 57.1
DCAR_026634 Daucus carota HOM05D003998 ORTHO05D005144 2.9e-29 132.1 123 61.8
Eucgr.H02738 Eucalyptus grandis HOM05D003998 ORTHO05D005144 2.9e-29 132.1 123 59.3
Gohir.A02G020406 Gossypium hirsutum HOM05D003998 ORTHO05D005144 2.9e-29 132.1 123 60.2
EL10Ac3g07474 Beta vulgaris HOM05D003998 ORTHO05D005144 4.9e-29 131.3 123 56.1
Sopen09g035020 Solanum pennellii HOM05D003998 ORTHO05D005144 4.9e-29 131.3 108 62.0
Gohir.A01G175301 Gossypium hirsutum HOM05D003998 ORTHO05D005144 6.5e-29 131.0 123 59.3
Gohir.A03G104400 Gossypium hirsutum HOM05D003998 ORTHO05D005144 6.5e-29 131.0 123 59.3
Gohir.A10G130900 Gossypium hirsutum HOM05D003998 ORTHO05D005144 6.5e-29 131.0 123 59.3
Gohir.D02G024300 Gossypium hirsutum HOM05D003998 ORTHO05D005144 6.5e-29 131.0 123 59.3
CANSAT78G0640 Cannabis sativa HOM05D003998 ORTHO05D005144 8.4e-29 130.6 123 58.5
HanXRQChr15g0488261 Helianthus annuus HOM05D003998 ORTHO05D005144 1.9e-28 129.4 121 61.2
Solyc09g092140.3 Solanum lycopersicum HOM05D003998 ORTHO05D005144 1.9e-28 129.4 123 54.5
Dinv38203 Davidia involucrata HOM05D003998 ORTHO05D005144 2.5e-28 129.0 123 61.0
PGSC0003DMG400026420 Solanum tuberosum HOM05D003998 ORTHO05D005144 2.5e-28 129.0 123 54.5
PSO017G6005 Papaver somniferum HOM05D003998 ORTHO05D005144 3.2e-28 128.6 123 57.7
Gohir.A13G128800 Gossypium hirsutum HOM05D003998 ORTHO05D005144 4.2e-28 128.3 123 58.5
Gorai.005G030200 Gossypium raimondii HOM05D003998 ORTHO05D005144 4.2e-28 128.3 123 58.5
Nitab4.5_0000401g0150 Nicotiana tabacum HOM05D003998 ORTHO05D005144 7.1e-28 127.5 123 53.7
PGR083G0268 Punica granatum HOM05D003998 ORTHO05D005144 7.1e-28 127.5 119 54.6
AUR62018577 Chenopodium quinoa HOM05D003998 ORTHO05D005144 1.2e-27 126.7 123 53.7
AUR62020839 Chenopodium quinoa HOM05D003998 ORTHO05D005144 1.6e-27 126.3 123 56.1
MSTRG.21978 Avicennia marina HOM05D003998 ORTHO05D005144 2.1e-27 125.9 121 57.0
Nitab4.5_0004231g0010 Nicotiana tabacum HOM05D003998 ORTHO05D005144 2.1e-27 125.9 123 53.7
Medtr8g085220 Medicago truncatula HOM05D003998 ORTHO05D005144 2.7e-27 125.6 123 54.5
Peaxi162Scf00047g00340 Petunia axillaris HOM05D003998 ORTHO05D005144 2.7e-27 125.6 108 60.2
ECA232G0954 Erigeron canadensis HOM05D003998 ORTHO05D005144 3.5e-27 125.2 121 62.0
Rhsim09G0058600 Rhododendron simsii HOM05D003998 ORTHO05D005144 3.5e-27 125.2 121 57.9
CAN.G1648.3 Capsicum annuum HOM05D003998 ORTHO05D005144 6.0e-27 124.4 123 53.7
PSO063G6533 Papaver somniferum HOM05D003998 ORTHO05D005144 6.0e-27 124.4 123 56.1
Hund24398 Selenicereus undatus HOM05D003998 ORTHO05D005144 5.1e-26 121.3 123 55.3
vmacro00453 Vaccinium macrocarpon HOM05D003998 ORTHO05D005144 5.1e-26 121.3 121 57.0
ATR0605G199 Amborella trichopoda HOM05D003998 ORTHO05D005144 1.9e-25 119.4 121 52.9
Lsat_1_v5_gn_2_46500 Lactuca sativa HOM05D003998 ORTHO05D005144 1.9e-25 119.4 123 58.5
A05p13770 Brassica napus HOM05D003998 ORTHO05D005144 4.3e-25 118.2 125 56.0
BraA05t20313Z Brassica rapa HOM05D003998 ORTHO05D005144 4.3e-25 118.2 125 56.0
Carub.0004s1305 Capsella rubella HOM05D003998 ORTHO05D005144 5.7e-25 117.9 125 54.4
AT2G31740 Arabidopsis thaliana HOM05D003998 ORTHO05D005144 1.3e-24 116.7 125 54.4
BcaB02g10415 Brassica carinata HOM05D003998 ORTHO05D005144 1.3e-24 116.7 125 56.0
Cpa.g.sc83.25 Carica papaya HOM05D003998 ORTHO05D005144 1.3e-24 116.7 123 53.7
Aa31LG5G5250 Aethionema arabicum HOM05D003998 ORTHO05D005144 1.6e-24 116.3 125 53.6
AL4G27000 Arabidopsis lyrata HOM05D003998 ORTHO05D005144 1.6e-24 116.3 125 55.2
Sp4g14180 Schrenkiella parvula HOM05D003998 ORTHO05D005144 2.2e-24 115.9 125 54.4
THA.LOC104826185 Tarenaya hassleriana HOM05D003998 ORTHO05D005144 2.2e-24 115.9 124 52.4
SGA_v2.0_scaffold128G34122 Striga asiatica HOM05D003998 ORTHO05D005144 3.7e-24 115.2 121 52.9
BcaC02g11284 Brassica carinata HOM05D003998 ORTHO05D005144 4.8e-24 114.8 125 55.2
Cc03_g08110 Coffea canephora HOM05D003998 ORTHO05D005144 4.8e-24 114.8 95 61.1
SalBow3G3008 Salvia bowleyana HOM05D003998 ORTHO05D005144 8.2e-24 114.0 83 62.7
C04p18040 Brassica napus HOM05D003998 ORTHO05D005144 1.4e-23 113.2 125 54.4
BolC4t23351H Brassica oleracea HOM05D003998 ORTHO05D005144 1.4e-23 113.2 125 54.4
Thhalv10016302m.g Eutrema salsugineum HOM05D003998 ORTHO05D005144 1.4e-23 113.2 125 54.4
CARHR125430 Cardamine hirsuta HOM05D003998 ORTHO05D005144 2.4e-23 112.5 125 54.4
Migut.N00415 Erythranthe guttata HOM05D003998 ORTHO05D005144 1.0e-21 107.1 121 47.9
Aqoxy2G03902 Aquilegia oxysepala HOM05D003998 ORTHO05D005144 5.0e-21 104.8 123 51.2
Os04g0379300 Oryza sativa ssp. japonica HOM05D003998 ORTHO05D005144 1.4e-20 103.2 96 52.1
FAN07G2317 Fragaria x ananassa HOM05D003998 ORTHO05D005144 1.4e-18 96.7 123 47.2
Oeu025025.1 Olea europaea HOM05D003998 ORTHO05D005144 3.9e-18 95.1 143 44.1
unitig_22.g6826 Utricularia gibba HOM05D003998 ORTHO05D005144 8.8e-18 94.0 100 53.0
Zm00001eb420660 Zea mays HOM05D003998 ORTHO05D005144 2.8e-16 89.0 91 49.5
Migut.I00432 Erythranthe guttata HOM05D003998 ORTHO05D005144 4.8e-16 88.2 92 52.2
SEGI_34578 Sequoiadendron giganteum HOM05D003998 ORTHO05D005144 6.3e-16 87.8 91 47.3
Migut.N00888 Erythranthe guttata HOM05D003998 ORTHO05D005144 2.6e-14 82.4 93 50.5
Migut.I00433 Erythranthe guttata HOM05D003998 ORTHO05D005144 1.0e-13 80.5 87 44.8
Migut.I00213 Erythranthe guttata HOM05D003998 ORTHO05D005144 2.9e-13 79.0 92 46.7
Migut.N00410 Erythranthe guttata HOM05D003998 ORTHO05D005144 2.9e-13 79.0 91 45.1
Migut.N00409 Erythranthe guttata HOM05D003998 ORTHO05D005144 5.0e-13 78.2 95 44.2
Migut.N00785 Erythranthe guttata HOM05D003998 ORTHO05D005144 1.1e-12 77.0 87 46.0
Migut.I00431 Erythranthe guttata HOM05D003998 ORTHO05D005144 1.9e-12 76.3 92 47.8
Migut.N00412 Erythranthe guttata HOM05D003998 ORTHO05D005144 1.9e-12 76.3 98 39.8
Migut.F01776 Erythranthe guttata HOM05D003998 ORTHO05D005144 7.2e-12 74.3 80 45.0
Atru.chr3.3435 Acer truncatum HOM05D000005 ORTHO05D000012 9.4e-12 73.9 49 77.6
Migut.N00411 Erythranthe guttata HOM05D003998 ORTHO05D005144 2.1e-11 72.8 95 41.1
VMungo0251G3649 Vigna mungo HOM05D003998 ORTHO05D005144 1.0e-10 70.5 47 72.3
Migut.H01109 Erythranthe guttata HOM05D003998 ORTHO05D005144 3.9e-10 68.6 98 41.8
Migut.N00408 Erythranthe guttata HOM05D003998 ORTHO05D005144 3.9e-10 68.6 97 39.2
Pp3c8_4600 Physcomitrium patens HOM05D003998 ORTHO05D005144 1.1e-09 67.0 94 38.3
Migut.N00414 Erythranthe guttata HOM05D003998 ORTHO05D005144 9.7e-09 63.9 96 37.5
SHI00910 Sapria himalayana HOM05D003998 ORTHO05D005144 9.7e-09 63.9 46 60.9
Migut.F01720 Erythranthe guttata HOM05D003998 ORTHO05D005144 1.3e-08 63.5 82 39.0
AagrBONN_evm.TU.Sc2ySwM_117.2891 Anthoceros agrestis HOM05D003998 ORTHO05D005144 3.7e-08 62.0 92 35.9
Pp3c17_2650 Physcomitrium patens HOM05D003998 ORTHO05D005144 1.1e-07 60.5 124 31.5
Migut.I00434 Erythranthe guttata HOM05D003998 ORTHO05D005144 1.4e-07 60.1 102 34.3
BcaB05g24360 Brassica carinata HOM05D003998 ORTHO05D005144 4.1e-07 58.5 48 60.4
Mapoly0151s0004 Marchantia polymorpha HOM05D003998 ORTHO05D005144 5.3e-07 58.2 69 34.8
Migut.C00311 Erythranthe guttata HOM05D003998 ORTHO05D005144 1.2e-06 57.0 95 40.0
CBR_g32089 Chara braunii HOM05D003998 ORTHO05D005144 1.5e-06 56.6 73 41.1
Migut.O00105 Erythranthe guttata HOM05D003998 ORTHO05D005144 3.4e-06 55.5 95 38.9


User provided reference genes

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