Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01020677001 Vitis vinifera HOM05D004473 ORTHO05D005652 6.9e-29 129.8 59 100.0
GSVIVG01022885001 Vitis vinifera HOM05D004473 ORTHO05D005652 1.2e-20 102.4 46 97.8
TPR.G10220 Trifolium pratense HOM05D004473 ORTHO05D005652 8.8e-16 86.3 46 76.1
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 1.1e-15 85.9 46 78.3
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 1.1e-15 85.9 46 78.3
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 1.5e-15 85.5 46 80.4
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 1.5e-15 85.5 46 78.3
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 2.5e-15 84.7 46 78.3
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.5e-15 84.7 46 78.3
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.5e-15 84.7 46 78.3
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 1.3e-14 82.4 46 76.1
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.7e-14 82.0 46 73.9
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 2.8e-14 81.3 51 68.6
BolC2t10578H Brassica oleracea HOM05D004473 ORTHO05D005652 2.8e-14 81.3 51 68.6
BolSC37t60777H Brassica oleracea HOM05D004473 ORTHO05D005652 2.8e-14 81.3 51 68.6
BolSC45t60885H Brassica oleracea HOM05D004473 ORTHO05D005652 2.8e-14 81.3 51 68.6
BolSC45t60929H Brassica oleracea HOM05D004473 ORTHO05D005652 2.8e-14 81.3 51 68.6
BolSC46t60978H Brassica oleracea HOM05D004473 ORTHO05D005652 2.8e-14 81.3 51 68.6
BolSC49t61206H Brassica oleracea HOM05D004473 ORTHO05D005652 2.8e-14 81.3 51 68.6
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 2.8e-14 81.3 51 68.6
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 3.7e-14 80.9 46 71.7
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 4.8e-14 80.5 47 72.3
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 4.8e-14 80.5 47 72.3
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 6.3e-14 80.1 46 73.9
BraSC25t45889Z Brassica rapa HOM05D004473 ORTHO05D005652 6.3e-14 80.1 46 73.9
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 6.3e-14 80.1 48 72.9
Lj2P1238T61 Lonicera japonica HOM05D004473 ORTHO05D005652 6.3e-14 80.1 46 73.9
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 6.3e-14 80.1 46 73.9
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 1.1e-13 79.3 46 71.7
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 1.4e-13 79.0 53 64.2
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 2.4e-13 78.2 46 71.7
Gorai.003G179600 Gossypium raimondii HOM05D004473 ORTHO05D005652 2.4e-13 78.2 43 76.7
Nitab4.5_0011099g0050 Nicotiana tabacum HOM05D004473 ORTHO05D005652 2.4e-13 78.2 51 66.7
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 3.1e-13 77.8 46 71.7
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 4.1e-13 77.4 46 76.1
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 5.3e-13 77.0 56 60.7
Lsat_1_v5_gn_7_76981 Lactuca sativa HOM05D004473 ORTHO05D005652 5.3e-13 77.0 46 73.9
Peaxi162Scf00211g00223 Petunia axillaris HOM05D004473 ORTHO05D005652 6.9e-13 76.6 46 71.7
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 6.9e-13 76.6 46 71.7
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 6.9e-13 76.6 46 71.7
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 6.9e-13 76.6 46 71.7
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 6.9e-13 76.6 46 71.7
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 6.9e-13 76.6 46 71.7
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 6.9e-13 76.6 46 71.7
PGSC0003DMG400041047 Solanum tuberosum HOM05D004473 ORTHO05D005652 6.9e-13 76.6 46 71.7
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 9.1e-13 76.3 46 67.4
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 9.1e-13 76.3 46 73.9
Gorai.002G165800 Gossypium raimondii HOM05D001387 ORTHO05D001250 1.2e-12 75.9 53 56.6
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.5e-12 75.5 46 69.6
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.5e-12 75.5 46 69.6
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.5e-12 75.5 46 69.6
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.5e-12 75.5 46 69.6
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.5e-12 75.5 46 69.6
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.5e-12 75.5 46 69.6
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.5e-12 75.5 46 69.6
HanXRQChr00c0126g0571831 Helianthus annuus HOM05D004473 ORTHO05D005652 2.0e-12 75.1 46 69.6
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 2.0e-12 75.1 46 69.6
HanXRQChr00c0572g0575931 Helianthus annuus HOM05D004473 ORTHO05D005652 2.0e-12 75.1 46 69.6
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 2.0e-12 75.1 46 69.6
CAN.G219.14 Capsicum annuum HOM05D004473 ORTHO05D005652 3.4e-12 74.3 53 62.3
CAN.G575.33 Capsicum annuum HOM05D004473 ORTHO05D000001 3.4e-12 74.3 53 62.3
CAN.G85.6 Capsicum annuum HOM05D004473 ORTHO05D005652 3.4e-12 74.3 53 62.3
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 3.4e-12 74.3 53 62.3
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 3.4e-12 74.3 45 73.3
CAN.G100.39 Capsicum annuum HOM05D004473 ORTHO05D005652 4.5e-12 73.9 45 68.9
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 4.5e-12 73.9 46 65.2
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 4.5e-12 73.9 46 65.2
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.9e-12 73.6 46 67.4
Gohir.A08G095662 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.0e-11 72.8 46 67.4
Hund25918 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.0e-11 72.8 46 65.2
CAN.G1738.12 Capsicum annuum HOM05D004473 ORTHO05D005652 1.3e-11 72.4 53 60.4
Migut.D01408 Erythranthe guttata HOM05D004473 ORTHO05D005652 2.9e-11 71.2 46 67.4
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 2.9e-11 71.2 46 67.4
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 5.0e-11 70.5 46 69.6
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 6.5e-11 70.1 46 67.4
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 6.5e-11 70.1 46 67.4
CAN.G130.4 Capsicum annuum HOM05D004473 ORTHO05D005652 6.5e-11 70.1 47 63.8
MELO3C027413.2 Cucumis melo HOM05D004473 ORTHO05D005652 8.5e-11 69.7 47 63.8
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 1.4e-10 68.9 46 69.6
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 3.2e-10 67.8 35 82.9
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 5.5e-10 67.0 35 80.0
arahy.Tifrunner.gnm1.ann1.85ZYV6 Arachis hypogaea HOM05D004473 ORTHO05D005652 1.6e-09 65.5 55 56.4
Hund10684 Selenicereus undatus HOM05D004473 ORTHO05D005652 6.1e-09 63.5 46 63.0
CAN.G156.6 Capsicum annuum HOM05D004473 ORTHO05D005652 1.0e-08 62.8 47 59.6
Oeu020582.1 Olea europaea HOM05D004473 ORTHO05D005652 8.8e-08 59.7 45 64.4
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 7.4e-07 56.6 34 70.6
Eucgr.D00924 Eucalyptus grandis HOM05D004473 ORTHO05D005652 2.2e-06 55.1 36 69.4
Thhalv10028154m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 2.8e-06 54.7 42 57.1
Lsat_1_v5_gn_2_89740 Lactuca sativa HOM05D004473 ORTHO05D005652 2.8e-06 54.7 38 63.2
Thhalv10001851m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 6.3e-06 53.5 36 63.9
Thhalv10012215m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 6.3e-06 53.5 36 63.9


User provided reference genes

Program Settings