Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01020676001 Vitis vinifera HOM05D004537 ORTHO05D005492 2.4e-81 305.4 153 100.0
Dinv06725 Davidia involucrata HOM05D004537 ORTHO05D005492 9.2e-33 144.1 129 62.8
Hma1.2p1_0136F.1_g062006 Hydrangea macrophylla HOM05D004537 ORTHO05D005492 4.6e-32 141.7 129 62.0
Actinidia34915 Actinidia chinensis HOM05D004537 ORTHO05D005492 1.3e-31 140.2 129 62.0
CAN.G999.40 Capsicum annuum HOM05D004537 ORTHO05D005492 1.3e-31 140.2 81 85.2
arahy.Tifrunner.gnm1.ann1.FSQ0ED Arachis hypogaea HOM05D004537 ORTHO05D005492 2.3e-31 139.4 129 61.2
arahy.Tifrunner.gnm1.ann1.JYE7Y9 Arachis hypogaea HOM05D004537 ORTHO05D005492 2.3e-31 139.4 129 61.2
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 2.3e-31 139.4 129 61.2
Ca_30901_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 2.3e-31 139.4 129 61.2
LjContig00315g0003687 Lotus japonicus HOM05D004537 ORTHO05D005492 2.3e-31 139.4 129 61.2
Aqoxy12s002 Aquilegia oxysepala HOM05D004537 ORTHO05D005492 1.9e-30 136.3 129 61.2
arahy.Tifrunner.gnm1.ann1.QL9R2N Arachis hypogaea HOM05D004537 ORTHO05D005492 1.9e-30 136.3 129 60.5
CAN.G1109.10 Capsicum annuum HOM05D004537 ORTHO05D005492 3.3e-30 135.6 129 60.5
CAN.G1167.11 Capsicum annuum HOM05D004537 ORTHO05D005492 3.3e-30 135.6 129 60.5
CAN.G78.1 Capsicum annuum HOM05D004537 ORTHO05D005492 3.3e-30 135.6 129 60.5
Cpa.g.sc263.4 Carica papaya HOM05D004537 ORTHO05D005492 3.3e-30 135.6 129 60.5
DCAR_032457 Daucus carota HOM05D004537 ORTHO05D005492 3.3e-30 135.6 129 60.5
Gorai.001G162500 Gossypium raimondii HOM05D004537 ORTHO05D005492 3.3e-30 135.6 129 60.5
QL10p061777 Quercus lobata HOM05D004537 ORTHO05D005492 3.3e-30 135.6 129 60.5
Sed0020696 Sechium edule HOM05D004537 ORTHO05D005492 3.3e-30 135.6 129 60.5
Solyc00g500186.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 3.3e-30 135.6 129 60.5
Solyc00g500250.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 3.3e-30 135.6 129 60.5
Solyc00g500349.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 3.3e-30 135.6 129 60.5
Sopen05g012670 Solanum pennellii HOM05D004537 ORTHO05D005492 3.3e-30 135.6 129 60.5
PGSC0003DMG400002971 Solanum tuberosum HOM05D004537 ORTHO05D005492 3.3e-30 135.6 129 60.5
HanXRQChr10g0310851 Helianthus annuus HOM05D004537 ORTHO05D005492 4.3e-30 135.2 129 60.5
HanXRQChr14g0433461 Helianthus annuus HOM05D004537 ORTHO05D005492 4.3e-30 135.2 129 60.5
HanXRQMTg0579341 Helianthus annuus HOM05D004537 ORTHO05D005492 4.3e-30 135.2 129 60.5
Sed0009736 Sechium edule HOM05D004537 ORTHO05D005492 1.2e-29 133.7 97 75.3
arahy.Tifrunner.gnm1.ann1.19WC2D Arachis hypogaea HOM05D004537 ORTHO05D005492 6.2e-29 131.3 105 67.6
Gorai.013G213100 Gossypium raimondii HOM05D004537 ORTHO05D005492 8.0e-29 131.0 128 59.4
Nitab4.5_0001761g0020 Nicotiana tabacum HOM05D004537 ORTHO05D005492 8.0e-29 131.0 129 57.4
Ah.00g237940 Amaranthus hybridus HOM05D004537 ORTHO05D005492 2.3e-28 129.4 129 58.9
ATMG01360 Arabidopsis thaliana HOM05D004537 ORTHO05D005492 2.3e-28 129.4 129 58.9
A04p09350 Brassica napus HOM05D004537 ORTHO05D005492 2.3e-28 129.4 129 58.9
BolSC28t60311H Brassica oleracea HOM05D004537 ORTHO05D005492 2.3e-28 129.4 129 58.9
BolSC28t60367H Brassica oleracea HOM05D004537 ORTHO05D005492 2.3e-28 129.4 129 58.9
BraSC159t45726Z Brassica rapa HOM05D004537 ORTHO05D005492 2.3e-28 129.4 129 58.9
BraSC48t46236Z Brassica rapa HOM05D004537 ORTHO05D005492 2.3e-28 129.4 129 58.9
CANSAT16G0002 Cannabis sativa HOM05D004537 ORTHO05D005492 2.3e-28 129.4 129 58.9
CARHR283530 Cardamine hirsuta HOM05D004537 ORTHO05D005492 2.3e-28 129.4 129 58.9
Nn1g10090 Nelumbo nucifera HOM05D004537 ORTHO05D005492 2.3e-28 129.4 129 58.9
RcHm_v2.0_Chr6g0256731 Rosa chinensis HOM05D004537 ORTHO05D005492 2.3e-28 129.4 129 58.9
SabraMtG0005600 Salix brachista HOM05D004537 ORTHO05D005492 2.3e-28 129.4 129 58.9
Sp3g25790 Schrenkiella parvula HOM05D004537 ORTHO05D005492 2.3e-28 129.4 129 58.9
Sc08g0004810 Simmondsia chinensis HOM05D004537 ORTHO05D005492 2.3e-28 129.4 129 58.9
Nitab4.5_0000866g0210 Nicotiana tabacum HOM05D004537 ORTHO05D005492 6.8e-28 127.9 93 74.2
HanXRQChr04g0127251 Helianthus annuus HOM05D004537 ORTHO05D005492 3.4e-27 125.6 130 58.5
Solyc11g063610.3 Solanum lycopersicum HOM05D004537 ORTHO05D005492 3.4e-27 125.6 129 57.4
ClCG04G003500 Citrullus lanatus HOM05D004537 ORTHO05D005492 1.3e-26 123.6 131 56.5
Solyc07g019510.4 Solanum lycopersicum HOM05D004537 ORTHO05D005492 1.9e-25 119.8 126 55.6
Nitab4.5_0001127g0230 Nicotiana tabacum HOM05D004537 ORTHO05D005492 4.1e-25 118.6 129 54.3
SEGI_28485 Sequoiadendron giganteum HOM05D004537 ORTHO05D005492 9.2e-25 117.5 129 55.0
Sed0024638 Sechium edule HOM05D004537 ORTHO05D005492 1.6e-24 116.7 100 68.0
QL04p031979 Quercus lobata HOM05D004537 ORTHO05D005492 4.6e-24 115.2 129 54.3
CAN.G60.10 Capsicum annuum HOM05D004537 ORTHO05D005492 1.3e-23 113.6 93 64.5
Migut.E00896 Erythranthe guttata HOM05D004537 ORTHO05D005492 8.1e-21 104.4 94 62.8
Migut.E01634 Erythranthe guttata HOM05D004537 ORTHO05D005492 1.1e-20 104.0 94 61.7
SHI26645 Sapria himalayana HOM05D004537 ORTHO05D005492 1.2e-19 100.5 57 87.7
Lalb_Chr00c21g0405801 Lupinus albus HOM05D004537 ORTHO05D005492 3.4e-19 99.0 117 53.0
Haze_27145 Corylus avellana HOM05D004537 ORTHO05D005492 5.8e-19 98.2 103 53.4
Gohir.D04G096416 Gossypium hirsutum HOM05D004537 ORTHO05D005492 5.8e-19 98.2 143 46.9
Ah.01g011750 Amaranthus hybridus HOM05D004537 ORTHO05D005492 1.3e-18 97.1 69 73.9
HanXRQChr04g0127221 Helianthus annuus HOM05D004537 ORTHO05D005492 1.7e-18 96.7 114 54.4
Lalb_Chr11g0071071 Lupinus albus HOM05D004537 ORTHO05D005492 6.4e-18 94.7 57 80.7
AUR62026821 Chenopodium quinoa HOM05D004537 ORTHO05D005492 2.4e-17 92.8 49 91.8
AUR62042353 Chenopodium quinoa HOM05D004537 ORTHO05D005492 2.4e-17 92.8 49 91.8
RhsimMtG0000400 Rhododendron simsii HOM05D004537 ORTHO05D005492 2.4e-17 92.8 49 91.8
Nitab4.5_0000592g0100 Nicotiana tabacum HOM05D004537 ORTHO05D005492 4.1e-17 92.0 70 72.9
SHI35293 Sapria himalayana HOM05D004537 ORTHO05D005492 5.4e-17 91.7 59 78.0
LjContig00315g0010412 Lotus japonicus HOM05D004537 ORTHO05D005492 7.8e-16 87.8 54 81.5
Pp3c4_28940 Physcomitrium patens HOM05D004537 ORTHO05D005492 7.8e-16 87.8 49 85.7
Pp3c4_28946 Physcomitrium patens HOM05D004537 ORTHO05D005492 7.8e-16 87.8 49 85.7
CDE02G4726 Ceratophyllum demersum HOM05D004537 ORTHO05D005492 1.0e-15 87.4 57 80.7
Medtr8g106255 Medicago truncatula HOM05D004537 ORTHO05D005492 1.3e-15 87.0 54 81.5
SHI26666 Sapria himalayana HOM05D004537 ORTHO05D005492 3.6e-13 79.0 54 74.1
SHI27476 Sapria himalayana HOM05D004537 ORTHO05D005492 1.4e-12 77.0 48 79.2
MELO3C021523.2 Cucumis melo HOM05D004537 ORTHO05D005492 1.5e-11 73.6 44 81.8
Mapoly0006s0021 Marchantia polymorpha HOM05D004537 ORTHO05D005492 2.6e-11 72.8 41 85.4
SHI26667 Sapria himalayana HOM05D004537 ORTHO05D005492 5.8e-11 71.6 58 69.0
Solyc02g021770.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 2.9e-10 69.3 36 94.4
unitig_87.g28001 Utricularia gibba HOM05D004537 ORTHO05D005492 2.9e-10 69.3 36 94.4
CAN.G61.11 Capsicum annuum HOM05D004537 ORTHO05D005492 6.4e-10 68.2 94 44.7
SHI20134 Sapria himalayana HOM05D004537 ORTHO05D005492 6.4e-10 68.2 40 77.5
SMO053G0009 Selaginella moellendorffii HOM05D004537 ORTHO05D005492 1.1e-09 67.4 136 38.2
Solyc08g029280.2 Solanum lycopersicum HOM05D004537 ORTHO05D005492 1.9e-09 66.6 89 48.3
MD13G1127000 Malus domestica HOM05D004537 ORTHO05D005492 3.2e-09 65.9 96 45.8
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 9.2e-09 64.3 85 50.6
Glyma.03G094400 Glycine max HOM05D004537 ORTHO05D005492 1.6e-08 63.5 44 75.0
RcHm_v2.0_MTg0498791 Rosa chinensis HOM05D004537 ORTHO05D005492 2.1e-08 63.2 36 88.9
ClCG09G001530 Citrullus lanatus HOM05D004537 ORTHO05D005492 2.7e-08 62.8 33 87.9
PSO384G3370 Papaver somniferum HOM05D004537 ORTHO05D005492 3.5e-08 62.4 67 58.2
SHI20133 Sapria himalayana HOM05D004537 ORTHO05D005492 7.8e-08 61.2 39 74.4
Ah.14g079610 Amaranthus hybridus HOM05D004537 ORTHO05D005492 1.3e-07 60.5 30 93.3
Psat0s12108g0080 Pisum sativum HOM05D004537 ORTHO05D005492 1.3e-07 60.5 30 93.3
unitig_87.g28000 Utricularia gibba HOM05D004537 ORTHO05D005492 1.3e-07 60.5 30 93.3
HanXRQChr08g0236111 Helianthus annuus HOM05D004537 ORTHO05D005492 1.7e-07 60.1 30 93.3
SHI27477 Sapria himalayana HOM05D004537 ORTHO05D005492 3.0e-07 59.3 52 55.8
Nitab4.5_0000019g0180 Nicotiana tabacum HOM05D004537 ORTHO05D005492 5.1e-07 58.5 53 64.2
CAN.G505.7 Capsicum annuum HOM05D004537 ORTHO05D005492 8.6e-07 57.8 35 80.0


User provided reference genes

Program Settings