Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01020541001 Vitis vinifera HOM05D005953 ORTHO05D004056 2.8e-33 144.8 79 100.0
Nn1g06570 Nelumbo nucifera HOM05D005953 ORTHO05D004056 3.3e-18 94.7 82 68.3
Atru.chr6.2998 Acer truncatum HOM05D005953 ORTHO05D004056 2.1e-17 92.0 80 72.5
Ciclev10017361m.g Citrus clementina HOM05D005953 ORTHO05D004056 2.1e-17 92.0 79 67.1
MELO3C013618.2 Cucumis melo HOM05D005953 ORTHO05D004056 1.1e-16 89.7 80 68.8
MBI07_g12792_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 1.4e-16 89.4 82 64.6
Thecc.02G179300 Theobroma cacao HOM05D005953 ORTHO05D004056 1.4e-16 89.4 82 65.9
Sed0013976 Sechium edule HOM05D005953 ORTHO05D004056 9.0e-16 86.7 79 65.8
Hma1.2p1_1201F.1_g266560 Hydrangea macrophylla HOM05D005953 ORTHO05D004056 2.6e-15 85.1 80 65.0
TAR626G0584 Trochodendron aralioides HOM05D005953 ORTHO05D004056 3.4e-15 84.7 79 67.1
Gohir.A04G103800 Gossypium hirsutum HOM05D005953 ORTHO05D004056 3.8e-14 81.3 79 62.0
Manes.12G089522 Manihot esculenta HOM05D005953 ORTHO05D004056 4.9e-14 80.9 81 63.0
Gohir.D04G143500 Gossypium hirsutum HOM05D005953 ORTHO05D004056 6.4e-14 80.5 79 62.0
Gorai.012G128900 Gossypium raimondii HOM05D005953 ORTHO05D004056 6.4e-14 80.5 79 62.0
ClCG07G002930 Citrullus lanatus HOM05D005953 ORTHO05D004056 1.1e-13 79.7 83 62.7
QL02p049480 Quercus lobata HOM05D005953 ORTHO05D004056 1.9e-13 79.0 78 66.7
QL08p038675 Quercus lobata HOM05D005953 ORTHO05D004056 1.9e-13 79.0 78 66.7
CsaV3_7G004410 Cucumis sativus L. HOM05D005953 ORTHO05D004056 3.2e-13 78.2 82 61.0
ClCG02G017620 Citrullus lanatus HOM05D005953 ORTHO05D004056 5.4e-13 77.4 80 62.5
MELO3C018738.2 Cucumis melo HOM05D005953 ORTHO05D004056 1.2e-12 76.3 83 60.2
Migut.H01186 Erythranthe guttata HOM05D005953 ORTHO05D004056 1.2e-12 76.3 79 64.6
PGR042G2028 Punica granatum HOM05D005953 ORTHO05D004056 4.6e-12 74.3 90 55.6
SalBow1G2785 Salvia bowleyana HOM05D005953 ORTHO05D004056 6.0e-12 73.9 79 63.3
MBI06_g06482_MAGBIO Magnolia biondii HOM05D005953 ORTHO05D004056 1.3e-11 72.8 82 61.0
Nn1g04077 Nelumbo nucifera HOM05D005953 ORTHO05D004056 1.3e-11 72.8 84 53.6
Actinidia09855 Actinidia chinensis HOM05D005953 ORTHO05D004056 6.7e-11 70.5 79 59.5
HanXRQChr17g0541941 Helianthus annuus HOM05D005953 ORTHO05D004056 6.7e-11 70.5 80 53.8
Potri.019G100601 Populus trichocarpa HOM05D005953 ORTHO05D004056 6.7e-11 70.5 79 59.5
Medtr2g090340 Medicago truncatula HOM05D005953 ORTHO05D004056 8.7e-11 70.1 79 62.0
Manes.13G147000 Manihot esculenta HOM05D005953 ORTHO05D004056 1.9e-10 68.9 82 54.9
arahy.Tifrunner.gnm1.ann1.XD6XV6 Arachis hypogaea HOM05D005953 ORTHO05D004056 2.5e-10 68.6 79 53.2
arahy.Tifrunner.gnm1.ann1.RLZ54R Arachis hypogaea HOM05D005953 ORTHO05D004056 5.6e-10 67.4 79 53.2
Eucgr.A01816 Eucalyptus grandis HOM05D005953 ORTHO05D004056 9.6e-10 66.6 80 53.8
Dinv23644 Davidia involucrata HOM05D005953 ORTHO05D004056 1.3e-09 66.2 80 56.2
Nitab4.5_0002253g0010 Nicotiana tabacum HOM05D005953 ORTHO05D004056 1.6e-09 65.9 81 53.1
Oeu045817.1 Olea europaea HOM05D005953 ORTHO05D004056 1.6e-09 65.9 82 54.9
Sabra13G0111400 Salix brachista HOM05D005953 ORTHO05D004056 2.8e-09 65.1 78 56.4
Ca_01501_v3 Cicer arietinum L. HOM05D005953 ORTHO05D004056 3.7e-09 64.7 79 55.7
CDE08G1618 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 4.8e-09 64.3 81 56.8
Carub.0007s1247 Capsella rubella HOM05D005953 ORTHO05D004056 1.4e-08 62.8 85 51.8
Sopen07g028000 Solanum pennellii HOM05D005953 ORTHO05D004056 3.1e-08 61.6 80 51.2
Potri.019G111501 Populus trichocarpa HOM05D005953 ORTHO05D004056 4.0e-08 61.2 83 55.4
Solyc07g054060.3 Solanum lycopersicum HOM05D005953 ORTHO05D004056 4.0e-08 61.2 80 51.2
Actinidia11037 Actinidia chinensis HOM05D005953 ORTHO05D004056 5.3e-08 60.8 82 58.5
PSO675G7471 Papaver somniferum HOM05D005953 ORTHO05D004056 5.3e-08 60.8 81 46.9
Aqoxy1G02469 Aquilegia oxysepala HOM05D005953 ORTHO05D004056 6.9e-08 60.5 85 50.6
DCAR_013006 Daucus carota HOM05D005953 ORTHO05D004056 6.9e-08 60.5 98 51.0
ECA246G2973 Erigeron canadensis HOM05D005953 ORTHO05D004056 9.0e-08 60.1 83 48.2
Peaxi162Scf00206g01011 Petunia axillaris HOM05D005953 ORTHO05D004056 9.0e-08 60.1 82 51.2
TAR627G0894 Trochodendron aralioides HOM05D005953 ORTHO05D004056 9.0e-08 60.1 50 62.0
Glyma.12G112600 Glycine max HOM05D005953 ORTHO05D004056 1.2e-07 59.7 79 53.2
BolC1t02424H Brassica oleracea HOM05D005953 ORTHO05D004056 1.5e-07 59.3 85 49.4
Peaxi162Scf00132g00229 Petunia axillaris HOM05D005953 ORTHO05D004056 2.0e-07 58.9 80 50.0
Sed0015284 Sechium edule HOM05D005953 ORTHO05D004056 2.6e-07 58.5 81 54.3
MD17G1240800 Malus domestica HOM05D005953 ORTHO05D004056 3.4e-07 58.2 80 48.8
ATR0776G010 Amborella trichopoda HOM05D045262 ORTHO05D004056 4.5e-07 57.8 98 42.9
Lsat_1_v5_gn_8_134201 Lactuca sativa HOM05D005953 ORTHO05D004056 4.5e-07 57.8 81 48.1
Lalb_Chr03g0029431 Lupinus albus HOM05D005953 ORTHO05D004056 4.5e-07 57.8 79 50.6
Lalb_Chr14g0366901 Lupinus albus HOM05D005953 ORTHO05D004056 4.5e-07 57.8 81 49.4
Oeu002560.3 Olea europaea HOM05D005953 ORTHO05D004056 4.5e-07 57.8 83 49.4
C01p24770 Brassica napus HOM05D005953 ORTHO05D004056 5.8e-07 57.4 85 48.2
CSS0043101 Camellia sinensis var. sinensis HOM05D005953 ORTHO05D004056 7.6e-07 57.0 46 67.4
Cfa014612 Carpinus fangiana HOM05D005953 ORTHO05D004056 7.6e-07 57.0 79 50.6
arahy.Tifrunner.gnm1.ann1.P9B1J4 Arachis hypogaea HOM05D005953 ORTHO05D004056 9.9e-07 56.6 79 49.4
Prupe.3G137400 Prunus persica HOM05D005953 ORTHO05D004056 9.9e-07 56.6 85 47.1
Sp7g26250 Schrenkiella parvula HOM05D005953 ORTHO05D004056 9.9e-07 56.6 79 49.4
PGSC0003DMG400018306 Solanum tuberosum HOM05D005953 ORTHO05D004056 9.9e-07 56.6 80 50.0
Nitab4.5_0000512g0060 Nicotiana tabacum HOM05D005953 ORTHO05D004056 1.3e-06 56.2 80 48.8
Phvul.011G114200 Phaseolus vulgaris HOM05D005953 ORTHO05D004056 1.3e-06 56.2 80 50.0
BcaB03g12563 Brassica carinata HOM05D005953 ORTHO05D004056 1.7e-06 55.8 85 44.7
BcaB03g12564 Brassica carinata HOM05D005953 ORTHO05D004056 1.7e-06 55.8 85 44.7
Nitab4.5_0002169g0120 Nicotiana tabacum HOM05D005953 ORTHO05D004056 1.7e-06 55.8 80 48.8
CSS0034597 Camellia sinensis var. sinensis HOM05D005953 ORTHO05D004056 2.2e-06 55.5 46 67.4
CDE02G2683 Ceratophyllum demersum HOM05D005953 ORTHO05D004056 2.2e-06 55.5 80 50.0
Gohir.A12G241800 Gossypium hirsutum HOM05D008304 ORTHO05D004056 2.2e-06 55.5 81 45.7
MBI12_g20132_MAGBIO Magnolia biondii HOM05D008304 ORTHO05D004056 2.2e-06 55.5 83 48.2
CiPaw.11G110100 Carya illinoinensis HOM05D008304 ORTHO05D004056 2.9e-06 55.1 85 47.1
Gorai.008G260200 Gossypium raimondii HOM05D008304 ORTHO05D004056 2.9e-06 55.1 81 45.7
GSVIVG01019681001 Vitis vinifera HOM05D008304 ORTHO05D004056 2.9e-06 55.1 86 46.5
MD09G1247900 Malus domestica HOM05D005953 ORTHO05D004056 3.8e-06 54.7 84 44.0
Nitab4.5_0002575g0070 Nicotiana tabacum HOM05D005953 ORTHO05D004056 3.8e-06 54.7 82 52.4
CSS0009794 Camellia sinensis var. sinensis HOM05D005953 ORTHO05D004056 4.9e-06 54.3 81 50.6
CSS0043976 Camellia sinensis var. sinensis HOM05D005953 ORTHO05D004056 4.9e-06 54.3 81 50.6
Gohir.D12G243000 Gossypium hirsutum HOM05D008304 ORTHO05D004056 4.9e-06 54.3 81 45.7
CiPaw.03G176600 Carya illinoinensis HOM05D005953 ORTHO05D004056 6.4e-06 53.9 79 46.8
Prupe.5G132900 Prunus persica HOM05D008304 ORTHO05D004056 6.4e-06 53.9 81 45.7
Sed0010329 Sechium edule HOM05D005953 ORTHO05D004056 6.4e-06 53.9 82 51.2
Thecc.03G217700 Theobroma cacao HOM05D008304 ORTHO05D004056 6.4e-06 53.9 79 46.8
TWI36G1201 Tripterygium wilfordii HOM05D005953 ORTHO05D004056 6.4e-06 53.9 79 49.4
TAR629G3464 Trochodendron aralioides HOM05D008304 ORTHO05D004056 6.4e-06 53.9 79 50.6
arahy.Tifrunner.gnm1.ann1.4Y3SQC Arachis hypogaea HOM05D005953 ORTHO05D004056 8.4e-06 53.5 79 46.8
Haze_09200 Corylus avellana HOM05D008304 ORTHO05D004056 8.4e-06 53.5 84 48.8
DCAR_009746 Daucus carota HOM05D005953 ORTHO05D004056 8.4e-06 53.5 80 53.8


User provided reference genes

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