Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01020461001 Vitis vinifera HOM05D006002 ORTHO05D007651 2.9e-148 528.5 255 100.0
TAR627G1081 Trochodendron aralioides HOM05D006002 ORTHO05D007651 5.5e-115 417.9 257 78.2
QL04p088541 Quercus lobata HOM05D006002 ORTHO05D007651 4.6e-114 414.8 253 76.3
Prupe.4G144100 Prunus persica HOM05D006002 ORTHO05D007651 1.0e-113 413.7 252 76.6
Manes.03G102600 Manihot esculenta HOM05D006002 ORTHO05D007651 3.3e-112 408.7 252 75.8
RcHm_v2.0_Chr5g0027061 Rosa chinensis HOM05D006002 ORTHO05D007651 7.4e-112 407.5 253 75.1
FAN11G0453 Fragaria x ananassa HOM05D006002 ORTHO05D007651 2.8e-111 405.6 243 77.8
FvH4_3g16091 Fragaria vesca HOM05D006002 ORTHO05D007651 6.3e-111 404.4 243 77.4
Potri.003G221400 Populus trichocarpa HOM05D006002 ORTHO05D007651 2.4e-110 402.5 246 78.0
MD10G1197800 Malus domestica HOM05D006002 ORTHO05D007651 4.1e-110 401.7 251 73.7
FAN16G0275 Fragaria x ananassa HOM05D006002 ORTHO05D007651 2.0e-109 399.4 243 76.1
CiPaw.11G062100 Carya illinoinensis HOM05D006002 ORTHO05D007651 5.9e-109 397.9 252 72.6
Eucgr.F01438 Eucalyptus grandis HOM05D006002 ORTHO05D007651 7.7e-109 397.5 248 75.0
Rhsim04G0006400 Rhododendron simsii HOM05D006002 ORTHO05D007651 7.7e-109 397.5 252 74.6
FAN25G3512 Fragaria x ananassa HOM05D006002 ORTHO05D007651 1.0e-108 397.1 243 76.1
Hma1.2p1_0193F.1_g084460 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 3.8e-108 395.2 251 74.9
Hma1.2p1_0193F.1_g084470 Hydrangea macrophylla HOM05D006002 ORTHO05D007651 3.8e-108 395.2 251 74.9
CSS0008604 Camellia sinensis var. sinensis HOM05D006002 ORTHO05D007651 1.9e-107 392.9 256 74.6
Lalb_Chr25g0284701 Lupinus albus HOM05D006002 ORTHO05D007651 1.9e-107 392.9 255 71.4
Nn3g20175 Nelumbo nucifera HOM05D006002 ORTHO05D007651 2.5e-107 392.5 255 72.5
Glyma.15G260100 Glycine max HOM05D006002 ORTHO05D007651 3.2e-107 392.1 251 73.7
vmacro09790 Vaccinium macrocarpon HOM05D006002 ORTHO05D007651 4.2e-107 391.7 243 76.5
TWI53G1943 Tripterygium wilfordii HOM05D006002 ORTHO05D007651 1.6e-106 389.8 255 71.4
Glyma.08G167200 Glycine max HOM05D006002 ORTHO05D007651 2.1e-106 389.4 251 73.7
Psat3g026200 Pisum sativum HOM05D006002 ORTHO05D007651 2.7e-106 389.0 246 73.2
arahy.Tifrunner.gnm1.ann1.0RH0I3 Arachis hypogaea HOM05D006002 ORTHO05D007651 3.6e-106 388.7 248 73.0
Actinidia37107 Actinidia chinensis HOM05D006002 ORTHO05D007651 4.7e-106 388.3 244 76.6
Ciclev10020646m.g Citrus clementina HOM05D006002 ORTHO05D007651 4.7e-106 388.3 256 71.5
arahy.Tifrunner.gnm1.ann1.HWL53Q Arachis hypogaea HOM05D006002 ORTHO05D007651 2.3e-105 386.0 248 72.6
Lj3g0018048 Lotus japonicus HOM05D006002 ORTHO05D007651 2.3e-105 386.0 250 72.8
PGR083G2675 Punica granatum HOM05D006002 ORTHO05D007651 3.9e-105 385.2 250 74.0
COL.COLO4_25103 Corchorus olitorius HOM05D006002 ORTHO05D007651 1.1e-104 383.6 252 74.2
Medtr7g107330 Medicago truncatula HOM05D006002 ORTHO05D007651 2.6e-104 382.5 250 70.8
Sopen07g034460 Solanum pennellii HOM05D006002 ORTHO05D007651 2.6e-104 382.5 250 70.0
Phvul.005G050900 Phaseolus vulgaris HOM05D006002 ORTHO05D007651 1.3e-103 380.2 256 71.5
PGSC0003DMG400022243 Solanum tuberosum HOM05D006002 ORTHO05D007651 1.3e-103 380.2 250 69.2
Lj8A185G55 Lonicera japonica HOM05D006002 ORTHO05D007651 1.7e-103 379.8 250 74.0
CANSAT56G1259 Cannabis sativa HOM05D006002 ORTHO05D007651 3.7e-103 378.6 244 74.2
HanXRQChr11g0335201 Helianthus annuus HOM05D006002 ORTHO05D007651 3.7e-103 378.6 246 72.4
Sabra03G0164800 Salix brachista HOM05D006002 ORTHO05D007651 3.7e-103 378.6 234 76.5
PSO675G3741 Papaver somniferum HOM05D006002 ORTHO05D007651 8.2e-103 377.5 248 71.4
Solyc07g066280.3 Solanum lycopersicum HOM05D006002 ORTHO05D007651 8.2e-103 377.5 250 68.8
AT5G64150 Arabidopsis thaliana HOM05D006002 ORTHO05D007651 1.8e-102 376.3 247 71.7
Thhalv10004403m.g Eutrema salsugineum HOM05D006002 ORTHO05D007651 1.8e-102 376.3 246 70.3
Sp2g27210 Schrenkiella parvula HOM05D006002 ORTHO05D007651 1.8e-102 376.3 246 70.7
Aa31LG1G17780 Aethionema arabicum HOM05D006002 ORTHO05D007651 3.1e-102 375.6 247 70.9
CARHR278060 Cardamine hirsuta HOM05D006002 ORTHO05D007651 3.1e-102 375.6 250 71.2
Ca_09098_v3 Cicer arietinum L. HOM05D006002 ORTHO05D007651 4.1e-102 375.2 252 69.8
BcaB02g09782 Brassica carinata HOM05D006002 ORTHO05D007651 5.3e-102 374.8 249 70.7
BcaC01g02672 Brassica carinata HOM05D006002 ORTHO05D007651 7.0e-102 374.4 250 70.8
A06p30870 Brassica napus HOM05D006002 ORTHO05D007651 9.1e-102 374.0 246 72.0
Cc05_g15870 Coffea canephora HOM05D006002 ORTHO05D007651 9.1e-102 374.0 253 70.4
VMungo1080G0998 Vigna mungo HOM05D001395 ORTHO05D002039 9.1e-102 374.0 242 72.3
PSO541G1619 Papaver somniferum HOM05D006002 ORTHO05D007651 1.2e-101 373.6 248 69.8
BolC3t18471H Brassica oleracea HOM05D006002 ORTHO05D007651 2.0e-101 372.9 250 70.4
Lsat_1_v5_gn_7_116060 Lactuca sativa HOM05D006002 ORTHO05D007651 2.0e-101 372.9 245 71.0
THA.LOC104819332 Tarenaya hassleriana HOM05D006002 ORTHO05D007651 2.6e-101 372.5 252 69.8
CAN.G943.23 Capsicum annuum HOM05D006002 ORTHO05D007651 4.5e-101 371.7 250 68.4
ECA236G2913 Erigeron canadensis HOM05D006002 ORTHO05D007651 4.5e-101 371.7 246 69.9
MBI02_g43301_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 4.5e-101 371.7 255 68.2
AL8G41420 Arabidopsis lyrata HOM05D006002 ORTHO05D007651 7.7e-101 370.9 247 71.7
CsaV3_2G022200 Cucumis sativus L. HOM05D006002 ORTHO05D007651 2.2e-100 369.4 245 70.2
Eucgr.F01442 Eucalyptus grandis HOM05D006002 ORTHO05D007651 2.9e-100 369.0 234 73.5
BraA06t26026Z Brassica rapa HOM05D006002 ORTHO05D007651 3.8e-100 368.6 248 70.2
Migut.M01570 Erythranthe guttata HOM05D006002 ORTHO05D007651 5.0e-100 368.2 251 67.3
Carub.0008s2494 Capsella rubella HOM05D006002 ORTHO05D007651 8.5e-100 367.5 247 70.0
ClCG11G016270 Citrullus lanatus HOM05D006002 ORTHO05D007651 1.5e-99 366.7 245 69.4
Haze_07820 Corylus avellana HOM05D006002 ORTHO05D007651 1.9e-99 366.3 238 71.8
Nitab4.5_0000294g0110 Nicotiana tabacum HOM05D006002 ORTHO05D007651 5.5e-99 364.8 244 68.9
Ah.04g163380 Amaranthus hybridus HOM05D006002 ORTHO05D007651 7.2e-99 364.4 242 69.8
Sed0002243 Sechium edule HOM05D006002 ORTHO05D007651 7.2e-99 364.4 243 68.7
Gohir.A05G076100 Gossypium hirsutum HOM05D006002 ORTHO05D007651 9.4e-99 364.0 260 68.8
unitig_748.g7639 Utricularia gibba HOM05D006002 ORTHO05D007651 9.4e-99 364.0 248 68.1
Nitab4.5_0001235g0050 Nicotiana tabacum HOM05D006002 ORTHO05D007651 1.2e-98 363.6 245 68.6
Sc03g0007860 Simmondsia chinensis HOM05D006002 ORTHO05D007651 1.2e-98 363.6 248 69.8
Aqoxy1G01586 Aquilegia oxysepala HOM05D006002 ORTHO05D007651 3.6e-98 362.1 253 66.0
C03p62100 Brassica napus HOM05D006002 ORTHO05D007651 3.6e-98 362.1 252 68.3
Gorai.009G080200 Gossypium raimondii HOM05D006002 ORTHO05D007651 3.6e-98 362.1 260 68.5
Hund02296 Selenicereus undatus HOM05D006002 ORTHO05D007651 2.3e-97 359.4 243 68.7
SGA_v2.0_scaffold7G03564 Striga asiatica HOM05D006002 ORTHO05D007651 3.0e-97 359.0 250 67.6
Peaxi162Scf00232g00102 Petunia axillaris HOM05D006002 ORTHO05D007651 1.1e-96 357.1 250 66.0
MSTRG.16122 Avicennia marina HOM05D006002 ORTHO05D007651 7.4e-96 354.4 251 66.9
ATR0165G036 Amborella trichopoda HOM05D006002 ORTHO05D007651 9.7e-96 354.0 252 64.7
SalBow8G1862 Salvia bowleyana HOM05D006002 ORTHO05D007651 4.8e-95 351.7 243 68.7
QL04p088993 Quercus lobata HOM05D006002 ORTHO05D007651 1.1e-94 350.5 211 77.7
CDE02G2905 Ceratophyllum demersum HOM05D006002 ORTHO05D007651 7.0e-94 347.8 253 66.0
Duzib168G0541 Durio zibethinus HOM05D006002 ORTHO05D007651 2.6e-93 345.9 258 65.9
HPP92_001894 Vanilla planifolia HOM05D006002 ORTHO05D004222 1.5e-91 340.1 241 69.3
Thecc.03G324000 Theobroma cacao HOM05D006002 ORTHO05D007651 1.0e-89 334.0 255 63.9
QL03p043202 Quercus lobata HOM05D006002 ORTHO05D007651 8.8e-89 330.9 217 72.8
Os12g0612500 Oryza sativa ssp. japonica HOM05D006002 ORTHO05D007651 3.4e-88 328.9 247 61.9
EL10Ac4g08518 Beta vulgaris HOM05D006002 ORTHO05D007651 4.4e-88 328.6 267 59.6
Gohir.1Z049302 Gossypium hirsutum HOM05D006002 ORTHO05D007651 7.5e-88 327.8 230 70.4
Gohir.D05G078800 Gossypium hirsutum HOM05D006002 ORTHO05D007651 1.1e-86 323.9 238 67.2
MBI02_g20986_MAGBIO Magnolia biondii HOM05D006002 ORTHO05D007651 1.8e-86 323.2 255 63.1
MELO3C010553.2 Cucumis melo HOM05D006002 ORTHO05D007651 5.0e-84 315.1 204 71.1
SEGI_37419 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 6.6e-76 288.1 202 64.4
Pp3c1_22930 Physcomitrium patens HOM05D006002 ORTHO05D007651 9.5e-75 284.3 250 54.8
SMO145G0236 Selaginella moellendorffii HOM05D006002 ORTHO05D007651 4.7e-74 282.0 244 56.1
Mapoly0051s0043 Marchantia polymorpha HOM05D006002 ORTHO05D007651 2.0e-72 276.6 254 53.5
MD05G1214000 Malus domestica HOM05D006002 ORTHO05D007651 2.2e-71 273.1 204 64.7
Dinv42524 Davidia involucrata HOM05D006002 ORTHO05D007651 9.2e-70 267.7 243 57.6
AagrBONN_evm.TU.Sc2ySwM_344.4971 Anthoceros agrestis HOM05D006002 ORTHO05D007651 7.3e-67 258.1 233 56.7
Potri.018G000850 Populus trichocarpa HOM05D006002 ORTHO05D007651 5.8e-64 248.4 214 60.3
CBR_g8978 Chara braunii HOM05D006002 ORTHO05D007651 5.4e-62 241.9 217 54.4
Atru.chr2.1886 Acer truncatum HOM05D006002 ORTHO05D007651 2.5e-59 233.0 147 71.4
AUR62041934 Chenopodium quinoa HOM05D006002 ORTHO05D007651 1.6e-53 213.8 155 68.4
Potri.001G003632 Populus trichocarpa HOM05D006002 ORTHO05D007651 1.3e-52 210.7 154 68.8
AUR62035491 Chenopodium quinoa HOM05D006002 ORTHO05D007651 7.3e-51 204.9 155 65.8
Cpa.g.sc42.82 Carica papaya HOM05D006002 ORTHO05D007651 1.6e-50 203.8 126 73.8
TPR.G32276 Trifolium pratense HOM05D006002 ORTHO05D007651 1.4e-49 200.7 130 70.8
Cpa.g.sc42.79 Carica papaya HOM05D006002 ORTHO05D007651 1.5e-48 197.2 207 52.2
Oeu052016.1 Olea europaea HOM05D006002 ORTHO05D007651 4.4e-48 195.7 127 73.2
QL04p062372 Quercus lobata HOM05D006002 ORTHO05D007651 4.4e-48 195.7 129 72.1
MCO01G477 Micromonas commoda HOM05D006002 ORTHO05D007651 3.7e-47 192.6 281 40.2
Cfa022974 Carpinus fangiana HOM05D006002 ORTHO05D007651 1.1e-46 191.0 129 69.8
Zm00001eb031660 Zea mays HOM05D006002 ORTHO05D007651 3.5e-45 186.0 127 63.8
TPR.G18376 Trifolium pratense HOM05D006002 ORTHO05D007651 1.0e-44 184.5 122 67.2
Cre07.g337516 Chlamydomonas reinhardtii HOM05D006002 ORTHO05D007651 1.4e-41 174.1 318 34.6
MD05G1214300 Malus domestica HOM05D006002 ORTHO05D007651 2.4e-38 163.3 108 75.0
Actinidia35439 Actinidia chinensis HOM05D006002 ORTHO05D007651 7.1e-38 161.8 118 68.6
SEGI_15629 Sequoiadendron giganteum HOM05D006002 ORTHO05D007651 2.1e-37 160.2 121 59.5
PRCOL_00003514 Prasinoderma coloniale HOM05D006002 ORTHO05D007651 3.1e-33 146.4 325 32.6
QL04p088694 Quercus lobata HOM05D006002 ORTHO05D007651 1.3e-31 141.0 129 57.4
COL.COLO4_30126 Corchorus olitorius HOM05D006002 ORTHO05D007651 1.9e-30 137.1 85 72.9
QL04p089617 Quercus lobata HOM05D002182 ORTHO05D004671 5.1e-28 129.0 126 57.9
BcaB04g17517 Brassica carinata HOM05D006002 ORTHO05D007651 9.9e-24 114.8 77 66.2
QL04p089868 Quercus lobata HOM05D006002 ORTHO05D007651 3.5e-21 106.3 71 69.0
QL03p043192 Quercus lobata HOM05D006002 ORTHO05D007651 7.9e-21 105.1 61 78.7
Cfa023409 Carpinus fangiana HOM05D006002 ORTHO05D126491 9.6e-11 71.6 201 29.9
PSO675G4619 Papaver somniferum HOM05D000047 ORTHO05D000044 3.7e-10 69.7 109 39.4
CAN.G42.13 Capsicum annuum HOM05D006002 ORTHO05D007651 1.1e-09 68.2 55 61.8
CAN.G548.23 Capsicum annuum HOM05D006002 ORTHO05D007651 1.8e-09 67.4 137 35.0


User provided reference genes

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