Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01020385001 Vitis vinifera HOM05D004770 ORTHO05D005572 9.7e-46 186.4 92 100.0
GSVIVG01017585001 Vitis vinifera HOM05D004770 ORTHO05D005572 2.1e-16 89.0 49 89.8
Atru.chr5.1488 Acer truncatum HOM05D004770 ORTHO05D005572 2.8e-16 88.6 114 47.4
Oeu025750.1 Olea europaea HOM05D004770 ORTHO05D005572 8.0e-16 87.0 114 45.6
GSVIVG01001190001 Vitis vinifera HOM05D004770 ORTHO05D005572 8.0e-16 87.0 114 48.2
Nn1g02388 Nelumbo nucifera HOM05D004770 ORTHO05D005572 4.0e-15 84.7 114 45.6
Ciclev10022091m.g Citrus clementina HOM05D004770 ORTHO05D005572 1.5e-14 82.8 114 44.7
Manes.01G205200 Manihot esculenta HOM05D004770 ORTHO05D005572 2.0e-14 82.4 114 43.9
Potri.002G049900 Populus trichocarpa HOM05D004770 ORTHO05D005572 2.0e-14 82.4 114 44.7
Potri.005G212800 Populus trichocarpa HOM05D004770 ORTHO05D005572 2.0e-14 82.4 114 43.0
Hma1.2p1_2357F.1_g320590 Hydrangea macrophylla HOM05D004770 ORTHO05D005572 3.4e-14 81.6 114 44.7
Nn6g34126 Nelumbo nucifera HOM05D004770 ORTHO05D005572 4.4e-14 81.3 114 44.7
DCAR_002713 Daucus carota HOM05D004770 ORTHO05D005572 5.7e-14 80.9 114 43.0
Sabra05G0162600 Salix brachista HOM05D004770 ORTHO05D005572 5.7e-14 80.9 114 43.0
HPP92_017651 Vanilla planifolia HOM05D004770 ORTHO05D005572 5.7e-14 80.9 114 43.0
BcaNung03978 Brassica carinata HOM05D004770 ORTHO05D005572 7.5e-14 80.5 114 43.0
Cc01_g06090 Coffea canephora HOM05D004770 ORTHO05D005572 7.5e-14 80.5 114 43.0
QL01p010878 Quercus lobata HOM05D004770 ORTHO05D005572 7.5e-14 80.5 114 45.6
BcaNung02803 Brassica carinata HOM05D004770 ORTHO05D005572 9.8e-14 80.1 114 42.1
A06p36610 Brassica napus HOM05D004770 ORTHO05D005572 9.8e-14 80.1 114 43.0
C07p41870 Brassica napus HOM05D004770 ORTHO05D005572 9.8e-14 80.1 114 42.1
BraA06t26586Z Brassica rapa HOM05D004770 ORTHO05D005572 9.8e-14 80.1 114 43.0
ECA248G2232 Erigeron canadensis HOM05D004770 ORTHO05D005572 9.8e-14 80.1 114 45.6
PGR031G3940 Punica granatum HOM05D004770 ORTHO05D005572 9.8e-14 80.1 114 43.0
QL01p011010 Quercus lobata HOM05D004770 ORTHO05D005572 9.8e-14 80.1 114 45.6
Aa31LG10G17080 Aethionema arabicum HOM05D004770 ORTHO05D005572 1.3e-13 79.7 114 43.0
Thhalv10004885m.g Eutrema salsugineum HOM05D004770 ORTHO05D005572 1.3e-13 79.7 114 42.1
Sp2g21620 Schrenkiella parvula HOM05D004770 ORTHO05D005572 1.3e-13 79.7 114 43.0
Lj1A49T61 Lonicera japonica HOM05D004770 ORTHO05D005572 1.7e-13 79.3 114 43.9
Sabra02G0040800 Salix brachista HOM05D004770 ORTHO05D005572 1.7e-13 79.3 114 43.0
Migut.D00330 Erythranthe guttata HOM05D004770 ORTHO05D005572 2.2e-13 79.0 114 43.9
Glyma.17G044400 Glycine max HOM05D004770 ORTHO05D005572 2.2e-13 79.0 114 43.9
SalBow4G2779 Salvia bowleyana HOM05D004770 ORTHO05D005572 2.8e-13 78.6 114 43.0
HanXRQChr08g0213371 Helianthus annuus HOM05D004770 ORTHO05D005572 3.7e-13 78.2 114 45.6
Eucgr.G02085 Eucalyptus grandis HOM05D004770 ORTHO05D005572 4.9e-13 77.8 114 43.0
Glyma.18G056100 Glycine max HOM05D004770 ORTHO05D005572 4.9e-13 77.8 114 41.2
Sp5g00290 Schrenkiella parvula HOM05D004770 ORTHO05D005572 4.9e-13 77.8 114 41.2
PSO832G1010 Papaver somniferum HOM05D004770 ORTHO05D005572 6.3e-13 77.4 114 42.1
Actinidia00788 Actinidia chinensis HOM05D004770 ORTHO05D005572 8.3e-13 77.0 114 42.1
CiPaw.07G089000 Carya illinoinensis HOM05D004770 ORTHO05D005572 8.3e-13 77.0 114 41.2
Haze_04673 Corylus avellana HOM05D004770 ORTHO05D005572 8.3e-13 77.0 114 40.4
Duzib138G1187 Durio zibethinus HOM05D004770 ORTHO05D005572 8.3e-13 77.0 114 42.1
Lj3A581T22 Lonicera japonica HOM05D004770 ORTHO05D005572 8.3e-13 77.0 114 43.0
TAR362G0723 Trochodendron aralioides HOM05D004770 ORTHO05D005572 8.3e-13 77.0 114 42.1
CANSAT80G2828 Cannabis sativa HOM05D004770 ORTHO05D005572 1.1e-12 76.6 114 41.2
CARHR187390 Cardamine hirsuta HOM05D004770 ORTHO05D005572 1.1e-12 76.6 114 43.0
Peaxi162Scf00783g00122 Petunia axillaris HOM05D004770 ORTHO05D005572 1.1e-12 76.6 114 43.9
SGA_v2.0_scaffold1G00513 Striga asiatica HOM05D004770 ORTHO05D005572 1.1e-12 76.6 114 41.2
SGA_v2.0_scaffold80G25747 Striga asiatica HOM05D004770 ORTHO05D005572 1.1e-12 76.6 114 42.1
Rhsim13G0027500 Rhododendron simsii HOM05D004770 ORTHO05D005572 1.4e-12 76.3 114 43.0
SalBow7G1168 Salvia bowleyana HOM05D004770 ORTHO05D005572 1.4e-12 76.3 114 40.4
Thecc.01G273700 Theobroma cacao HOM05D004770 ORTHO05D005572 1.4e-12 76.3 114 41.2
VMungo0720G0347 Vigna mungo HOM05D004770 ORTHO05D005572 1.4e-12 76.3 114 41.2
AL2G11930 Arabidopsis lyrata HOM05D004770 ORTHO05D005572 1.8e-12 75.9 114 42.1
AL2G11990 Arabidopsis lyrata HOM05D004770 ORTHO05D005572 1.8e-12 75.9 114 42.1
CSS0005681 Camellia sinensis var. sinensis HOM05D004770 ORTHO05D005572 1.8e-12 75.9 114 43.9
Cfa006174 Carpinus fangiana HOM05D004770 ORTHO05D005572 1.8e-12 75.9 114 40.4
COL.COLO4_09057 Corchorus olitorius HOM05D001769 ORTHO05D001695 1.8e-12 75.9 114 43.0
Dinv34783 Davidia involucrata HOM05D004770 ORTHO05D005572 1.8e-12 75.9 114 43.0
THA.LOC104817561 Tarenaya hassleriana HOM05D004770 ORTHO05D005572 1.8e-12 75.9 114 41.2
Aqoxy2G03435 Aquilegia oxysepala HOM05D004770 ORTHO05D005572 2.4e-12 75.5 114 43.0
Carub.0005s0602 Capsella rubella HOM05D004770 ORTHO05D005572 2.4e-12 75.5 114 42.1
Carub.0006s2388 Capsella rubella HOM05D004770 ORTHO05D005572 2.4e-12 75.5 114 42.1
Nitab4.5_0004355g0020 Nicotiana tabacum HOM05D004770 ORTHO05D005572 2.4e-12 75.5 114 43.9
Phvul.007G249400 Phaseolus vulgaris HOM05D004770 ORTHO05D005572 2.4e-12 75.5 114 41.2
Actinidia24914 Actinidia chinensis HOM05D004770 ORTHO05D005572 4.1e-12 74.7 114 41.2
Lj3g0010058 Lotus japonicus HOM05D004770 ORTHO05D005572 4.1e-12 74.7 114 43.0
DCAR_012498 Daucus carota HOM05D004770 ORTHO05D005572 5.4e-12 74.3 114 41.2
vmacro14906 Vaccinium macrocarpon HOM05D004770 ORTHO05D005572 5.4e-12 74.3 114 43.0
AT5G26110 Arabidopsis thaliana HOM05D004770 ORTHO05D005572 7.0e-12 73.9 114 41.2
Nitab4.5_0000759g0280 Nicotiana tabacum HOM05D004770 ORTHO05D005572 7.0e-12 73.9 114 43.0
unitig_0.g135 Utricularia gibba HOM05D004770 ORTHO05D005572 7.0e-12 73.9 114 40.4
Prupe.8G236800 Prunus persica HOM05D004770 ORTHO05D005572 9.2e-12 73.6 116 43.1
CAN.G1549.14 Capsicum annuum HOM05D004770 ORTHO05D005572 1.2e-11 73.2 114 41.2
CAN.G1549.26 Capsicum annuum HOM05D004770 ORTHO05D005572 1.2e-11 73.2 114 42.1
PGSC0003DMG400017838 Solanum tuberosum HOM05D004770 ORTHO05D005572 1.2e-11 73.2 110 42.7
ClCG03G016560 Citrullus lanatus HOM05D004770 ORTHO05D005572 1.6e-11 72.8 114 42.1
Lsat_1_v5_gn_5_186200 Lactuca sativa HOM05D004770 ORTHO05D005572 1.6e-11 72.8 114 43.0
QL12p020786 Quercus lobata HOM05D004770 ORTHO05D005572 1.6e-11 72.8 114 40.4
Sed0021970 Sechium edule HOM05D004770 ORTHO05D005572 1.6e-11 72.8 114 42.1
ATR0665G226 Amborella trichopoda HOM05D004770 ORTHO05D005572 2.0e-11 72.4 114 41.2
CSS0032403 Camellia sinensis var. sinensis HOM05D004770 ORTHO05D005572 2.0e-11 72.4 114 43.0
MELO3C015367.2 Cucumis melo HOM05D004770 ORTHO05D005572 2.0e-11 72.4 114 42.1
Nitab4.5_0000208g0100 Nicotiana tabacum HOM05D004770 ORTHO05D005572 2.0e-11 72.4 114 41.2
arahy.Tifrunner.gnm1.ann1.RIN6C8 Arachis hypogaea HOM05D004770 ORTHO05D005572 2.7e-11 72.0 114 39.5
arahy.Tifrunner.gnm1.ann1.S84LE1 Arachis hypogaea HOM05D004770 ORTHO05D005572 2.7e-11 72.0 114 39.5
arahy.Tifrunner.gnm1.ann1.W9SXTW Arachis hypogaea HOM05D004770 ORTHO05D005572 2.7e-11 72.0 114 39.5
arahy.Tifrunner.gnm1.ann1.YE39MU Arachis hypogaea HOM05D004770 ORTHO05D005572 2.7e-11 72.0 114 39.5
Lj2g0018175 Lotus japonicus HOM05D004770 ORTHO05D005572 2.7e-11 72.0 114 41.2
Lalb_Chr18g0051481 Lupinus albus HOM05D004770 ORTHO05D005572 2.7e-11 72.0 114 43.0
MBI15_g39353_MAGBIO Magnolia biondii HOM05D004770 ORTHO05D005572 2.7e-11 72.0 114 39.5
Nitab4.5_0006132g0020 Nicotiana tabacum HOM05D004770 ORTHO05D005572 2.7e-11 72.0 114 41.2
TWI39G0629 Tripterygium wilfordii HOM05D004770 ORTHO05D005572 2.7e-11 72.0 114 40.4
Solyc06g084160.4 Solanum lycopersicum HOM05D004770 ORTHO05D005572 3.5e-11 71.6 114 42.1
PGSC0003DMG400020135 Solanum tuberosum HOM05D004770 ORTHO05D005572 3.5e-11 71.6 114 42.1
vmacro02598 Vaccinium macrocarpon HOM05D004770 ORTHO05D005572 3.5e-11 71.6 115 41.7
Cpa.g.sc41.63 Carica papaya HOM05D004770 ORTHO05D005572 4.5e-11 71.2 114 40.4
MBI02_g08255_MAGBIO Magnolia biondii HOM05D004770 ORTHO05D005572 4.5e-11 71.2 114 39.5
CsaV3_1G039420 Cucumis sativus L. HOM05D004770 ORTHO05D005572 5.9e-11 70.9 114 43.0
Gohir.D12G003300 Gossypium hirsutum HOM05D004770 ORTHO05D005572 5.9e-11 70.9 114 41.2
Gorai.008G003100 Gossypium raimondii HOM05D004770 ORTHO05D005572 5.9e-11 70.9 114 41.2
PSO170G2661 Papaver somniferum HOM05D004770 ORTHO05D005572 7.8e-11 70.5 114 38.6
Ca_15021_v3 Cicer arietinum L. HOM05D004770 ORTHO05D005572 1.0e-10 70.1 114 41.2
FAN20G2343 Fragaria x ananassa HOM05D004770 ORTHO05D005572 1.0e-10 70.1 116 40.5
FAN27G1754 Fragaria x ananassa HOM05D004770 ORTHO05D005572 1.0e-10 70.1 116 40.5
AUR62012543 Chenopodium quinoa HOM05D004770 ORTHO05D005572 1.3e-10 69.7 114 37.7
FvH4_2g23150 Fragaria vesca HOM05D004770 ORTHO05D005572 1.3e-10 69.7 116 40.5
AUR62032312 Chenopodium quinoa HOM05D004770 ORTHO05D005572 1.7e-10 69.3 114 38.6
Lj6g0011383 Lotus japonicus HOM05D004770 ORTHO05D005572 1.7e-10 69.3 114 39.5
MD11G1280900 Malus domestica HOM05D004770 ORTHO05D005572 1.7e-10 69.3 116 41.4
PSO210G1988 Papaver somniferum HOM05D004770 ORTHO05D005572 1.7e-10 69.3 114 37.7
Phvul.006G075100 Phaseolus vulgaris HOM05D004770 ORTHO05D005572 1.7e-10 69.3 114 39.5
Solyc08g005140.3 Solanum lycopersicum HOM05D004770 ORTHO05D005572 1.7e-10 69.3 114 41.2
Sopen08g001150 Solanum pennellii HOM05D004770 ORTHO05D005572 1.7e-10 69.3 114 41.2
TPR.G25688 Trifolium pratense HOM05D004770 ORTHO05D005572 1.7e-10 69.3 114 40.4
Sopen06g035540 Solanum pennellii HOM05D004770 ORTHO05D005572 2.3e-10 68.9 114 40.4
Medtr3g465790 Medicago truncatula HOM05D004770 ORTHO05D005572 2.9e-10 68.6 114 40.4
EL10Ac5g10525 Beta vulgaris HOM05D004770 ORTHO05D005572 3.8e-10 68.2 114 39.5
Migut.N02033 Erythranthe guttata HOM05D004770 ORTHO05D005572 5.0e-10 67.8 114 38.6
Gohir.A12G003600 Gossypium hirsutum HOM05D004770 ORTHO05D005572 5.0e-10 67.8 114 40.4
BolC7t44719H Brassica oleracea HOM05D004770 ORTHO05D005572 8.6e-10 67.0 137 35.0
RcHm_v2.0_Chr6g0290401 Rosa chinensis HOM05D004770 ORTHO05D005572 8.6e-10 67.0 116 39.7
Zm00001eb222890 Zea mays HOM05D004770 ORTHO05D005572 8.6e-10 67.0 114 40.4
VMungo0540G0250 Vigna mungo HOM05D004770 ORTHO05D005572 1.9e-09 65.9 114 40.4
Hund02843 Selenicereus undatus HOM05D004770 ORTHO05D005572 3.3e-09 65.1 114 36.8
Actinidia09114 Actinidia chinensis HOM05D004770 ORTHO05D005572 1.4e-07 59.7 111 36.0
Mapoly0133s0052 Marchantia polymorpha HOM05D004770 ORTHO05D005572 1.4e-07 59.7 110 37.3
SEGI_22603 Sequoiadendron giganteum HOM05D004770 ORTHO05D005572 1.8e-07 59.3 114 36.0
SEGI_19127 Sequoiadendron giganteum HOM05D004770 ORTHO05D005572 2.3e-07 58.9 114 35.1
TAR633G0687 Trochodendron aralioides HOM05D004770 ORTHO05D005572 2.0e-06 55.8 48 64.6
SMO358G0317 Selaginella moellendorffii HOM05D004770 ORTHO05D005572 7.5e-06 53.9 109 35.8


User provided reference genes

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