Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01020299001 Vitis vinifera HOM05D000101 ORTHO05D000089 6.8e-29 129.8 58 100.0
GSVIVG01020290001 Vitis vinifera HOM05D000101 ORTHO05D000089 4.4e-20 100.5 54 83.3
GSVIVG01020295001 Vitis vinifera HOM05D000101 ORTHO05D000089 1.3e-19 99.0 54 79.6
GSVIVG01020286001 Vitis vinifera HOM05D000101 ORTHO05D000089 8.1e-14 79.7 53 64.2
GSVIVG01020289001 Vitis vinifera HOM05D000101 ORTHO05D000089 2.6e-12 74.7 54 63.0
GSVIVG01020292001 Vitis vinifera HOM05D000101 ORTHO05D000089 4.1e-10 67.4 58 58.6
PSO675G8281 Papaver somniferum HOM05D000101 ORTHO05D000089 5.4e-10 67.0 56 51.8
GSVIVG01017134001 Vitis vinifera HOM05D000101 ORTHO05D000089 7.1e-10 66.6 53 52.8
GSVIVG01017148001 Vitis vinifera HOM05D000101 ORTHO05D000089 7.1e-10 66.6 53 52.8
PSO675G3792 Papaver somniferum HOM05D000101 ORTHO05D000089 9.2e-10 66.2 53 47.2
PSO675G2074 Papaver somniferum HOM05D000101 ORTHO05D000089 1.2e-09 65.9 52 50.0
PSO063G1332 Papaver somniferum HOM05D000101 ORTHO05D000089 1.6e-09 65.5 50 52.0
PSO135G0152 Papaver somniferum HOM05D000101 ORTHO05D000089 3.5e-09 64.3 54 48.1
GSVIVG01020293001 Vitis vinifera HOM05D000101 ORTHO05D000089 4.6e-09 63.9 55 54.5
TAR636G3068 Trochodendron aralioides HOM05D000101 ORTHO05D000089 6.0e-09 63.5 52 51.9
Dinv11894 Davidia involucrata HOM05D000101 ORTHO05D000089 1.0e-08 62.8 52 51.9
GSVIVG01017142001 Vitis vinifera HOM05D000101 ORTHO05D000089 1.3e-08 62.4 53 49.1
Nn1g09664 Nelumbo nucifera HOM05D000101 ORTHO05D000089 1.7e-08 62.0 52 48.1
PSO717G0087 Papaver somniferum HOM05D000101 ORTHO05D000089 1.7e-08 62.0 53 47.2
Rhsim04G0235600 Rhododendron simsii HOM05D000101 ORTHO05D000089 1.7e-08 62.0 53 52.8
PSO832G2189 Papaver somniferum HOM05D000101 ORTHO05D000089 2.3e-08 61.6 52 50.0
Dinv24082 Davidia involucrata HOM05D000101 ORTHO05D000089 3.0e-08 61.2 50 54.0
TPR.G15388 Trifolium pratense HOM05D000101 ORTHO05D000089 3.0e-08 61.2 51 51.0
TAR365G0335 Trochodendron aralioides HOM05D000101 ORTHO05D000089 3.0e-08 61.2 52 51.9
PSO675G6392 Papaver somniferum HOM05D000101 ORTHO05D000089 3.9e-08 60.8 53 47.2
GSVIVG01017149001 Vitis vinifera HOM05D000101 ORTHO05D000089 3.9e-08 60.8 53 50.9
TAR365G0739 Trochodendron aralioides HOM05D000101 ORTHO05D000089 5.1e-08 60.5 52 51.9
GSVIVG01017143001 Vitis vinifera HOM05D000101 ORTHO05D000089 5.1e-08 60.5 53 47.2
PSO832G4434 Papaver somniferum HOM05D000101 ORTHO05D000089 8.6e-08 59.7 46 52.2
TAR365G0433 Trochodendron aralioides HOM05D000101 ORTHO05D000089 1.1e-07 59.3 52 50.0
Nn1g09641 Nelumbo nucifera HOM05D000101 ORTHO05D000089 1.5e-07 58.9 52 46.2
PSO675G4931 Papaver somniferum HOM05D000101 ORTHO05D000089 1.5e-07 58.9 52 50.0
GSVIVG01017225001 Vitis vinifera HOM05D000101 ORTHO05D000089 1.5e-07 58.9 55 43.6
Medtr4g091380 Medicago truncatula HOM05D000101 ORTHO05D000089 1.9e-07 58.5 42 57.1
PSO732G0686 Papaver somniferum HOM05D000101 ORTHO05D000089 1.9e-07 58.5 53 49.1
TAR365G0070 Trochodendron aralioides HOM05D000101 ORTHO05D000089 1.9e-07 58.5 52 51.9
Ciclev10027635m.g Citrus clementina HOM05D000101 ORTHO05D000089 2.5e-07 58.2 56 42.9
TAR365G0346 Trochodendron aralioides HOM05D000101 ORTHO05D000089 2.5e-07 58.2 52 50.0
GSVIVG01017079001 Vitis vinifera HOM05D000101 ORTHO05D000089 2.5e-07 58.2 52 50.0
GSVIVG01017232001 Vitis vinifera HOM05D000101 ORTHO05D000089 2.5e-07 58.2 52 51.9
Psat7g108120 Pisum sativum HOM05D000101 ORTHO05D000089 3.3e-07 57.8 53 47.2
Psat7g108160 Pisum sativum HOM05D000101 ORTHO05D000089 3.3e-07 57.8 53 47.2
Thecc.07G037200 Theobroma cacao HOM05D000101 ORTHO05D000089 3.3e-07 57.8 45 53.3
TAR389G0001 Trochodendron aralioides HOM05D000101 ORTHO05D000089 3.3e-07 57.8 52 50.0
ATR1120G102 Amborella trichopoda HOM05D000101 ORTHO05D017265 4.3e-07 57.4 52 48.1
Medtr1g028720 Medicago truncatula HOM05D000101 ORTHO05D000089 5.6e-07 57.0 54 44.4
Rhsim04G0236300 Rhododendron simsii HOM05D000101 ORTHO05D000089 7.3e-07 56.6 53 49.1
Aqoxy5G02959 Aquilegia oxysepala HOM05D000101 ORTHO05D000089 9.5e-07 56.2 56 44.6
CAN.G137.49 Capsicum annuum HOM05D000101 ORTHO05D000089 9.5e-07 56.2 52 44.2
PSO541G0907 Papaver somniferum HOM05D000101 ORTHO05D000089 9.5e-07 56.2 52 46.2
TAR365G0523 Trochodendron aralioides HOM05D000101 ORTHO05D000089 9.5e-07 56.2 52 48.1
ATR0037G066 Amborella trichopoda HOM05D000101 ORTHO05D000089 1.2e-06 55.8 52 48.1
Ciclev10026129m.g Citrus clementina HOM05D000101 ORTHO05D000089 1.2e-06 55.8 54 44.4
TAR636G1033 Trochodendron aralioides HOM05D000101 ORTHO05D000089 1.2e-06 55.8 56 44.6
Medtr4g091450 Medicago truncatula HOM05D000101 ORTHO05D000089 1.6e-06 55.5 44 54.5
PSO566G0271 Papaver somniferum HOM05D000101 ORTHO05D000089 1.6e-06 55.5 42 57.1
Cfa020427 Carpinus fangiana HOM05D000101 ORTHO05D000089 2.1e-06 55.1 54 46.3
Psat7g108240 Pisum sativum HOM05D000101 ORTHO05D000089 2.1e-06 55.1 53 45.3
CAN.G673.10 Capsicum annuum HOM05D000101 ORTHO05D000089 2.8e-06 54.7 53 47.2
CAN.G845.10 Capsicum annuum HOM05D000101 ORTHO05D000089 2.8e-06 54.7 53 45.3
Gohir.A01G018600 Gossypium hirsutum HOM05D000101 ORTHO05D000089 2.8e-06 54.7 52 46.2
Hma1.2p1_1295F.1_g273900 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 2.8e-06 54.7 55 41.8
Manes.11G052150 Manihot esculenta HOM05D000101 ORTHO05D000089 2.8e-06 54.7 52 48.1
Rhsim04G0237100 Rhododendron simsii HOM05D000101 ORTHO05D000089 2.8e-06 54.7 48 50.0
Aqoxy402s001 Aquilegia oxysepala HOM05D000101 ORTHO05D000089 3.6e-06 54.3 45 46.7
Dinv22309 Davidia involucrata HOM05D000101 ORTHO05D000089 3.6e-06 54.3 56 39.3
Duzib212G0304 Durio zibethinus HOM05D000101 ORTHO05D002559 3.6e-06 54.3 54 40.7
Eucgr.F04172 Eucalyptus grandis HOM05D000101 ORTHO05D000089 3.6e-06 54.3 49 46.9
PGSC0003DMG400002271 Solanum tuberosum HOM05D000101 ORTHO05D000089 3.6e-06 54.3 53 45.3
PGSC0003DMG400016656 Solanum tuberosum HOM05D000101 ORTHO05D000089 3.6e-06 54.3 54 40.7
TAR365G0503 Trochodendron aralioides HOM05D000101 ORTHO05D000089 3.6e-06 54.3 51 45.1
Gohir.A01G018000 Gossypium hirsutum HOM05D000101 ORTHO05D000089 4.7e-06 53.9 55 41.8
Gorai.002G018700 Gossypium raimondii HOM05D000101 ORTHO05D000089 4.7e-06 53.9 53 43.4
Hma1.2p1_0133F.1_g061320 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 4.7e-06 53.9 52 42.3
Hma1.2p1_1742F.1_g300170 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 4.7e-06 53.9 52 40.4
Rhsim04G0238000 Rhododendron simsii HOM05D000101 ORTHO05D003282 4.7e-06 53.9 53 47.2
GSVIVG01017269001 Vitis vinifera HOM05D000101 ORTHO05D000089 4.7e-06 53.9 54 46.3
Ciclev10024868m.g Citrus clementina HOM05D000101 ORTHO05D000089 6.2e-06 53.5 55 40.0
Duzib235G0358 Durio zibethinus HOM05D000101 ORTHO05D000089 6.2e-06 53.5 52 44.2
Eucgr.F04170 Eucalyptus grandis HOM05D000101 ORTHO05D000089 6.2e-06 53.5 49 46.9
Nn1g09704 Nelumbo nucifera HOM05D000101 ORTHO05D000089 6.2e-06 53.5 50 46.0
TAR636G0948 Trochodendron aralioides HOM05D000101 ORTHO05D000089 6.2e-06 53.5 56 42.9
CAN.G845.2 Capsicum annuum HOM05D000101 ORTHO05D000089 8.1e-06 53.1 58 43.1
Ciclev10024873m.g Citrus clementina HOM05D000101 ORTHO05D000089 8.1e-06 53.1 47 51.1
Gohir.D01G016750 Gossypium hirsutum HOM05D000101 ORTHO05D000089 8.1e-06 53.1 53 41.5
Gohir.D01G016866 Gossypium hirsutum HOM05D000101 ORTHO05D000089 8.1e-06 53.1 55 43.6
Hma1.2p1_0348F.1_g131880 Hydrangea macrophylla HOM05D000101 ORTHO05D000089 8.1e-06 53.1 52 42.3
Sabra13G0006300 Salix brachista HOM05D000101 ORTHO05D000089 8.1e-06 53.1 48 47.9


User provided reference genes

Program Settings