Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01020179001 Vitis vinifera HOM05D006250 ORTHO05D007107 2.8e-168 596.3 631 100.0
Dinv31115 Davidia involucrata HOM05D006250 ORTHO05D007107 3.1e-95 353.6 636 82.2
Haze_12133 Corylus avellana HOM05D006250 ORTHO05D007107 4.2e-92 343.2 630 79.4
COL.COLO4_19523 Corchorus olitorius HOM05D006250 ORTHO05D007107 1.0e-85 322.0 622 78.9
Hma1.2p1_1049F.1_g251780 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 2.3e-85 320.9 626 80.2
Hma1.2p1_2649F.1_g326135 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 2.3e-85 320.9 626 80.2
CiPaw.05G146100 Carya illinoinensis HOM05D006250 ORTHO05D007107 2.5e-84 317.4 635 79.7
QL03p066863 Quercus lobata HOM05D006250 ORTHO05D007107 6.8e-82 309.3 637 77.4
Gorai.009G344900 Gossypium raimondii HOM05D006250 ORTHO05D007107 7.5e-81 305.8 592 80.6
Thecc.02G242000 Theobroma cacao HOM05D006250 ORTHO05D007107 1.3e-80 305.1 627 77.4
Gohir.D05G321400 Gossypium hirsutum HOM05D006250 ORTHO05D007107 2.2e-80 304.3 592 80.4
arahy.Tifrunner.gnm1.ann1.11GRU6 Arachis hypogaea HOM05D006250 ORTHO05D007107 1.1e-79 302.0 629 74.7
Ciclev10031015m.g Citrus clementina HOM05D006250 ORTHO05D007107 1.4e-79 301.6 632 76.7
arahy.Tifrunner.gnm1.ann1.ST0DQ2 Arachis hypogaea HOM05D006250 ORTHO05D007107 4.1e-79 300.1 629 74.6
TWI18G0037 Tripterygium wilfordii HOM05D006250 ORTHO05D007107 4.6e-78 296.6 610 77.9
Eucgr.B03367 Eucalyptus grandis HOM05D006250 ORTHO05D007107 7.8e-78 295.8 566 83.4
Manes.05G091350 Manihot esculenta HOM05D006250 ORTHO05D007107 8.6e-77 292.4 561 83.1
Potri.008G193700 Populus trichocarpa HOM05D006250 ORTHO05D007107 3.3e-76 290.4 563 83.1
Gohir.A05G319200 Gossypium hirsutum HOM05D006250 ORTHO05D007107 9.5e-76 288.9 626 76.4
Cc11_g14200 Coffea canephora HOM05D006250 ORTHO05D007107 1.2e-75 288.5 576 79.5
FAN22G2376 Fragaria x ananassa HOM05D006250 ORTHO05D007107 6.2e-75 286.2 606 79.2
Duzib251G0023 Durio zibethinus HOM05D006250 ORTHO05D007107 8.0e-75 285.8 569 81.7
FAN17G0914 Fragaria x ananassa HOM05D006250 ORTHO05D007107 1.4e-74 285.0 617 78.3
Lalb_Chr09g0326521 Lupinus albus HOM05D006250 ORTHO05D007107 6.8e-74 282.7 628 74.2
PGSC0003DMG400015603 Solanum tuberosum HOM05D006250 ORTHO05D007107 6.4e-72 276.2 581 79.5
Migut.L01451 Erythranthe guttata HOM05D006250 ORTHO05D007107 1.1e-71 275.4 621 75.8
Solyc05g006170.4 Solanum lycopersicum HOM05D006250 ORTHO05D007107 1.4e-71 275.0 627 75.8
CAN.G1160.10 Capsicum annuum HOM05D006250 ORTHO05D007107 1.9e-71 274.6 604 76.2
MD13G1086400 Malus domestica HOM05D006250 ORTHO05D007107 1.9e-71 274.6 631 76.2
Aqoxy3G03090 Aquilegia oxysepala HOM05D006250 ORTHO05D007107 2.4e-71 274.2 595 78.7
TAR371G0500 Trochodendron aralioides HOM05D006250 ORTHO05D007107 3.2e-71 273.9 632 65.2
FvH4_4g35070 Fragaria vesca HOM05D006250 ORTHO05D007107 5.4e-71 273.1 606 77.9
Sopen05g002190 Solanum pennellii HOM05D000912 ORTHO05D001232 1.2e-70 271.9 631 75.1
Aa31LG2G10230 Aethionema arabicum HOM05D006250 ORTHO05D007107 1.6e-70 271.6 628 57.0
FAN12G0989 Fragaria x ananassa HOM05D006250 ORTHO05D007107 2.1e-70 271.2 608 73.8
MD16G1085800 Malus domestica HOM05D006250 ORTHO05D007107 7.8e-70 269.2 627 76.2
RcHm_v2.0_Chr4g0444691 Rosa chinensis HOM05D006250 ORTHO05D007107 1.0e-69 268.9 569 81.5
Glyma.01G036200 Glycine max HOM05D006250 ORTHO05D007107 3.0e-69 267.3 558 79.6
TAR629G0559 Trochodendron aralioides HOM05D006250 ORTHO05D007107 3.0e-69 267.3 425 72.5
Glyma.02G029800 Glycine max HOM05D006250 ORTHO05D007107 5.1e-69 266.5 558 80.6
TPR.G13515 Trifolium pratense HOM05D006250 ORTHO05D007107 5.1e-69 266.5 556 81.1
VMungo1215G1343 Vigna mungo HOM05D006250 ORTHO05D007107 8.6e-69 265.8 560 80.7
Prupe.1G260300 Prunus persica HOM05D006250 ORTHO05D007107 3.3e-68 263.8 627 75.6
CSS0049978 Camellia sinensis var. sinensis HOM05D006250 ORTHO05D007107 1.2e-67 261.9 632 76.3
CANSAT01G1928 Cannabis sativa HOM05D006250 ORTHO05D007107 2.1e-67 261.2 582 79.2
Sabra08G0147200 Salix brachista HOM05D006250 ORTHO05D007107 6.2e-67 259.6 601 65.6
Nn3g16985 Nelumbo nucifera HOM05D006250 ORTHO05D007107 1.1e-66 258.8 595 68.6
CDE04G2141 Ceratophyllum demersum HOM05D006250 ORTHO05D007107 5.2e-66 256.5 561 80.4
SalBow2G3220 Salvia bowleyana HOM05D006250 ORTHO05D007107 3.4e-65 253.8 617 75.0
MBI18_g16987_MAGBIO Magnolia biondii HOM05D006250 ORTHO05D007107 1.3e-64 251.9 560 79.8
MSTRG.625 Avicennia marina HOM05D006250 ORTHO05D007107 1.1e-63 248.8 572 77.1
AUR62026573 Chenopodium quinoa HOM05D006250 ORTHO05D007107 1.4e-63 248.4 550 80.5
AUR62039411 Chenopodium quinoa HOM05D006250 ORTHO05D007107 5.4e-63 246.5 551 80.4
VMungo0720G1586 Vigna mungo HOM05D006250 ORTHO05D007107 1.2e-62 245.4 633 72.4
EL10Ac6g13760 Beta vulgaris HOM05D006250 ORTHO05D007107 3.5e-62 243.8 564 79.3
Lsat_1_v5_gn_3_49600 Lactuca sativa HOM05D006250 ORTHO05D007107 3.5e-62 243.8 572 79.5
Phvul.002G075400 Phaseolus vulgaris HOM05D006250 ORTHO05D007107 7.8e-62 242.7 654 67.0
CARHR010650 Cardamine hirsuta HOM05D006250 ORTHO05D007107 2.3e-61 241.1 616 75.5
PSO063G2741 Papaver somniferum HOM05D006250 ORTHO05D007107 2.3e-61 241.1 602 74.8
PSO832G4030 Papaver somniferum HOM05D006250 ORTHO05D007107 3.0e-61 240.7 602 74.6
BolC8t49010H Brassica oleracea HOM05D006250 ORTHO05D007107 3.9e-61 240.4 568 79.4
Lj6A800T42 Lonicera japonica HOM05D006250 ORTHO05D007107 5.1e-61 240.0 641 71.5
BcaC07g38569 Brassica carinata HOM05D006250 ORTHO05D007107 8.6e-61 239.2 567 79.5
Atru.chr11.1955 Acer truncatum HOM05D006250 ORTHO05D007107 1.1e-60 238.8 558 65.8
BraA08t35306Z Brassica rapa HOM05D006250 ORTHO05D007107 1.9e-60 238.0 631 73.9
Lj2g0015976 Lotus japonicus HOM05D006250 ORTHO05D007107 9.6e-60 235.7 536 82.1
Medtr5g035590 Medicago truncatula HOM05D006250 ORTHO05D007107 3.6e-59 233.8 548 80.5
Actinidia15003 Actinidia chinensis HOM05D006250 ORTHO05D007107 1.8e-58 231.5 662 69.8
THA.LOC104816735 Tarenaya hassleriana HOM05D006250 ORTHO05D007107 4.0e-58 230.3 612 75.2
Carub.0001s0994 Capsella rubella HOM05D006250 ORTHO05D007107 1.5e-57 228.4 616 74.2
Sp1g09140 Schrenkiella parvula HOM05D006250 ORTHO05D007107 4.2e-55 220.3 631 71.9
unitig_749.g13267 Utricularia gibba HOM05D006250 ORTHO05D007107 4.2e-55 220.3 591 64.8
Dinv24907 Davidia involucrata HOM05D006250 ORTHO05D007107 9.3e-55 219.2 471 91.7
Thhalv10007114m.g Eutrema salsugineum HOM05D006250 ORTHO05D007107 3.5e-54 217.2 633 72.5
Ah.03g132320 Amaranthus hybridus HOM05D006250 ORTHO05D007107 1.3e-53 215.3 581 63.3
Ca_18091_v3 Cicer arietinum L. HOM05D006250 ORTHO05D007107 3.9e-53 213.8 637 71.6
BcaC05g24872 Brassica carinata HOM05D006250 ORTHO05D007107 6.6e-53 213.0 537 81.4
HanXRQChr10g0288221 Helianthus annuus HOM05D006250 ORTHO05D007107 6.6e-53 213.0 195 60.5
Psat4g140960 Pisum sativum HOM05D006250 ORTHO05D007107 1.1e-52 212.2 185 60.5
C05p08800 Brassica napus HOM05D006250 ORTHO05D007107 1.5e-52 211.8 537 81.2
BolC5t29626H Brassica oleracea HOM05D006250 ORTHO05D007107 1.5e-52 211.8 537 81.2
SGA_v2.0_scaffold8G04258 Striga asiatica HOM05D006250 ORTHO05D007107 5.6e-52 209.9 596 74.8
A06p07280 Brassica napus HOM05D006250 ORTHO05D007107 1.3e-51 208.8 554 79.1
BraA06t23934Z Brassica rapa HOM05D006250 ORTHO05D007107 1.3e-51 208.8 554 79.1
BcaC07g38607 Brassica carinata HOM05D006250 ORTHO05D007107 1.6e-51 208.4 541 80.4
FAN07G1033 Fragaria x ananassa HOM05D006250 ORTHO05D007107 2.1e-51 208.0 254 50.8
AT1G10510 Arabidopsis thaliana HOM05D006250 ORTHO05D007107 2.8e-51 207.6 243 52.3
AL1G21310 Arabidopsis lyrata HOM05D006250 ORTHO05D007107 8.1e-51 206.1 240 52.1
PGR102G1255 Punica granatum HOM05D006250 ORTHO05D007107 1.8e-50 204.9 489 86.3
C08p13750 Brassica napus HOM05D006250 ORTHO05D007107 3.1e-50 204.1 194 58.2
ECA246G3811 Erigeron canadensis HOM05D006250 ORTHO05D007107 5.3e-50 203.4 187 55.1
BcaC05g24932 Brassica carinata HOM05D006250 ORTHO05D007107 6.9e-50 203.0 184 60.9
A08p33910 Brassica napus HOM05D006250 ORTHO05D007107 2.0e-49 201.4 257 49.8
Nitab4.5_0005722g0060 Nicotiana tabacum HOM05D006250 ORTHO05D007107 4.4e-49 200.3 231 52.8
Os06g0237502 Oryza sativa ssp. japonica HOM05D006250 ORTHO05D007107 1.3e-48 198.7 555 73.5
Hund05952 Selenicereus undatus HOM05D006250 ORTHO05D007107 8.4e-48 196.1 615 71.1
ClCG09G022110 Citrullus lanatus HOM05D006250 ORTHO05D007107 3.2e-47 194.1 274 44.9
DCAR_026556 Daucus carota HOM05D006250 ORTHO05D007107 7.9e-46 189.5 153 64.7
ATR0829G105 Amborella trichopoda HOM05D006250 ORTHO05D007107 3.0e-45 187.6 501 79.8
MELO3C002989.2 Cucumis melo HOM05D006250 ORTHO05D007107 5.6e-44 183.3 236 47.5
HPP92_017346 Vanilla planifolia HOM05D006250 ORTHO05D007107 5.6e-44 183.3 591 71.4
Sed0020226 Sechium edule HOM05D006250 ORTHO05D007107 7.3e-44 183.0 237 47.3
Peaxi162Scf00421g00828 Petunia axillaris HOM05D006250 ORTHO05D007107 2.6e-41 174.5 549 74.9
CsaV3_5G025030 Cucumis sativus L. HOM05D006250 ORTHO05D007107 1.7e-40 171.8 216 46.3
Hma1.2p1_1049F.1_g251790 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 2.9e-40 171.0 199 52.8
Hma1.2p1_2649F.1_g326133 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 2.9e-40 171.0 199 52.8
Sc11g0001380 Simmondsia chinensis HOM05D006250 ORTHO05D007107 3.2e-39 167.5 164 59.1
Rhsim12G0124700 Rhododendron simsii HOM05D006250 ORTHO05D007107 5.4e-39 166.8 228 48.2
Lsat_1_v5_gn_4_95161 Lactuca sativa HOM05D006250 ORTHO05D007107 2.7e-38 164.5 140 62.9
Zm00001eb371900 Zea mays HOM05D006250 ORTHO05D007107 6.7e-37 159.8 537 70.8
vmacro16283 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 4.0e-34 150.6 121 65.3
Nitab4.5_0000257g0160 Nicotiana tabacum HOM05D006250 ORTHO05D007107 5.3e-26 123.6 237 39.2
Hma1.2p1_2649F.1_g326137 Hydrangea macrophylla HOM05D006250 ORTHO05D007107 1.3e-24 119.0 238 91.2
TAR629G0016 Trochodendron aralioides HOM05D006250 ORTHO05D007107 2.3e-21 108.2 405 67.2
vmacro16284 Vaccinium macrocarpon HOM05D006250 ORTHO05D007107 2.3e-21 108.2 207 40.6
SEGI_23986 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 1.1e-20 105.9 525 71.8
Lsat_1_v5_gn_4_84060 Lactuca sativa HOM05D006250 ORTHO05D007107 6.5e-16 90.1 64 68.8
AagrBONN_evm.TU.Sc2ySwM_344.3920 Anthoceros agrestis HOM05D006250 ORTHO05D007107 5.5e-15 87.0 71 57.7
DCAR_026558 Daucus carota HOM05D006250 ORTHO05D007107 2.1e-14 85.1 155 41.3
SEGI_34898 Sequoiadendron giganteum HOM05D006250 ORTHO05D007107 3.9e-13 80.9 227 84.1
Pp3c14_24560 Physcomitrium patens HOM05D006250 ORTHO05D007107 2.2e-11 75.1 460 74.8
Pp3c14_24566 Physcomitrium patens HOM05D006250 ORTHO05D007107 2.2e-11 75.1 460 74.8
SMO116G0024 Selaginella moellendorffii HOM05D006250 ORTHO05D007107 9.1e-10 69.7 64 50.0
Mapoly0090s0039 Marchantia polymorpha HOM05D006250 ORTHO05D007107 1.0e-08 66.2 142 33.1
Cpa.g.sc367.5 Carica papaya HOM05D006250 ORTHO05D007107 6.5e-08 63.5 133 39.8
CBR_g61650 Chara braunii HOM05D006250 ORTHO05D007107 1.1e-07 62.8 87 65.5


User provided reference genes

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