Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01020118001 Vitis vinifera HOM05D007593 ORTHO05D009686 4.1e-88 328.2 183 100.0
Prupe.1G263900 Prunus persica HOM05D007593 ORTHO05D009686 7.5e-58 227.6 167 74.3
Thecc.02G236500 Theobroma cacao HOM05D007593 ORTHO05D009686 6.4e-57 224.6 185 69.2
Manes.01G193300 Manihot esculenta HOM05D007593 ORTHO05D009686 2.4e-56 222.6 180 67.8
Ciclev10032856m.g Citrus clementina HOM05D007593 ORTHO05D009686 3.2e-56 222.2 187 66.8
Atru.chr11.1889 Acer truncatum HOM05D007593 ORTHO05D009686 9.2e-56 220.7 167 71.9
Actinidia01171 Actinidia chinensis HOM05D007593 ORTHO05D009686 9.2e-56 220.7 170 72.9
MD13G1083000 Malus domestica HOM05D007593 ORTHO05D009686 2.1e-55 219.5 161 75.2
FvH4_4g35470 Fragaria vesca HOM05D007593 ORTHO05D009686 4.6e-55 218.4 170 69.4
FAN12G2740 Fragaria x ananassa HOM05D007593 ORTHO05D009686 2.3e-54 216.1 170 68.8
FAN22G1720 Fragaria x ananassa HOM05D007593 ORTHO05D009686 3.0e-54 215.7 170 68.8
PGR102G2137 Punica granatum HOM05D007593 ORTHO05D009686 3.0e-54 215.7 167 70.1
Duzib268G1169 Durio zibethinus HOM05D007593 ORTHO05D009686 3.9e-54 215.3 167 70.1
RcHm_v2.0_Chr4g0445111 Rosa chinensis HOM05D007593 ORTHO05D009686 3.3e-53 212.2 167 67.7
FAN17G2874 Fragaria x ananassa HOM05D007593 ORTHO05D009686 4.3e-53 211.8 167 68.9
Cpa.g.sc5.302 Carica papaya HOM05D007593 ORTHO05D009686 5.6e-53 211.5 167 67.1
TWI75G0370 Tripterygium wilfordii HOM05D007593 ORTHO05D009686 5.6e-53 211.5 167 68.9
FAN12G3835 Fragaria x ananassa HOM05D007593 ORTHO05D009686 7.3e-53 211.1 165 69.1
QL03p066681 Quercus lobata HOM05D007593 ORTHO05D009686 8.1e-52 207.6 208 60.6
Nn3g17072 Nelumbo nucifera HOM05D007593 ORTHO05D009686 1.4e-51 206.8 167 67.7
Aqoxy3G00839 Aquilegia oxysepala HOM05D007593 ORTHO05D009686 2.4e-51 206.1 177 67.2
Sabra08G0144600 Salix brachista HOM05D007593 ORTHO05D009686 5.2e-51 204.9 169 66.9
CiPaw.06G078500 Carya illinoinensis HOM05D007593 ORTHO05D009686 6.8e-51 204.5 167 68.3
COL.COLO4_36239 Corchorus olitorius HOM05D007593 ORTHO05D009686 6.8e-51 204.5 169 66.3
FAN07G2090 Fragaria x ananassa HOM05D007593 ORTHO05D009686 6.8e-51 204.5 161 68.9
AUR62026494 Chenopodium quinoa HOM05D007593 ORTHO05D009686 4.4e-50 201.8 167 67.1
Ca_04684_v3 Cicer arietinum L. HOM05D007593 ORTHO05D009686 7.6e-50 201.1 168 65.5
Hma1.2p1_0289F.1_g114430 Hydrangea macrophylla HOM05D007593 ORTHO05D009686 1.3e-49 200.3 171 66.1
AUR62026300 Chenopodium quinoa HOM05D007593 ORTHO05D009686 2.2e-49 199.5 167 65.3
Potri.008G190600 Populus trichocarpa HOM05D007593 ORTHO05D009686 2.9e-49 199.1 167 67.1
Sabra11G0071900 Salix brachista HOM05D007593 ORTHO05D009686 3.8e-49 198.7 169 65.7
Glyma.02G025300 Glycine max HOM05D007593 ORTHO05D009686 4.9e-49 198.4 167 64.7
TAR629G1096 Trochodendron aralioides HOM05D007593 ORTHO05D009686 6.4e-49 198.0 156 71.8
Sabra11G0071700 Salix brachista HOM05D007593 ORTHO05D009686 8.4e-49 197.6 169 65.1
Glyma.01G039400 Glycine max HOM05D007593 ORTHO05D009686 1.9e-48 196.4 167 64.1
Sc04g0008660 Simmondsia chinensis HOM05D007593 ORTHO05D009686 2.4e-48 196.1 167 63.5
Psat2g115200 Pisum sativum HOM05D007593 ORTHO05D009686 9.2e-48 194.1 166 64.5
BolC5t29606H Brassica oleracea HOM05D007593 ORTHO05D009686 2.7e-47 192.6 169 62.7
Medtr5g037260 Medicago truncatula HOM05D007593 ORTHO05D009686 2.7e-47 192.6 167 62.3
PSO161G0019 Papaver somniferum HOM05D007593 ORTHO05D009686 2.7e-47 192.6 167 62.3
A06p07060 Brassica napus HOM05D007593 ORTHO05D009686 7.8e-47 191.0 170 62.4
EL10Ac6g13115 Beta vulgaris HOM05D007593 ORTHO05D009686 1.3e-46 190.3 196 58.2
BcaC05g24886 Brassica carinata HOM05D007593 ORTHO05D009686 1.3e-46 190.3 169 62.1
VMungo1215G1938 Vigna mungo HOM05D007593 ORTHO05D009686 1.3e-46 190.3 174 61.5
AL1G21190 Arabidopsis lyrata HOM05D007593 ORTHO05D009686 8.7e-46 187.6 167 63.5
Phvul.002G079500 Phaseolus vulgaris HOM05D007593 ORTHO05D009686 1.5e-45 186.8 167 61.7
Lsat_1_v5_gn_8_160680 Lactuca sativa HOM05D007593 ORTHO05D009686 2.5e-45 186.0 167 59.3
BraA06t23921Z Brassica rapa HOM05D007593 ORTHO05D009686 8.1e-44 181.0 170 60.0
Rhsim12G0127800 Rhododendron simsii HOM05D007593 ORTHO05D009686 3.1e-43 179.1 197 55.8
Haze_12082 Corylus avellana HOM05D007593 ORTHO05D009686 4.0e-43 178.7 180 60.0
Cc11_g13810 Coffea canephora HOM05D007593 ORTHO05D009686 5.8e-42 174.9 167 57.5
C05p08550 Brassica napus HOM05D007593 ORTHO05D009686 9.9e-42 174.1 200 52.5
Carub.0001s0986 Capsella rubella HOM05D007593 ORTHO05D009686 9.9e-42 174.1 167 60.5
arahy.Tifrunner.gnm1.ann1.M4LE0B Arachis hypogaea HOM05D007593 ORTHO05D009686 1.1e-40 170.6 167 58.1
AT1G10417 Arabidopsis thaliana HOM05D007593 ORTHO05D009686 6.0e-39 164.9 167 56.9
Eucgr.B03393 Eucalyptus grandis HOM05D007593 ORTHO05D009686 1.7e-38 163.3 131 64.1
HanXRQChr12g0371131 Helianthus annuus HOM05D007593 ORTHO05D009686 5.1e-38 161.8 178 52.8
Nitab4.5_0002542g0050 Nicotiana tabacum HOM05D007593 ORTHO05D009686 6.9e-35 151.4 158 55.1
Thhalv10007877m.g Eutrema salsugineum HOM05D007593 ORTHO05D009686 3.4e-34 149.1 167 55.1
CARHR010560 Cardamine hirsuta HOM05D007593 ORTHO05D009686 4.5e-34 148.7 167 53.3
Gohir.D05G322700 Gossypium hirsutum HOM05D007593 ORTHO05D009686 1.7e-33 146.7 167 51.5
Gorai.009G346400 Gossypium raimondii HOM05D007593 ORTHO05D009686 1.7e-33 146.7 167 51.5
Nitab4.5_0000791g0030 Nicotiana tabacum HOM05D007593 ORTHO05D009686 2.9e-33 146.0 158 51.9
Gohir.A05G320500 Gossypium hirsutum HOM05D007593 ORTHO05D009686 6.7e-30 134.8 167 49.1
Hund25291 Selenicereus undatus HOM05D007593 ORTHO05D009686 8.7e-30 134.4 109 68.8
CAN.G27.56 Capsicum annuum HOM05D007593 ORTHO05D009686 4.0e-27 125.6 142 49.3
CANSAT07G0001 Cannabis sativa HOM05D007593 ORTHO05D009686 6.9e-27 124.8 202 43.6
vmacro16309 Vaccinium macrocarpon HOM05D007593 ORTHO05D009686 2.2e-25 119.8 86 70.9
ECA233G4970 Erigeron canadensis HOM05D007593 ORTHO05D009686 1.2e-23 114.0 179 38.5
BcaC05g24925 Brassica carinata HOM05D007593 ORTHO05D009686 1.8e-22 110.2 167 44.3
Lalb_Chr05g0217431 Lupinus albus HOM05D007593 ORTHO05D009686 1.1e-21 107.5 111 60.4
BcaC05g24887 Brassica carinata HOM05D007593 ORTHO05D009686 1.4e-19 100.5 103 52.4
Lj2g0003805 Lotus japonicus HOM05D007593 ORTHO05D009686 2.4e-19 99.8 167 43.7
Sabra15G0067100 Salix brachista HOM05D007593 ORTHO05D009686 7.4e-13 78.2 73 64.4
Lalb_Chr05g0217441 Lupinus albus HOM05D007593 ORTHO05D009686 9.7e-13 77.8 61 59.0
TPR.G26746 Trifolium pratense HOM05D007593 ORTHO05D009686 2.4e-11 73.2 68 63.2
Sp1g09040 Schrenkiella parvula HOM05D007593 ORTHO05D009686 2.0e-10 70.1 64 64.1
arahy.Tifrunner.gnm1.ann1.YHM9KM Arachis hypogaea HOM05D007593 ORTHO05D009686 5.9e-10 68.6 59 67.8
Mapoly0067s0009 Marchantia polymorpha HOM05D007593 ORTHO05D009686 1.0e-09 67.8 164 29.9
CSS0023539 Camellia sinensis var. sinensis HOM05D007593 ORTHO05D009686 2.5e-08 63.2 156 34.6
AagrBONN_evm.TU.Sc2ySwM_228.4242 Anthoceros agrestis HOM05D007593 ORTHO05D009686 4.2e-08 62.4 164 25.6
Peaxi162Scf00209g00948 Petunia axillaris HOM05D007593 ORTHO05D009686 4.2e-08 62.4 91 45.1
ATR0097G037 Amborella trichopoda HOM05D007593 ORTHO05D009686 3.6e-07 59.3 61 49.2
SMO174G0259 Selaginella moellendorffii HOM05D003005 ORTHO05D021244 7.9e-07 58.2 164 23.8
Zm00001eb223170 Zea mays HOM05D007593 ORTHO05D009686 1.0e-06 57.8 53 47.2
DCAR_031078 Daucus carota HOM05D007593 ORTHO05D009686 5.1e-06 55.5 53 50.9


User provided reference genes

Program Settings