Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01020108001 Vitis vinifera HOM05D007063 ORTHO05D008822 3.6e-139 499.6 247 100.0
QL03p066494 Quercus lobata HOM05D007063 ORTHO05D008822 1.2e-68 265.4 285 51.9
MD13G1082300 Malus domestica HOM05D007063 ORTHO05D008822 5.7e-68 263.1 283 51.6
Prupe.3G121700 Prunus persica HOM05D007063 ORTHO05D008822 5.7e-68 263.1 283 53.0
Cc11_g13730 Coffea canephora HOM05D007063 ORTHO05D008822 2.9e-67 260.8 286 51.0
Dinv31157 Davidia involucrata HOM05D007063 ORTHO05D008822 1.2e-65 255.4 287 53.0
Cfa009057 Carpinus fangiana HOM05D007063 ORTHO05D008822 2.7e-65 254.2 287 51.9
TAR376G0861 Trochodendron aralioides HOM05D007063 ORTHO05D008822 5.9e-65 253.1 283 51.2
COL.COLO4_04706 Corchorus olitorius HOM05D007063 ORTHO05D008822 7.8e-65 252.7 280 51.8
MD16G1081400 Malus domestica HOM05D007063 ORTHO05D008822 7.8e-65 252.7 283 50.5
CiPaw.05G142300 Carya illinoinensis HOM05D007063 ORTHO05D008822 6.6e-64 249.6 285 49.8
Gohir.A03G145400 Gossypium hirsutum HOM05D007063 ORTHO05D008822 6.6e-64 249.6 285 50.9
Gohir.D02G168800 Gossypium hirsutum HOM05D007063 ORTHO05D008822 8.6e-64 249.2 286 50.3
Gorai.005G189200 Gossypium raimondii HOM05D007063 ORTHO05D008822 8.6e-64 249.2 276 51.8
Ciclev10030848m.g Citrus clementina HOM05D007063 ORTHO05D008822 1.5e-63 248.4 285 49.1
Eucgr.J02985 Eucalyptus grandis HOM05D007063 ORTHO05D008822 1.5e-63 248.4 241 54.4
Glyma.08G294400 Glycine max HOM05D007063 ORTHO05D008822 1.9e-63 248.1 284 48.9
Manes.05G095100 Manihot esculenta HOM05D007063 ORTHO05D008822 5.6e-63 246.5 284 49.3
FvH4_4g35550 Fragaria vesca HOM05D007063 ORTHO05D008822 9.5e-63 245.7 282 49.6
TWI36G0287 Tripterygium wilfordii HOM05D007063 ORTHO05D008822 9.5e-63 245.7 275 49.5
RcHm_v2.0_Chr4g0445191 Rosa chinensis HOM05D007063 ORTHO05D008822 3.6e-62 243.8 282 49.6
FAN12G0771 Fragaria x ananassa HOM05D007063 ORTHO05D008822 4.7e-62 243.4 282 48.9
Cpa.g.sc5.294 Carica papaya HOM05D007063 ORTHO05D008822 1.8e-61 241.5 282 47.5
Thecc.02G235700 Theobroma cacao HOM05D007063 ORTHO05D008822 3.1e-61 240.7 285 49.8
Nn5g29409 Nelumbo nucifera HOM05D007063 ORTHO05D008822 8.9e-61 239.2 288 50.3
Potri.010G035700 Populus trichocarpa HOM05D007063 ORTHO05D008822 3.4e-60 237.3 282 47.2
Sabra10G0029200 Salix brachista HOM05D007063 ORTHO05D008822 1.3e-59 235.3 283 48.1
Oeu057168.1 Olea europaea HOM05D007063 ORTHO05D008822 2.9e-59 234.2 274 48.9
VMungo0251G0088 Vigna mungo HOM05D007063 ORTHO05D008822 4.9e-59 233.4 284 46.1
Nitab4.5_0000408g0040 Nicotiana tabacum HOM05D007063 ORTHO05D008822 6.4e-59 233.0 279 47.0
Haze_12090 Corylus avellana HOM05D007063 ORTHO05D008822 1.4e-58 231.9 241 54.8
PGR119G2491 Punica granatum HOM05D007063 ORTHO05D008822 1.4e-58 231.9 284 45.1
Phvul.003G071600 Phaseolus vulgaris HOM05D007063 ORTHO05D008822 1.2e-57 228.8 284 45.4
PGSC0003DMG401022625 Solanum tuberosum HOM05D007063 ORTHO05D008822 1.7e-56 224.9 279 45.5
Migut.L01363 Erythranthe guttata HOM05D007063 ORTHO05D008822 6.6e-56 223.0 260 46.5
FAN17G0779 Fragaria x ananassa HOM05D007063 ORTHO05D008822 1.5e-55 221.9 235 51.5
FAN22G1231 Fragaria x ananassa HOM05D007063 ORTHO05D008822 1.5e-55 221.9 235 51.5
FAN07G2566 Fragaria x ananassa HOM05D007063 ORTHO05D008822 2.5e-55 221.1 235 51.1
DCAR_026582 Daucus carota HOM05D007063 ORTHO05D008822 3.3e-55 220.7 285 43.5
Duzib251G0007 Durio zibethinus HOM05D007063 ORTHO05D008822 2.1e-54 218.0 276 47.5
Sc04g0008550 Simmondsia chinensis HOM05D007063 ORTHO05D008822 2.8e-54 217.6 286 45.8
MELO3C010126.2 Cucumis melo HOM05D007063 ORTHO05D008822 3.6e-54 217.2 284 43.7
Gohir.A08G253850 Gossypium hirsutum HOM05D007063 ORTHO05D008822 3.6e-54 217.2 273 47.3
Sopen05g002660 Solanum pennellii HOM05D007063 ORTHO05D008822 3.6e-54 217.2 273 43.2
CsaV3_1G045100 Cucumis sativus L. HOM05D007063 ORTHO05D008822 8.1e-54 216.1 283 44.5
EL10Ac6g13122 Beta vulgaris HOM05D007063 ORTHO05D008822 2.3e-53 214.5 282 45.0
RhsimUnG0180400 Rhododendron simsii HOM05D007063 ORTHO05D008822 5.2e-53 213.4 284 45.1
RhsimUnG0211600 Rhododendron simsii HOM05D007063 ORTHO05D008822 5.2e-53 213.4 284 45.1
PSO675G2478 Papaver somniferum HOM05D007063 ORTHO05D008822 1.2e-52 212.2 290 44.8
PSO541G5427 Papaver somniferum HOM05D007063 ORTHO05D008822 5.8e-52 209.9 292 44.9
Nitab4.5_0001726g0080 Nicotiana tabacum HOM05D007063 ORTHO05D008822 9.8e-52 209.1 229 48.0
HanXRQChr12g0371111 Helianthus annuus HOM05D007063 ORTHO05D008822 2.2e-51 208.0 283 43.8
Lj9C441T4 Lonicera japonica HOM05D007063 ORTHO05D008822 4.9e-51 206.8 213 55.4
CAN.G27.48 Capsicum annuum HOM05D007063 ORTHO05D008822 6.4e-51 206.5 272 43.4
SGA_v2.0_scaffold166G38300 Striga asiatica HOM05D007063 ORTHO05D008822 6.4e-51 206.5 235 47.7
Sed0009977 Sechium edule HOM05D007063 ORTHO05D008822 1.1e-50 205.7 242 47.1
THA.LOC104822081 Tarenaya hassleriana HOM05D007063 ORTHO05D008822 1.4e-50 205.3 282 45.4
Ah.02g131890 Amaranthus hybridus HOM05D007063 ORTHO05D008822 1.9e-50 204.9 283 43.5
AUR62026294 Chenopodium quinoa HOM05D007063 ORTHO05D008822 1.9e-50 204.9 279 43.4
Aa31LG1G18980 Aethionema arabicum HOM05D000150 ORTHO05D000108 9.2e-50 202.6 249 45.8
Sp1g04490 Schrenkiella parvula HOM05D007063 ORTHO05D008822 2.1e-49 201.4 236 47.0
Thhalv10010012m.g Eutrema salsugineum HOM05D007063 ORTHO05D008822 2.7e-49 201.1 283 42.8
C05p04030 Brassica napus HOM05D007063 ORTHO05D008822 3.5e-49 200.7 242 47.5
Lj4g0004753 Lotus japonicus HOM05D007063 ORTHO05D008822 4.6e-49 200.3 277 44.0
AL1G15570 Arabidopsis lyrata HOM05D007063 ORTHO05D008822 6.0e-49 199.9 282 43.3
BcaC05g24351 Brassica carinata HOM05D007063 ORTHO05D008822 6.0e-49 199.9 242 47.1
BolC5t29181H Brassica oleracea HOM05D007063 ORTHO05D008822 7.8e-49 199.5 242 47.1
AT1G05670 Arabidopsis thaliana HOM05D007063 ORTHO05D008822 1.0e-48 199.1 282 42.9
BcaC06g35638 Brassica carinata HOM05D007063 ORTHO05D008822 1.0e-48 199.1 242 44.2
C07p12680 Brassica napus HOM05D007063 ORTHO05D008822 1.0e-48 199.1 242 44.2
AUR62026486 Chenopodium quinoa HOM05D007063 ORTHO05D008822 1.7e-48 198.4 272 43.8
TPR.G10111 Trifolium pratense HOM05D007063 ORTHO05D008822 1.7e-48 198.4 248 43.1
A10p04430 Brassica napus HOM05D007063 ORTHO05D008822 2.3e-48 198.0 242 46.3
SHI15635 Sapria himalayana HOM05D007063 ORTHO05D008822 2.3e-48 198.0 242 44.6
Carub.0001s0501 Capsella rubella HOM05D007063 ORTHO05D008822 3.0e-48 197.6 282 43.3
Gorai.010G000600 Gossypium raimondii HOM05D007063 ORTHO05D008822 3.0e-48 197.6 234 48.3
BraA10t42710Z Brassica rapa HOM05D007063 ORTHO05D008822 5.1e-48 196.8 242 45.9
Psat4g129080 Pisum sativum HOM05D007063 ORTHO05D008822 8.6e-48 196.1 246 43.1
BcaB02g06831 Brassica carinata HOM05D007063 ORTHO05D008822 7.3e-47 193.0 198 51.0
CARHR005190 Cardamine hirsuta HOM05D007063 ORTHO05D008822 7.3e-47 193.0 282 42.6
Ca_22836_v3 Cicer arietinum L. HOM05D007063 ORTHO05D008822 1.6e-46 191.8 240 42.9
Ca_25037_v3 Cicer arietinum L. HOM05D007063 ORTHO05D008822 3.6e-46 190.7 240 42.5
Medtr8g105170 Medicago truncatula HOM05D007063 ORTHO05D008822 4.0e-45 187.2 251 41.4
Gorai.013G000300 Gossypium raimondii HOM05D007063 ORTHO05D008822 2.4e-42 177.9 328 37.5
MBI16_g31483_MAGBIO Magnolia biondii HOM05D007063 ORTHO05D008822 9.2e-42 176.0 262 38.9
Gohir.D13G000560 Gossypium hirsutum HOM05D007063 ORTHO05D008822 2.1e-41 174.9 286 40.6
ECA233G4853 Erigeron canadensis HOM05D007063 ORTHO05D008822 6.0e-41 173.3 256 38.7
CDE06G2628 Ceratophyllum demersum HOM05D007063 ORTHO05D008822 3.6e-38 164.1 226 40.3
C07p01560 Brassica napus HOM05D007063 ORTHO05D008822 4.0e-37 160.6 135 57.8
TPR.G21860 Trifolium pratense HOM05D007063 ORTHO05D008822 6.9e-37 159.8 232 41.8
Atru.chr11.1883 Acer truncatum HOM05D007063 ORTHO05D008822 1.2e-36 159.1 115 69.6
ATR0751G129 Amborella trichopoda HOM05D007063 ORTHO05D008822 2.1e-33 148.3 199 44.7
Actinidia19847 Actinidia chinensis HOM05D007063 ORTHO05D008822 1.0e-32 146.0 149 53.0
Lalb_Chr05g0230141 Lupinus albus HOM05D007063 ORTHO05D008822 1.4e-29 135.6 240 35.8
HPP92_019906 Vanilla planifolia HOM05D007063 ORTHO05D008822 4.6e-25 120.6 242 33.5
BolC3t18582H Brassica oleracea HOM05D007063 ORTHO05D008822 6.0e-25 120.2 83 67.5
BcaC05g24348 Brassica carinata HOM05D007063 ORTHO05D008822 6.2e-22 110.2 82 65.9
C03p63300 Brassica napus HOM05D000336 ORTHO05D002301 2.4e-21 108.2 89 60.7
SEGI_23973 Sequoiadendron giganteum HOM05D007063 ORTHO05D008822 6.4e-19 100.1 181 34.8
Glyma.18G128532 Glycine max HOM05D007063 ORTHO05D008822 3.9e-16 90.9 203 32.5
vmacro22128 Vaccinium macrocarpon HOM05D007063 ORTHO05D008822 2.6e-12 78.2 104 45.2
Gorai.002G000500 Gossypium raimondii HOM05D007063 ORTHO05D008822 5.8e-12 77.0 140 35.0
Atru.BG.286.p Acer truncatum HOM05D007063 ORTHO05D008822 1.7e-11 75.5 82 46.3
MELO3C025970.2 Cucumis melo HOM05D006931 ORTHO05D008782 3.2e-10 71.2 190 28.4
Aqoxy3G00599 Aquilegia oxysepala HOM05D007063 ORTHO05D008822 4.2e-10 70.9 135 34.8
SEGI_12196 Sequoiadendron giganteum HOM05D006931 ORTHO05D008782 7.4e-07 60.1 186 26.9
Thecc.01G192500 Theobroma cacao HOM05D006931 ORTHO05D008782 2.1e-06 58.5 193 24.9
HanXRQChr17g0537601 Helianthus annuus HOM05D006931 ORTHO05D008782 2.8e-06 58.2 202 24.8
RcHm_v2.0_Chr2g0156201 Rosa chinensis HOM05D006931 ORTHO05D008782 2.8e-06 58.2 186 25.8


User provided reference genes

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