Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01020080001 Vitis vinifera HOM05D007453 ORTHO05D009223 2.0e-98 362.5 188 100.0
TWI75G0120 Tripterygium wilfordii HOM05D007453 ORTHO05D009223 2.1e-55 219.5 199 61.8
Ciclev10032837m.g Citrus clementina HOM05D007453 ORTHO05D009223 4.0e-54 215.3 195 64.1
Gohir.D05G323400 Gossypium hirsutum HOM05D007453 ORTHO05D009223 7.5e-53 211.1 196 62.8
Ca_07373_v3 Cicer arietinum L. HOM05D007453 ORTHO05D009223 8.3e-52 207.6 194 61.9
Lalb_Chr10g0097941 Lupinus albus HOM05D007453 ORTHO05D009223 1.8e-51 206.5 194 60.3
Atru.chr11.1862 Acer truncatum HOM05D007453 ORTHO05D009223 4.1e-51 205.3 189 61.4
TAR481G0010 Trochodendron aralioides HOM05D007453 ORTHO05D009223 4.1e-51 205.3 191 63.9
Dinv24949 Davidia involucrata HOM05D007453 ORTHO05D009223 9.2e-51 204.1 193 61.1
Psat2g125360 Pisum sativum HOM05D007453 ORTHO05D009223 1.2e-50 203.8 194 59.8
Cfa009043 Carpinus fangiana HOM05D007453 ORTHO05D009223 1.6e-50 203.4 196 59.2
CsaV3_5G032280 Cucumis sativus L. HOM05D007453 ORTHO05D009223 4.6e-50 201.8 196 59.7
VMungo1215G3437 Vigna mungo HOM05D007453 ORTHO05D009223 4.6e-50 201.8 196 59.7
Gorai.009G347100 Gossypium raimondii HOM05D007453 ORTHO05D009223 5.9e-50 201.4 196 60.2
Duzib248G0401 Durio zibethinus HOM05D007453 ORTHO05D009223 7.8e-50 201.1 197 60.9
PGR119G1700 Punica granatum HOM05D007453 ORTHO05D009223 2.3e-49 199.5 203 61.6
TPR.G29466 Trifolium pratense HOM05D007453 ORTHO05D009223 2.3e-49 199.5 194 58.2
Medtr5g038225 Medicago truncatula HOM05D007453 ORTHO05D009223 3.0e-49 199.1 194 59.3
Lj2g0026857 Lotus japonicus HOM05D007453 ORTHO05D009223 3.9e-49 198.7 194 59.3
QL03p065949 Quercus lobata HOM05D007453 ORTHO05D009223 3.9e-49 198.7 203 57.6
CiPaw.05G140500 Carya illinoinensis HOM05D007453 ORTHO05D009223 1.1e-48 197.2 198 57.6
Phvul.002G067300 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 1.1e-48 197.2 194 58.2
Prupe.1G267100 Prunus persica HOM05D007453 ORTHO05D009223 1.1e-48 197.2 202 58.9
MELO3C012060.2 Cucumis melo HOM05D007453 ORTHO05D009223 1.5e-48 196.8 193 58.0
Thecc.02G232500 Theobroma cacao HOM05D007453 ORTHO05D009223 1.9e-48 196.4 196 60.7
Glyma.01G041651 Glycine max HOM05D007453 ORTHO05D009223 3.3e-48 195.7 195 57.9
Manes.05G095900 Manihot esculenta HOM05D007453 ORTHO05D009223 1.2e-47 193.7 195 57.9
arahy.Tifrunner.gnm1.ann1.QA8CWD Arachis hypogaea HOM05D007453 ORTHO05D009223 2.8e-47 192.6 199 56.8
COL.COLO4_36183 Corchorus olitorius HOM05D007453 ORTHO05D009223 3.6e-47 192.2 198 59.1
Duzib248G0483 Durio zibethinus HOM05D007453 ORTHO05D009223 8.0e-47 191.0 196 57.1
CSS0012607 Camellia sinensis var. sinensis HOM05D007453 ORTHO05D009223 1.8e-46 189.9 193 57.0
arahy.Tifrunner.gnm1.ann1.D3ZUUX Arachis hypogaea HOM05D007453 ORTHO05D009223 4.0e-46 188.7 199 55.8
Haze_12073 Corylus avellana HOM05D007453 ORTHO05D009223 1.5e-45 186.8 225 51.1
Actinidia08212 Actinidia chinensis HOM05D007453 ORTHO05D009223 2.0e-45 186.4 199 58.3
Actinidia19855 Actinidia chinensis HOM05D007453 ORTHO05D009223 9.8e-45 184.1 203 58.1
Duzib251G0796 Durio zibethinus HOM05D007453 ORTHO05D009223 1.3e-44 183.7 197 56.3
ClCG05G024650 Citrullus lanatus HOM05D007453 ORTHO05D009223 1.9e-43 179.9 186 55.9
Eucgr.B03407 Eucalyptus grandis HOM05D007453 ORTHO05D009223 1.9e-43 179.9 199 55.3
Sed0013591 Sechium edule HOM05D007453 ORTHO05D009223 4.1e-43 178.7 204 53.9
MD13G1079700 Malus domestica HOM05D007453 ORTHO05D009223 7.0e-43 177.9 208 52.9
Cpa.g.sc1379.2 Carica papaya HOM05D007453 ORTHO05D009223 1.2e-42 177.2 203 52.2
HanXRQChr17g0544601 Helianthus annuus HOM05D007453 ORTHO05D009223 1.2e-42 177.2 206 54.9
Hund05917 Selenicereus undatus HOM05D007453 ORTHO05D009223 1.2e-42 177.2 191 53.9
vmacro16323 Vaccinium macrocarpon HOM05D007453 ORTHO05D009223 1.6e-42 176.8 198 55.6
Gohir.A05G321200 Gossypium hirsutum HOM05D007453 ORTHO05D009223 1.3e-41 173.7 146 65.8
MSTRG.13399 Avicennia marina HOM05D007453 ORTHO05D009223 1.7e-41 173.3 209 50.7
Sabra10G0030300 Salix brachista HOM05D007453 ORTHO05D009223 3.0e-41 172.6 152 65.1
Sp1g21730 Schrenkiella parvula HOM05D007453 ORTHO05D009223 3.9e-41 172.2 212 50.5
FAN07G0059 Fragaria x ananassa HOM05D007453 ORTHO05D009223 1.1e-40 170.6 203 51.2
Potri.010G034500 Populus trichocarpa HOM05D007453 ORTHO05D009223 3.3e-40 169.1 149 63.1
FAN22G0202 Fragaria x ananassa HOM05D007453 ORTHO05D009223 4.3e-40 168.7 203 51.7
Glyma.02G022351 Glycine max HOM05D007453 ORTHO05D009223 5.6e-40 168.3 144 63.2
EL10Ac6g13141 Beta vulgaris HOM05D007453 ORTHO05D009223 9.5e-40 167.5 204 52.0
FvH4_4g32080 Fragaria vesca HOM05D007453 ORTHO05D009223 1.2e-39 167.2 203 50.2
DCAR_031058 Daucus carota HOM05D007453 ORTHO05D009223 1.6e-39 166.8 203 54.7
Aa31LG7G8100 Aethionema arabicum HOM05D007453 ORTHO05D009223 2.8e-39 166.0 216 50.0
AL1G38440 Arabidopsis lyrata HOM05D007453 ORTHO05D009223 4.7e-39 165.2 206 49.5
C07p19880 Brassica napus HOM05D007453 ORTHO05D009223 8.1e-39 164.5 204 49.5
BolC7t42507H Brassica oleracea HOM05D007453 ORTHO05D009223 8.1e-39 164.5 204 49.5
Phvul.002G077900 Phaseolus vulgaris HOM05D007453 ORTHO05D009223 8.1e-39 164.5 159 57.2
Rhsim12G0129600 Rhododendron simsii HOM05D007453 ORTHO05D009223 1.1e-38 164.1 249 46.6
RcHm_v2.0_Chr4g0440771 Rosa chinensis HOM05D007453 ORTHO05D009223 1.4e-38 163.7 206 50.0
BcaB03g14102 Brassica carinata HOM05D007453 ORTHO05D009223 1.8e-38 163.3 208 48.6
A07p13280 Brassica napus HOM05D007453 ORTHO05D009223 5.2e-38 161.8 192 52.1
AT1G27050 Arabidopsis thaliana HOM05D007453 ORTHO05D009223 6.8e-38 161.4 209 45.5
BcaC06g35095 Brassica carinata HOM05D007453 ORTHO05D009223 6.8e-38 161.4 204 48.5
Thhalv10008803m.g Eutrema salsugineum HOM05D007453 ORTHO05D009223 6.8e-38 161.4 205 49.3
BraA07t29098Z Brassica rapa HOM05D007453 ORTHO05D009223 2.0e-37 159.8 194 51.0
THA.LOC104822931 Tarenaya hassleriana HOM05D007453 ORTHO05D009223 3.4e-37 159.1 204 50.0
CARHR024860 Cardamine hirsuta HOM05D007453 ORTHO05D009223 5.8e-37 158.3 210 46.7
Cc11_g13560 Coffea canephora HOM05D007453 ORTHO05D009223 5.8e-37 158.3 224 48.7
MSTRG.2362 Avicennia marina HOM05D007453 ORTHO05D009223 7.5e-37 157.9 210 46.2
MBI01_g12858_MAGBIO Magnolia biondii HOM05D007453 ORTHO05D009223 9.9e-37 157.5 193 48.7
ECA246G4987 Erigeron canadensis HOM05D007453 ORTHO05D009223 1.3e-36 157.1 214 47.7
Solyc05g006960.3 Solanum lycopersicum HOM05D007453 ORTHO05D009223 2.9e-36 156.0 206 48.5
Sopen05g002920 Solanum pennellii HOM05D007453 ORTHO05D009223 2.9e-36 156.0 206 48.5
CiPaw.06G080300 Carya illinoinensis HOM05D007453 ORTHO05D009223 6.4e-36 154.8 160 56.9
PSO591G0176 Papaver somniferum HOM05D007453 ORTHO05D009223 6.4e-36 154.8 204 48.5
PGSC0003DMG400017639 Solanum tuberosum HOM05D007453 ORTHO05D009223 6.4e-36 154.8 206 48.1
PSO832G2667 Papaver somniferum HOM05D007453 ORTHO05D009223 1.4e-35 153.7 200 48.0
Sc11g0001650 Simmondsia chinensis HOM05D007453 ORTHO05D009223 2.4e-35 152.9 196 48.5
Migut.E00119 Erythranthe guttata HOM05D007453 ORTHO05D009223 3.2e-35 152.5 217 45.2
Nitab4.5_0000679g0070 Nicotiana tabacum HOM05D007453 ORTHO05D009223 7.1e-35 151.4 230 44.3
SalBow8G2121 Salvia bowleyana HOM05D007453 ORTHO05D009223 7.1e-35 151.4 209 44.0
SGA_v2.0_scaffold87G26973 Striga asiatica HOM05D007453 ORTHO05D009223 7.1e-35 151.4 209 46.9
Lsat_1_v5_gn_3_49860 Lactuca sativa HOM05D007453 ORTHO05D009223 2.1e-34 149.8 166 55.4
unitig_62.g23683 Utricularia gibba HOM05D007453 ORTHO05D009223 6.0e-34 148.3 199 47.7
FAN12G0628 Fragaria x ananassa HOM05D007453 ORTHO05D009223 4.3e-32 142.1 203 46.3
Carub.0001s2392 Capsella rubella HOM05D007453 ORTHO05D009223 1.6e-31 140.2 206 43.2
Nitab4.5_0002969g0020 Nicotiana tabacum HOM05D007453 ORTHO05D009223 1.2e-29 134.0 226 42.5
Aqoxy3G03257 Aquilegia oxysepala HOM05D007453 ORTHO05D009223 2.0e-29 133.3 141 55.3
Lj6C173T12 Lonicera japonica HOM05D007453 ORTHO05D009223 2.6e-29 132.9 119 61.3
CDE05G3569 Ceratophyllum demersum HOM05D007453 ORTHO05D009223 8.4e-28 127.9 196 43.4
ATR0665G072 Amborella trichopoda HOM05D007453 ORTHO05D009223 3.5e-26 122.5 194 43.3
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 1.3e-25 120.6 125 57.6
HPP92_001648 Vanilla planifolia HOM05D007453 ORTHO05D009223 1.1e-24 117.5 187 42.2
AUR62026264 Chenopodium quinoa HOM05D007453 ORTHO05D009223 8.1e-23 111.3 115 58.3
Dinv40682 Davidia involucrata HOM05D007453 ORTHO05D009223 4.0e-22 109.0 111 56.8
Peaxi162Scf00209g00516 Petunia axillaris HOM05D007453 ORTHO05D009223 5.2e-22 108.6 156 48.7
A07p13630 Brassica napus HOM05D007453 ORTHO05D009223 1.2e-18 97.4 118 47.5
HPP92_001630 Vanilla planifolia HOM05D007453 ORTHO05D009223 5.3e-14 82.0 119 45.4
Nn4g23028 Nelumbo nucifera HOM05D007453 ORTHO05D009223 9.3e-11 71.2 79 55.7
Lj6C173T11 Lonicera japonica HOM05D007453 ORTHO05D009223 1.4e-06 57.4 80 41.2


User provided reference genes

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