Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01020052001 Vitis vinifera HOM05D000751 ORTHO05D051626 8.8e-57 223.4 113 100.0
GSVIVG01034908001 Vitis vinifera HOM05D000751 ORTHO05D051626 4.4e-56 221.1 113 99.1
GSVIVG01027083001 Vitis vinifera HOM05D000751 ORTHO05D000889 6.1e-26 120.9 77 76.6
Prupe.2G186200 Prunus persica HOM05D000751 ORTHO05D000889 9.8e-16 87.0 72 56.9
Glyma.07G056700 Glycine max HOM05D000751 ORTHO05D000889 6.4e-15 84.3 80 52.5
Dinv32574 Davidia involucrata HOM05D000751 ORTHO05D000889 8.3e-15 84.0 75 50.7
MD01G1079200 Malus domestica HOM05D000751 ORTHO05D000889 1.1e-14 83.6 73 56.2
Thecc.01G344300 Theobroma cacao HOM05D000751 ORTHO05D000889 1.9e-14 82.8 75 52.0
Glyma.16G025800 Glycine max HOM05D000751 ORTHO05D000889 2.4e-14 82.4 80 52.5
Cfa003812 Carpinus fangiana HOM05D000751 ORTHO05D000889 4.1e-14 81.6 84 45.2
Actinidia28502 Actinidia chinensis HOM05D000751 ORTHO05D000889 5.4e-14 81.3 75 48.0
CSS0016436 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D000889 5.4e-14 81.3 75 49.3
CSS0024343 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D000889 1.2e-13 80.1 75 48.0
ClCG09G009590 Citrullus lanatus HOM05D000751 ORTHO05D000889 1.2e-13 80.1 79 49.4
Eucgr.D02366 Eucalyptus grandis HOM05D000751 ORTHO05D000889 1.6e-13 79.7 68 55.9
Cpa.g.sc273.3 Carica papaya HOM05D000751 ORTHO05D000889 2.7e-13 79.0 75 53.3
MELO3C023722.2 Cucumis melo HOM05D000751 ORTHO05D000889 3.5e-13 78.6 79 48.1
Duzib138G1949 Durio zibethinus HOM05D000751 ORTHO05D000889 3.5e-13 78.6 75 48.0
Haze_15642 Corylus avellana HOM05D000751 ORTHO05D000889 6.0e-13 77.8 84 44.0
MD07G1148100 Malus domestica HOM05D000751 ORTHO05D000889 6.0e-13 77.8 73 50.7
FAN06G2986 Fragaria x ananassa HOM05D000751 ORTHO05D000889 7.8e-13 77.4 74 50.0
CiPaw.02G039700 Carya illinoinensis HOM05D000751 ORTHO05D000889 1.0e-12 77.0 77 45.5
FAN10G1631 Fragaria x ananassa HOM05D000751 ORTHO05D000889 1.0e-12 77.0 75 49.3
FAN10G3268 Fragaria x ananassa HOM05D000751 ORTHO05D000889 1.0e-12 77.0 75 49.3
Lalb_Chr04g0254471 Lupinus albus HOM05D000751 ORTHO05D000889 1.0e-12 77.0 75 48.0
Atru.chr5.651 Acer truncatum HOM05D000751 ORTHO05D000889 2.3e-12 75.9 71 49.3
TWI59G1107 Tripterygium wilfordii HOM05D000751 ORTHO05D000889 2.3e-12 75.9 73 47.9
vmacro13151 Vaccinium macrocarpon HOM05D000751 ORTHO05D000889 2.3e-12 75.9 73 49.3
FAN01G0360 Fragaria x ananassa HOM05D000751 ORTHO05D000889 3.0e-12 75.5 74 48.6
Nn3g19032 Nelumbo nucifera HOM05D000751 ORTHO05D000889 3.0e-12 75.5 75 49.3
Psat4g214480 Pisum sativum HOM05D000751 ORTHO05D000889 3.0e-12 75.5 74 51.4
QL04p056643 Quercus lobata HOM05D000751 ORTHO05D000889 3.0e-12 75.5 82 43.9
Gohir.A07G138300 Gossypium hirsutum HOM05D000751 ORTHO05D000889 3.9e-12 75.1 65 55.4
VMungo0540G1551 Vigna mungo HOM05D000751 ORTHO05D000889 3.9e-12 75.1 75 45.3
Cc02_g39220 Coffea canephora HOM05D000751 ORTHO05D000889 5.0e-12 74.7 75 46.7
FAN03G1458 Fragaria x ananassa HOM05D000751 ORTHO05D000889 5.0e-12 74.7 74 48.6
Nitab4.5_0001829g0050 Nicotiana tabacum HOM05D000751 ORTHO05D000889 5.0e-12 74.7 80 45.0
Manes.01G247200 Manihot esculenta HOM05D000751 ORTHO05D000889 6.6e-12 74.3 79 46.8
arahy.Tifrunner.gnm1.ann1.2FK0GQ Arachis hypogaea HOM05D000751 ORTHO05D000889 8.6e-12 73.9 73 47.9
arahy.Tifrunner.gnm1.ann1.8G1IGY Arachis hypogaea HOM05D000751 ORTHO05D000889 8.6e-12 73.9 73 47.9
Dinv18736 Davidia involucrata HOM05D000751 ORTHO05D000889 8.6e-12 73.9 82 42.7
Gorai.001G155400 Gossypium raimondii HOM05D000751 ORTHO05D000889 8.6e-12 73.9 65 53.8
Phvul.010G112700 Phaseolus vulgaris HOM05D000751 ORTHO05D000889 8.6e-12 73.9 80 48.8
TPR.G31614 Trifolium pratense HOM05D000751 ORTHO05D000889 8.6e-12 73.9 74 50.0
FvH4_7g16250 Fragaria vesca HOM05D000751 ORTHO05D000889 1.5e-11 73.2 74 47.3
FAN06G1708 Fragaria x ananassa HOM05D000751 ORTHO05D000889 1.5e-11 73.2 74 47.3
TAR374G0274 Trochodendron aralioides HOM05D000751 ORTHO05D000889 1.5e-11 73.2 73 52.1
Sed0006751 Sechium edule HOM05D000751 ORTHO05D000889 1.9e-11 72.8 77 49.4
Ca_26355_v3 Cicer arietinum L. HOM05D000751 ORTHO05D000889 2.5e-11 72.4 74 48.6
Ca_30811_v3 Cicer arietinum L. HOM05D000751 ORTHO05D000889 2.5e-11 72.4 74 48.6
RcHm_v2.0_Chr1g0359271 Rosa chinensis HOM05D000751 ORTHO05D000889 2.5e-11 72.4 74 48.6
Ciclev10023855m.g Citrus clementina HOM05D000751 ORTHO05D000889 3.3e-11 72.0 73 47.9
Medtr8g027790 Medicago truncatula HOM05D000751 ORTHO05D000889 3.3e-11 72.0 74 48.6
CAN.G72.20 Capsicum annuum HOM05D000751 ORTHO05D000889 4.3e-11 71.6 68 50.0
Potri.002G169732 Populus trichocarpa HOM05D000751 ORTHO05D000889 4.3e-11 71.6 77 50.6
Gohir.D07G143400 Gossypium hirsutum HOM05D000751 ORTHO05D000889 5.6e-11 71.2 65 52.3
Actinidia10121 Actinidia chinensis HOM05D000751 ORTHO05D000889 7.3e-11 70.9 84 46.4
TAR625G0851 Trochodendron aralioides HOM05D000751 ORTHO05D025780 9.5e-11 70.5 93 43.0
Lj9A596T52 Lonicera japonica HOM05D000751 ORTHO05D000889 1.2e-10 70.1 79 50.6
Lalb_Chr17g0342511 Lupinus albus HOM05D000751 ORTHO05D000889 1.2e-10 70.1 79 45.6
Sed0027487 Sechium edule HOM05D000751 ORTHO05D000889 1.2e-10 70.1 71 49.3
Lj3g0026226 Lotus japonicus HOM05D000751 ORTHO05D000889 1.6e-10 69.7 77 45.5
Peaxi162Scf00218g00063 Petunia axillaris HOM05D000751 ORTHO05D000889 2.8e-10 68.9 82 45.1
Solyc10g009490.2 Solanum lycopersicum HOM05D000751 ORTHO05D000889 3.6e-10 68.6 75 48.0
Sopen10g005300 Solanum pennellii HOM05D000751 ORTHO05D000889 3.6e-10 68.6 75 48.0
TAR369G0952 Trochodendron aralioides HOM05D000751 ORTHO05D025780 3.6e-10 68.6 72 48.6
Nn1g01852 Nelumbo nucifera HOM05D000751 ORTHO05D000889 4.7e-10 68.2 75 42.7
Phvul.006G112100 Phaseolus vulgaris HOM05D000751 ORTHO05D000889 4.7e-10 68.2 79 41.8
TAR375G0079 Trochodendron aralioides HOM05D000751 ORTHO05D025780 4.7e-10 68.2 72 48.6
Gohir.D11G101200 Gossypium hirsutum HOM05D000751 ORTHO05D000889 6.2e-10 67.8 73 46.6
Gorai.007G107700 Gossypium raimondii HOM05D000751 ORTHO05D000889 6.2e-10 67.8 73 46.6
Hma1.2p1_0295F.1_g116580 Hydrangea macrophylla HOM05D000751 ORTHO05D000889 6.2e-10 67.8 75 45.3
DCAR_008660 Daucus carota HOM05D000751 ORTHO05D000889 1.1e-09 67.0 64 51.6
Gohir.A12G111700 Gossypium hirsutum HOM05D000751 ORTHO05D000889 1.1e-09 67.0 75 46.7
Gohir.D12G115000 Gossypium hirsutum HOM05D000751 ORTHO05D000889 1.1e-09 67.0 75 46.7
Gorai.008G124600 Gossypium raimondii HOM05D000751 ORTHO05D000889 1.1e-09 67.0 75 46.7
Potri.014G097600 Populus trichocarpa HOM05D000751 ORTHO05D000889 1.1e-09 67.0 79 45.6
TAR352G0005 Trochodendron aralioides HOM05D000751 ORTHO05D025780 1.1e-09 67.0 72 48.6
CAN.G986.20 Capsicum annuum HOM05D000751 ORTHO05D000889 1.4e-09 66.6 68 47.1
Peaxi162Scf00786g00440 Petunia axillaris HOM05D000751 ORTHO05D000889 1.4e-09 66.6 62 48.4
CSS0040691 Camellia sinensis var. sinensis HOM05D000751 ORTHO05D000889 1.8e-09 66.2 76 46.1
Gohir.D08G044500 Gossypium hirsutum HOM05D000751 ORTHO05D000889 4.0e-09 65.1 75 45.3
Gorai.004G043500 Gossypium raimondii HOM05D000751 ORTHO05D000889 4.0e-09 65.1 75 45.3
PGR031G2844 Punica granatum HOM05D000751 ORTHO05D000889 5.2e-09 64.7 78 44.9
Rhsim07G0005100 Rhododendron simsii HOM05D000751 ORTHO05D000889 5.2e-09 64.7 84 42.9
GSVIVG01028706001 Vitis vinifera HOM05D000751 ORTHO05D000889 5.2e-09 64.7 69 43.5
AUR62023477 Chenopodium quinoa HOM05D000751 ORTHO05D000889 6.8e-09 64.3 87 39.1
MBI16_g18209_MAGBIO Magnolia biondii HOM05D000751 ORTHO05D000889 6.8e-09 64.3 73 45.2
Gohir.A08G033900 Gossypium hirsutum HOM05D000751 ORTHO05D000889 8.9e-09 63.9 75 44.0
vmacro12683 Vaccinium macrocarpon HOM05D000751 ORTHO05D000889 8.9e-09 63.9 73 41.1
Hund27209 Selenicereus undatus HOM05D000751 ORTHO05D000889 1.5e-08 63.2 64 50.0
Rhsim01G0171600 Rhododendron simsii HOM05D000751 ORTHO05D000889 2.0e-08 62.8 79 39.2
Solyc01g095730.4 Solanum lycopersicum HOM05D000751 ORTHO05D000889 2.0e-08 62.8 71 45.1
Sopen01g039480 Solanum pennellii HOM05D000751 ORTHO05D000889 2.0e-08 62.8 71 45.1
VMungo0331G1997 Vigna mungo HOM05D000751 ORTHO05D000889 2.0e-08 62.8 80 46.2
Lsat_1_v5_gn_4_33301 Lactuca sativa HOM05D000751 ORTHO05D000889 3.4e-08 62.0 66 54.5
DCAR_006969 Daucus carota HOM05D000751 ORTHO05D000889 7.5e-08 60.8 75 38.7
Lsat_1_v5_gn_4_33260 Lactuca sativa HOM05D000751 ORTHO05D000889 7.5e-08 60.8 61 54.1
Nitab4.5_0008279g0040 Nicotiana tabacum HOM05D000751 ORTHO05D000889 7.5e-08 60.8 60 46.7
ECA236G0082 Erigeron canadensis HOM05D000751 ORTHO05D000889 9.9e-08 60.5 72 44.4
Migut.N01553 Erythranthe guttata HOM05D000751 ORTHO05D000889 9.9e-08 60.5 77 42.9
Oeu026814.1 Olea europaea HOM05D000751 ORTHO05D000889 9.9e-08 60.5 62 43.5
Lalb_Chr10g0100451 Lupinus albus HOM05D000751 ORTHO05D025780 1.3e-07 60.1 58 50.0
THA.LOC104817345 Tarenaya hassleriana HOM05D000751 ORTHO05D000889 1.7e-07 59.7 77 39.0
Lalb_Chr18g0044381 Lupinus albus HOM05D000751 ORTHO05D000889 2.2e-07 59.3 75 44.0
SalBow5G0471 Salvia bowleyana HOM05D000751 ORTHO05D000889 2.2e-07 59.3 68 41.2
CANSAT56G1511 Cannabis sativa HOM05D000751 ORTHO05D000889 2.9e-07 58.9 69 44.9
Ah.05g179730 Amaranthus hybridus HOM05D000751 ORTHO05D000889 3.7e-07 58.5 80 40.0
AUR62004473 Chenopodium quinoa HOM05D000751 ORTHO05D000889 3.7e-07 58.5 64 46.9
Nitab4.5_0001715g0020 Nicotiana tabacum HOM05D000751 ORTHO05D000889 3.7e-07 58.5 79 36.7
Nitab4.5_0000838g0100 Nicotiana tabacum HOM05D000751 ORTHO05D000889 4.9e-07 58.2 60 45.0
Aa31LG10G15690 Aethionema arabicum HOM05D000751 ORTHO05D000889 6.4e-07 57.8 82 36.6
Aqoxy7G00122 Aquilegia oxysepala HOM05D000751 ORTHO05D000889 6.4e-07 57.8 67 47.8
SGA_v2.0_scaffold11G05730 Striga asiatica HOM05D000751 ORTHO05D000889 8.3e-07 57.4 72 41.7
MSTRG.20898 Avicennia marina HOM05D000751 ORTHO05D000889 1.1e-06 57.0 71 43.7
ECA236G1997 Erigeron canadensis HOM05D000751 ORTHO05D000889 1.4e-06 56.6 72 41.7
Sc26g0000690 Simmondsia chinensis HOM05D000751 ORTHO05D000889 1.9e-06 56.2 67 47.8
TAR375G0110 Trochodendron aralioides HOM05D000751 ORTHO05D000889 1.9e-06 56.2 70 45.7
HanXRQChr17g0562871 Helianthus annuus HOM05D000751 ORTHO05D000889 2.4e-06 55.8 85 43.5


User provided reference genes

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