Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01019959001 Vitis vinifera HOM05D001860 ORTHO05D004922 7.9e-169 597.0 307 100.0
Haze_11992 Corylus avellana HOM05D001860 ORTHO05D004922 5.4e-109 398.3 300 70.0
Hma1.2p1_1079F.1_g254970 Hydrangea macrophylla HOM05D001860 ORTHO05D004922 4.6e-108 395.2 261 74.7
Atru.chr11.1760 Acer truncatum HOM05D001860 ORTHO05D004922 1.5e-106 390.2 309 67.0
Cfa008963 Carpinus fangiana HOM05D001860 ORTHO05D004922 2.8e-105 386.0 297 68.7
CiPaw.06G086900 Carya illinoinensis HOM05D001860 ORTHO05D004922 4.0e-104 382.1 300 67.7
TWI31G0055 Tripterygium wilfordii HOM05D001860 ORTHO05D004922 2.0e-103 379.8 269 69.5
QL03p068521 Quercus lobata HOM05D001860 ORTHO05D004922 2.6e-103 379.4 295 66.8
TAR629G3174 Trochodendron aralioides HOM05D001860 ORTHO05D004922 4.4e-103 378.6 312 63.5
Manes.05G104100 Manihot esculenta HOM05D001860 ORTHO05D004922 2.9e-102 375.9 309 65.4
CSS0022995 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 1.9e-101 373.2 285 66.3
Rhsim12G0064600 Rhododendron simsii HOM05D001860 ORTHO05D004922 1.9e-101 373.2 286 66.8
Ciclev10032245m.g Citrus clementina HOM05D001860 ORTHO05D004922 5.4e-101 371.7 309 64.1
Thecc.02G343500 Theobroma cacao HOM05D001860 ORTHO05D004922 1.6e-100 370.2 307 61.2
RcHm_v2.0_Chr4g0439511 Rosa chinensis HOM05D001860 ORTHO05D004922 1.0e-99 367.5 313 62.6
FAN07G2810 Fragaria x ananassa HOM05D001860 ORTHO05D004922 1.3e-99 367.1 308 64.3
QL03p068503 Quercus lobata HOM05D001860 ORTHO05D004922 1.3e-99 367.1 289 65.7
FAN22G1600 Fragaria x ananassa HOM05D001860 ORTHO05D004922 3.0e-99 365.9 310 63.2
FAN12G1253 Fragaria x ananassa HOM05D001860 ORTHO05D004922 1.1e-98 364.0 309 63.1
QL03p068489 Quercus lobata HOM05D001860 ORTHO05D004922 1.5e-98 363.6 287 65.5
Actinidia31905 Actinidia chinensis HOM05D001860 ORTHO05D004922 4.3e-98 362.1 305 63.6
PSO478G0757 Papaver somniferum HOM05D001860 ORTHO05D004922 7.3e-98 361.3 264 68.6
Potri.008G088500 Populus trichocarpa HOM05D001860 ORTHO05D004922 7.3e-98 361.3 296 62.8
Duzib248G0566 Durio zibethinus HOM05D001860 ORTHO05D004922 9.6e-98 360.9 310 61.0
CANSAT64G2732 Cannabis sativa HOM05D001860 ORTHO05D004922 1.3e-97 360.5 303 61.4
Eucgr.B03211 Eucalyptus grandis HOM05D001860 ORTHO05D004922 2.8e-97 359.4 263 66.5
Nn3g17288 Nelumbo nucifera HOM05D001860 ORTHO05D004922 6.2e-97 358.2 274 65.0
vmacro01268 Vaccinium macrocarpon HOM05D001860 ORTHO05D004922 1.1e-96 357.5 295 62.7
PSO017G0798 Papaver somniferum HOM05D001860 ORTHO05D004922 5.3e-96 355.1 263 68.1
MBI05_g10765_MAGBIO Magnolia biondii HOM05D001860 ORTHO05D004922 3.4e-95 352.4 288 59.7
Phvul.002G083300 Phaseolus vulgaris HOM05D001860 ORTHO05D004922 5.8e-95 351.7 258 66.7
Sed0020595 Sechium edule HOM05D001860 ORTHO05D004922 1.7e-94 350.1 290 62.8
Gorai.013G087000 Gossypium raimondii HOM05D001860 ORTHO05D004922 2.2e-94 349.7 303 59.4
FvH4_4g31120 Fragaria vesca HOM05D001860 ORTHO05D004922 3.8e-94 349.0 290 64.5
Lsat_1_v5_gn_3_52040 Lactuca sativa HOM05D001860 ORTHO05D004922 3.8e-94 349.0 258 66.7
SalBow2G3316 Salvia bowleyana HOM05D001860 ORTHO05D004922 3.8e-94 349.0 258 66.7
Ca_04822_v3 Cicer arietinum L. HOM05D001860 ORTHO05D004922 9.3e-93 344.4 269 63.9
MD16G1070300 Malus domestica HOM05D001860 ORTHO05D004922 3.5e-92 342.4 326 56.1
Medtr5g041780 Medicago truncatula HOM05D001860 ORTHO05D004922 4.6e-92 342.0 258 64.7
Solyc06g084030.3 Solanum lycopersicum HOM05D001860 ORTHO05D004922 1.7e-91 340.1 293 60.1
Hund25222 Selenicereus undatus HOM05D001860 ORTHO05D004922 2.3e-91 339.7 266 63.9
HanXRQChr17g0545281 Helianthus annuus HOM05D001860 ORTHO05D004922 3.0e-91 339.3 259 65.6
Sopen06g035410 Solanum pennellii HOM05D001860 ORTHO05D004922 3.9e-91 339.0 293 60.4
Aqoxy5G04114 Aquilegia oxysepala HOM05D001860 ORTHO05D004922 8.7e-91 337.8 313 59.1
Glyma.02G109300 Glycine max HOM05D001860 ORTHO05D004922 8.7e-91 337.8 314 57.0
Lj3A1035T53 Lonicera japonica HOM05D001860 ORTHO05D004922 1.1e-90 337.4 222 73.9
PGSC0003DMG400020063 Solanum tuberosum HOM05D001860 ORTHO05D004922 3.3e-90 335.9 242 66.9
CAN.G771.16 Capsicum annuum HOM05D001860 ORTHO05D004922 4.3e-90 335.5 255 64.3
EL10Ac6g13236 Beta vulgaris HOM05D001860 ORTHO05D004922 7.4e-90 334.7 257 65.0
COL.COLO4_22943 Corchorus olitorius HOM05D001860 ORTHO05D004922 1.3e-89 334.0 313 57.2
MELO3C012111.2 Cucumis melo HOM05D001860 ORTHO05D004922 1.3e-89 334.0 308 58.4
Os02g0744100 Oryza sativa ssp. japonica HOM05D001860 ORTHO05D004922 1.3e-89 334.0 281 60.9
Lj2g0002858 Lotus japonicus HOM05D001860 ORTHO05D004922 1.6e-89 333.6 283 60.1
ECA246G1483 Erigeron canadensis HOM05D001860 ORTHO05D004922 2.1e-89 333.2 301 61.1
ClCG05G024130 Citrullus lanatus HOM05D001860 ORTHO05D004922 3.6e-89 332.4 272 63.6
Oeu028270.1 Olea europaea HOM05D001860 ORTHO05D004922 8.1e-89 331.3 263 64.6
CsaV3_5G032900 Cucumis sativus L. HOM05D001860 ORTHO05D004922 1.1e-88 330.9 308 58.4
CsaV3_5G032890 Cucumis sativus L. HOM05D001860 ORTHO05D004922 1.4e-88 330.5 279 60.9
Psat2g116760 Pisum sativum HOM05D001860 ORTHO05D004922 1.8e-88 330.1 258 64.0
Sabra08G0066100 Salix brachista HOM05D001860 ORTHO05D004922 3.1e-88 329.3 377 50.7
vmacro01267 Vaccinium macrocarpon HOM05D001860 ORTHO05D004922 4.0e-88 328.9 364 51.9
Migut.L01273 Erythranthe guttata HOM05D001860 ORTHO05D004922 2.6e-87 326.2 222 70.7
arahy.Tifrunner.gnm1.ann1.0UW6S5 Arachis hypogaea HOM05D001860 ORTHO05D004922 3.8e-86 322.4 311 56.3
Lalb_Chr04g0255941 Lupinus albus HOM05D001860 ORTHO05D004922 3.8e-86 322.4 333 52.0
MSTRG.7790 Avicennia marina HOM05D001860 ORTHO05D004922 6.4e-86 321.6 306 54.6
Cc11_g12800 Coffea canephora HOM05D001860 ORTHO05D004922 8.4e-86 321.2 291 59.1
Peaxi162Scf01530g00038 Petunia axillaris HOM05D001860 ORTHO05D004922 1.4e-85 320.5 220 68.2
Nitab4.5_0001044g0130 Nicotiana tabacum HOM05D001860 ORTHO05D004922 1.9e-85 320.1 220 67.7
Nitab4.5_0006433g0040 Nicotiana tabacum HOM05D001860 ORTHO05D004922 1.9e-85 320.1 219 68.5
DCAR_026253 Daucus carota HOM05D001016 ORTHO05D003396 2.4e-85 319.7 332 54.2
AUR62032811 Chenopodium quinoa HOM05D001860 ORTHO05D004922 3.5e-84 315.8 222 68.0
Zm00001eb194590 Zea mays HOM05D001860 ORTHO05D004922 3.5e-84 315.8 261 59.4
arahy.Tifrunner.gnm1.ann1.WF3EDY Arachis hypogaea HOM05D001860 ORTHO05D004922 3.0e-83 312.8 344 50.3
BcaB03g14715 Brassica carinata HOM05D001860 ORTHO05D004922 3.9e-83 312.4 255 59.2
BolC6t39398H Brassica oleracea HOM05D001860 ORTHO05D004922 5.1e-83 312.0 256 59.8
arahy.Tifrunner.gnm1.ann1.F2WL4X Arachis hypogaea HOM05D001860 ORTHO05D004922 6.7e-83 311.6 344 50.3
HPP92_016837 Vanilla planifolia HOM05D001860 ORTHO05D004922 6.7e-83 311.6 256 59.0
AT1G69523 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 1.1e-82 310.8 263 58.2
C06p40340 Brassica napus HOM05D001860 ORTHO05D004922 1.5e-82 310.5 256 59.8
Aa31LG4G11250 Aethionema arabicum HOM05D001860 ORTHO05D004922 2.5e-82 309.7 306 54.9
A07p35830 Brassica napus HOM05D001860 ORTHO05D004922 3.3e-82 309.3 270 57.4
BraA07t31169Z Brassica rapa HOM05D001860 ORTHO05D004922 3.3e-82 309.3 270 57.4
BolC6t39396H Brassica oleracea HOM05D001860 ORTHO05D004922 1.3e-81 307.4 301 53.2
SEGI_35280 Sequoiadendron giganteum HOM05D001860 ORTHO05D004922 2.8e-81 306.2 269 57.6
BraA07t31170Z Brassica rapa HOM05D001860 ORTHO05D004922 3.7e-81 305.8 308 52.9
Carub.0002s1616 Capsella rubella HOM05D001860 ORTHO05D004922 6.2e-81 305.1 254 60.2
A07p35840 Brassica napus HOM05D001860 ORTHO05D004922 8.1e-81 304.7 308 52.9
FAN17G3114 Fragaria x ananassa HOM05D001860 ORTHO05D004922 8.1e-81 304.7 308 57.5
ATR0564G196 Amborella trichopoda HOM05D001860 ORTHO05D004922 1.1e-80 304.3 261 57.9
SGA_v2.0_scaffold172G38956 Striga asiatica HOM05D001860 ORTHO05D004922 3.1e-80 302.8 315 52.4
A07p35850 Brassica napus HOM05D001860 ORTHO05D004922 4.0e-80 302.4 301 54.5
TPR.G36138 Trifolium pratense HOM05D001860 ORTHO05D004922 5.3e-80 302.0 217 65.9
MELO3C012110.2 Cucumis melo HOM05D001860 ORTHO05D004922 6.9e-80 301.6 307 53.4
Sp5g24630 Schrenkiella parvula HOM05D001860 ORTHO05D004922 1.2e-79 300.8 302 53.3
THA.LOC104822044 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 1.2e-79 300.8 298 53.4
CDE04G1474 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 1.5e-79 300.4 257 56.8
Thhalv10018913m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 3.4e-79 299.3 268 57.1
THA.LOC104822045 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 3.4e-79 299.3 283 55.8
Carub.0002s1615 Capsella rubella HOM05D001860 ORTHO05D004922 7.6e-79 298.1 257 57.6
BraA07t30786Z Brassica rapa HOM05D001860 ORTHO05D004922 1.7e-78 297.0 257 58.8
AL2G28650 Arabidopsis lyrata HOM05D001860 ORTHO05D004922 2.2e-78 296.6 256 57.4
BcaB03g15478 Brassica carinata HOM05D001860 ORTHO05D004922 2.9e-78 296.2 304 54.3
BcaB03g14720 Brassica carinata HOM05D001860 ORTHO05D004922 8.4e-78 294.7 300 51.7
BcaC08g46390 Brassica carinata HOM05D001860 ORTHO05D004922 8.4e-78 294.7 277 54.5
C06p40330 Brassica napus HOM05D001860 ORTHO05D004922 8.4e-78 294.7 301 53.5
BcaC08g46392 Brassica carinata HOM05D001860 ORTHO05D004922 2.5e-77 293.1 299 53.5
Carub.0002s1617 Capsella rubella HOM05D001860 ORTHO05D004922 3.2e-77 292.7 260 56.9
Sp5g24640 Schrenkiella parvula HOM05D001860 ORTHO05D004922 7.1e-77 291.6 258 57.4
BraA07t31171Z Brassica rapa HOM05D001860 ORTHO05D004922 1.6e-76 290.4 296 53.7
BolC6t39399H Brassica oleracea HOM05D001860 ORTHO05D004922 4.6e-76 288.9 300 52.7
C06p40360 Brassica napus HOM05D001860 ORTHO05D004922 1.3e-75 287.3 229 60.7
unitig_26.g10298 Utricularia gibba HOM05D001860 ORTHO05D004922 5.1e-75 285.4 277 53.8
THA.LOC104822184 Tarenaya hassleriana HOM05D001860 ORTHO05D004922 1.5e-74 283.9 223 61.9
AT1G69526 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 2.5e-74 283.1 309 51.1
CARHR062460 Cardamine hirsuta HOM05D001860 ORTHO05D004922 3.1e-72 276.2 302 51.3
CDE06G2440 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 5.3e-72 275.4 222 58.1
Gohir.A13G076700 Gossypium hirsutum HOM05D001860 ORTHO05D004922 3.4e-71 272.7 211 64.5
Prupe.1G276900 Prunus persica HOM05D001860 ORTHO05D004922 5.9e-71 271.9 248 60.1
Gohir.D13G076400 Gossypium hirsutum HOM05D001860 ORTHO05D004922 3.2e-69 266.2 237 58.6
SMO239G0167 Selaginella moellendorffii HOM05D001860 ORTHO05D004922 3.2e-69 266.2 258 54.7
Pp3c24_6910 Physcomitrium patens HOM05D001860 ORTHO05D004922 5.5e-69 265.4 222 58.6
AagrBONN_evm.TU.Sc2ySwM_368.914 Anthoceros agrestis HOM05D001860 ORTHO05D004922 2.3e-67 260.0 271 50.9
CARHR062480 Cardamine hirsuta HOM05D001860 ORTHO05D004922 4.1e-64 249.2 204 60.8
Mapoly0002s0191 Marchantia polymorpha HOM05D001860 ORTHO05D004922 6.9e-64 248.4 255 50.6
PGR102G3336 Punica granatum HOM05D001860 ORTHO05D004922 6.5e-62 241.9 176 67.0
Carub.0002s1614 Capsella rubella HOM05D001860 ORTHO05D004922 1.1e-58 231.1 217 53.9
AL2G28640 Arabidopsis lyrata HOM05D001860 ORTHO05D004922 5.7e-58 228.8 214 52.3
A07p35820 Brassica napus HOM05D001482 ORTHO05D001499 1.3e-57 227.6 263 47.5
CARHR062450 Cardamine hirsuta HOM05D001860 ORTHO05D004922 1.7e-57 227.3 215 53.5
BraA07t31168Z Brassica rapa HOM05D001482 ORTHO05D001499 2.8e-57 226.5 263 47.5
BcaC08g46388 Brassica carinata HOM05D001860 ORTHO05D004922 3.7e-57 226.1 214 52.3
CSS0019961 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 3.7e-57 226.1 164 67.7
BolC6t39394H Brassica oleracea HOM05D001482 ORTHO05D001499 1.1e-56 224.6 214 52.8
BcaB03g14714 Brassica carinata HOM05D001860 ORTHO05D004922 1.8e-56 223.8 214 52.8
Ah.02g129590 Amaranthus hybridus HOM05D001860 ORTHO05D004922 3.1e-56 223.0 258 49.2
Thhalv10019583m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 3.1e-56 223.0 214 52.8
Sp5g24610 Schrenkiella parvula HOM05D001860 ORTHO05D004922 5.9e-55 218.8 214 52.3
AT1G69520 Arabidopsis thaliana HOM05D001860 ORTHO05D004922 1.7e-54 217.2 198 54.0
Dinv16666 Davidia involucrata HOM05D001860 ORTHO05D004922 1.9e-53 213.8 178 64.6
C06p40380 Brassica napus HOM05D001482 ORTHO05D001499 5.7e-50 202.2 230 47.4
Sc11g0002060 Simmondsia chinensis HOM05D001860 ORTHO05D004922 7.4e-50 201.8 217 53.0
SMO137G0248 Selaginella moellendorffii HOM05D001860 ORTHO05D004922 3.1e-48 196.4 201 47.8
BcaB03g14717 Brassica carinata HOM05D001860 ORTHO05D004922 2.9e-46 189.9 166 56.0
AUR62005816 Chenopodium quinoa HOM05D001860 ORTHO05D004922 2.9e-46 189.9 136 66.9
Aa31LG4G11270 Aethionema arabicum HOM05D001860 ORTHO05D004922 1.6e-44 184.1 236 44.9
Cpa.g.sc350.4 Carica papaya HOM05D001860 ORTHO05D004922 3.0e-43 179.9 130 70.0
Sp5g24620 Schrenkiella parvula HOM05D001860 ORTHO05D004922 2.0e-42 177.2 140 60.7
Oeu028272.1 Olea europaea HOM05D001860 ORTHO05D004922 3.8e-38 162.9 144 59.0
BcaC08g45887 Brassica carinata HOM05D001860 ORTHO05D004922 2.1e-36 157.1 131 60.3
Thhalv10019188m.g Eutrema salsugineum HOM05D001860 ORTHO05D004922 3.6e-36 156.4 188 48.9
C06p40370 Brassica napus HOM05D001860 ORTHO05D004922 1.8e-35 154.1 117 65.0
MCO03G556 Micromonas commoda HOM05D001860 ORTHO05D004922 3.0e-35 153.3 242 37.2
A07p31570 Brassica napus HOM05D001860 ORTHO05D004922 8.8e-35 151.8 120 63.3
CBR_g41443 Chara braunii HOM05D001860 ORTHO05D004922 4.4e-34 149.4 264 36.4
C06p36870 Brassica napus HOM05D000005 ORTHO05D042562 1.3e-33 147.9 120 62.5
BolC6t38800H Brassica oleracea HOM05D000005 ORTHO05D042562 6.3e-33 145.6 120 61.7
MCO09G753 Micromonas commoda HOM05D001860 ORTHO05D004922 3.2e-29 133.3 136 47.8
PRCOL_00003589 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 3.6e-28 129.8 191 41.4
PRCOL_00000783 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 8.0e-28 128.6 194 40.7
Cre07.g342550 Chlamydomonas reinhardtii HOM05D001860 ORTHO05D004922 8.8e-27 125.2 251 34.3
CSS0034144 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 2.8e-25 120.2 83 71.1
VMungo1383G2064 Vigna mungo HOM05D001860 ORTHO05D004922 3.1e-24 116.7 89 57.3
CSS0016207 Camellia sinensis var. sinensis HOM05D001860 ORTHO05D004922 4.1e-24 116.3 76 71.1
Thecc.01G276100 Theobroma cacao HOM05D001860 ORTHO05D004922 2.5e-21 107.1 84 58.3
Actinidia19883 Actinidia chinensis HOM05D001860 ORTHO05D004922 5.2e-19 99.4 105 52.4
arahy.Tifrunner.gnm1.ann1.661SM0 Arachis hypogaea HOM05D001860 ORTHO05D004922 9.2e-16 88.6 85 52.9
CBR_g34579 Chara braunii HOM05D001860 ORTHO05D019626 6.2e-12 75.9 178 37.1
MCO03G203 Micromonas commoda HOM05D023757 ORTHO05D024904 4.0e-11 73.2 137 36.5
PRCOL_00001331 Prasinoderma coloniale HOM05D001860 ORTHO05D004922 4.4e-10 69.7 217 28.1
Zm00001eb254460 Zea mays HOM05D001860 ORTHO05D004922 5.8e-10 69.3 77 48.1
CDE08G0834 Ceratophyllum demersum HOM05D001860 ORTHO05D004922 1.7e-09 67.8 59 55.9
Cfa024139 Carpinus fangiana HOM05D001860 ORTHO05D004922 2.2e-09 67.4 165 29.7
TPR.G39184 Trifolium pratense HOM05D001860 ORTHO05D004922 3.7e-09 66.6 59 54.2
AagrBONN_evm.TU.Sc2ySwM_368.1265 Anthoceros agrestis HOM05D019459 ORTHO05D019626 2.4e-08 63.9 187 31.0
MCO11G161 Micromonas commoda HOM05D019459 ORTHO05D019626 2.7e-07 60.5 138 33.3
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 3.9e-06 56.6 166 26.5
arahy.Tifrunner.gnm1.ann1.0L29ML Arachis hypogaea HOM05D005383 ORTHO05D006722 5.0e-06 56.2 31 90.3


User provided reference genes

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