Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01019819001 Vitis vinifera HOM05D005348 ORTHO05D006635 0.0e+00 1639.0 819 100.0
TAR375G0646 Trochodendron aralioides HOM05D005348 ORTHO05D006635 0.0e+00 1077.0 815 70.8
Actinidia05223 Actinidia chinensis HOM05D005348 ORTHO05D006635 8.0e-309 1063.5 821 66.7
CiPaw.11G140300 Carya illinoinensis HOM05D005348 ORTHO05D006635 8.8e-308 1060.1 809 68.5
QL12p017446 Quercus lobata HOM05D005348 ORTHO05D006635 6.3e-306 1053.9 773 71.3
Dinv39001 Davidia involucrata HOM05D005348 ORTHO05D006635 1.3e-303 1046.2 830 65.5
Prupe.5G092400 Prunus persica HOM05D005348 ORTHO05D006635 1.4e-300 1036.2 791 67.8
CSS0016729 Camellia sinensis var. sinensis HOM05D005348 ORTHO05D006635 2.3e-300 1035.4 793 66.0
Migut.E01288 Erythranthe guttata HOM05D005348 ORTHO05D006635 4.4e-299 1031.2 745 69.0
FvH4_5g28890 Fragaria vesca HOM05D005348 ORTHO05D006635 8.6e-295 1016.9 778 67.2
Eucgr.D01915 Eucalyptus grandis HOM05D005348 ORTHO05D006635 2.3e-292 1008.8 817 63.2
PGR031G1121 Punica granatum HOM05D005348 ORTHO05D006635 3.1e-292 1008.4 777 67.2
MD04G1066100 Malus domestica HOM05D005348 ORTHO05D006635 1.2e-291 1006.5 753 69.1
Manes.02G025740 Manihot esculenta HOM05D005348 ORTHO05D006635 4.9e-290 1001.1 763 68.5
Sc05g0000210 Simmondsia chinensis HOM05D005348 ORTHO05D006635 2.4e-289 998.8 803 64.6
Duzib068G0163 Durio zibethinus HOM05D005348 ORTHO05D006635 2.3e-287 992.3 707 68.9
Thecc.03G272300 Theobroma cacao HOM05D005348 ORTHO05D006635 3.0e-287 991.9 666 72.2
Phvul.002G154300 Phaseolus vulgaris HOM05D005348 ORTHO05D006635 1.2e-285 986.5 737 66.8
Cc08_g14090 Coffea canephora HOM05D005348 ORTHO05D006635 3.6e-285 984.9 822 61.6
Medtr5g010740 Medicago truncatula HOM05D005348 ORTHO05D006635 1.4e-284 983.0 707 68.9
CAN.G981.21 Capsicum annuum HOM05D005348 ORTHO05D006635 2.3e-284 982.2 845 60.1
CANSAT21G2165 Cannabis sativa HOM05D005348 ORTHO05D006635 1.2e-283 979.9 682 70.4
Psat2g181800 Pisum sativum HOM05D005348 ORTHO05D006635 1.5e-283 979.5 803 61.9
Gorai.007G022400 Gossypium raimondii HOM05D005348 ORTHO05D006635 2.0e-283 979.2 781 63.9
Aqoxy7G00422 Aquilegia oxysepala HOM05D005348 ORTHO05D006635 1.3e-282 976.5 779 64.8
Lj2g0017844 Lotus japonicus HOM05D005348 ORTHO05D006635 2.9e-282 975.3 769 64.2
TPR.G6715 Trifolium pratense HOM05D005348 ORTHO05D006635 2.9e-282 975.3 812 61.0
PSO782G2170 Papaver somniferum HOM05D005348 ORTHO05D006635 8.3e-282 973.8 738 66.3
Sopen08g028770 Solanum pennellii HOM05D005348 ORTHO05D006635 3.2e-281 971.8 849 59.4
Ciclev10019148m.g Citrus clementina HOM05D005348 ORTHO05D006635 9.2e-281 970.3 727 69.5
RcHm_v2.0_Chr4g0410761 Rosa chinensis HOM05D005348 ORTHO05D006635 1.2e-280 969.9 782 65.2
ClCG01G003080 Citrullus lanatus HOM05D005348 ORTHO05D006635 1.1e-278 963.4 756 64.3
Sabra01G0082300 Salix brachista HOM05D005348 ORTHO05D006635 1.2e-277 959.9 805 61.4
PSO478G3496 Papaver somniferum HOM05D005348 ORTHO05D006635 2.8e-277 958.7 738 65.6
Sed0022971 Sechium edule HOM05D005348 ORTHO05D006635 2.1e-272 942.6 748 63.0
SGA_v2.0_scaffold144G35970 Striga asiatica HOM05D005348 ORTHO05D006635 3.0e-271 938.7 797 61.5
TWI15G0275 Tripterygium wilfordii HOM05D005348 ORTHO05D006635 3.9e-271 938.3 698 66.9
vmacro13927 Vaccinium macrocarpon HOM05D005348 ORTHO05D006635 6.6e-271 937.6 850 58.7
THA.LOC104813014 Tarenaya hassleriana HOM05D005348 ORTHO05D006635 2.8e-269 932.2 715 64.6
FAN13G3003 Fragaria x ananassa HOM05D005348 ORTHO05D006635 3.1e-268 928.7 803 62.8
arahy.Tifrunner.gnm1.ann1.SKE7H3 Arachis hypogaea HOM05D005348 ORTHO05D006635 3.4e-267 925.2 729 64.1
SHI23548 Sapria himalayana HOM05D005348 ORTHO05D006635 1.1e-265 920.2 765 61.7
arahy.Tifrunner.gnm1.ann1.C7APUF Arachis hypogaea HOM05D005348 ORTHO05D006635 3.2e-265 918.7 729 64.7
Rhsim07G0093800 Rhododendron simsii HOM05D005348 ORTHO05D006635 4.2e-265 918.3 965 52.8
Carub.0006s3081 Capsella rubella HOM05D005348 ORTHO05D006635 1.2e-264 916.8 691 65.6
Lalb_Chr16g0377191 Lupinus albus HOM05D005348 ORTHO05D006635 1.2e-264 916.8 784 61.1
Nn6g34225 Nelumbo nucifera HOM05D005348 ORTHO05D006635 2.7e-264 915.6 1072 49.2
CARHR254650 Cardamine hirsuta HOM05D005348 ORTHO05D006635 6.6e-263 911.0 675 65.9
EL10Ac4g10111 Beta vulgaris HOM05D005348 ORTHO05D006635 1.9e-262 909.4 791 62.1
AT4G11720 Arabidopsis thaliana HOM05D005348 ORTHO05D006635 2.5e-262 909.1 692 65.3
AL6G46320 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 5.6e-262 907.9 756 63.5
BolC9t56320H Brassica oleracea HOM05D005348 ORTHO05D006635 1.3e-261 906.7 675 65.3
DCAR_006756 Daucus carota HOM05D005348 ORTHO05D006635 1.3e-261 906.7 813 61.4
AL6G46446 Arabidopsis lyrata HOM05D005348 ORTHO05D006635 1.6e-261 906.4 758 62.0
BraA09t38310Z Brassica rapa HOM05D005348 ORTHO05D006635 2.4e-260 902.5 672 65.5
SalBow1G6288 Salvia bowleyana HOM05D005348 ORTHO05D006635 9.0e-260 900.6 714 64.4
Haze_08938 Corylus avellana HOM05D005348 ORTHO05D006635 1.2e-259 900.2 824 60.3
Sp6g05730 Schrenkiella parvula HOM05D005348 ORTHO05D006635 2.0e-259 899.4 669 65.5
Ah.06g194640 Amaranthus hybridus HOM05D005348 ORTHO05D006635 2.7e-256 889.0 663 66.5
Lsat_1_v5_gn_3_5380 Lactuca sativa HOM05D005348 ORTHO05D006635 2.8e-253 879.0 695 62.3
Potri.001G109000 Populus trichocarpa HOM05D005348 ORTHO05D006635 6.9e-252 874.4 612 69.9
A09p27390 Brassica napus HOM05D005348 ORTHO05D006635 2.0e-251 872.8 672 64.0
C09p34740 Brassica napus HOM05D005348 ORTHO05D006635 1.7e-250 869.8 675 63.6
Manes.01G066000 Manihot esculenta HOM05D005348 ORTHO05D006635 2.9e-250 869.0 629 69.0
BcaB01g01675 Brassica carinata HOM05D005348 ORTHO05D006635 6.4e-250 867.8 759 59.2
ECA240G2378 Erigeron canadensis HOM05D005348 ORTHO05D006635 5.4e-249 864.8 789 59.4
BcaB05g23815 Brassica carinata HOM05D005348 ORTHO05D006635 1.4e-244 850.1 788 58.2
Aa31LG9G10660 Aethionema arabicum HOM05D005348 ORTHO05D006635 6.9e-244 847.8 656 64.9
FAN18G1071 Fragaria x ananassa HOM05D005348 ORTHO05D006635 6.9e-244 847.8 668 64.8
Glyma.15G240000 Glycine max HOM05D005348 ORTHO05D006635 1.9e-241 839.7 606 68.3
MELO3C005635.2 Cucumis melo HOM05D005348 ORTHO05D006635 5.5e-241 838.2 639 65.3
Nitab4.5_0002234g0010 Nicotiana tabacum HOM05D005348 ORTHO05D006635 7.9e-240 834.3 825 55.0
Thhalv10028515m.g Eutrema salsugineum HOM05D005348 ORTHO05D006635 1.8e-239 833.2 602 66.3
Glyma.11G026100 Glycine max HOM05D005348 ORTHO05D006635 1.8e-239 833.2 606 67.8
FAN18G0890 Fragaria x ananassa HOM05D005348 ORTHO05D006635 3.0e-239 832.4 778 59.1
RcHm_v2.0_Chr7g0199071 Rosa chinensis HOM05D005348 ORTHO05D006635 1.6e-229 800.0 781 56.6
Atru.chr9.1551 Acer truncatum HOM05D005348 ORTHO05D006635 9.0e-228 794.3 534 74.2
Glyma.09G081600 Glycine max HOM05D005348 ORTHO05D006635 2.6e-227 792.7 557 69.1
CsaV3_5G003200 Cucumis sativus L. HOM05D005348 ORTHO05D006635 1.0e-223 780.8 609 65.5
Peaxi162Scf00714g00430 Petunia axillaris HOM05D005348 ORTHO05D006635 1.4e-220 770.4 573 67.5
Solyc08g080450.3 Solanum lycopersicum HOM05D005348 ORTHO05D006635 4.8e-213 745.3 630 61.0
AUR62006548 Chenopodium quinoa HOM05D005348 ORTHO05D006635 2.4e-212 743.0 584 63.2
MBI04_g31975_MAGBIO Magnolia biondii HOM05D005348 ORTHO05D006635 7.0e-212 741.5 700 56.9
AUR62037708 Chenopodium quinoa HOM05D005348 ORTHO05D006635 1.2e-211 740.7 604 62.9
AUR62000200 Chenopodium quinoa HOM05D005348 ORTHO05D006635 1.5e-206 723.8 617 60.1
Gohir.D11G021100 Gossypium hirsutum HOM05D005348 ORTHO05D006635 2.5e-201 706.4 511 68.1
COL.COLO4_05261 Corchorus olitorius HOM05D005348 ORTHO05D006635 4.7e-200 702.2 779 52.5
Os05g0269500 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 2.2e-197 693.3 674 53.3
Gohir.A11G021400 Gossypium hirsutum HOM05D005348 ORTHO05D006635 4.5e-195 685.6 437 75.1
FvH4_5g01650 Fragaria vesca HOM05D005348 ORTHO05D006635 1.1e-193 681.0 596 60.6
Nitab4.5_0002853g0050 Nicotiana tabacum HOM05D005348 ORTHO05D006635 1.1e-193 681.0 826 49.5
VMungo1215G1946 Vigna mungo HOM05D005348 ORTHO05D006635 3.4e-190 669.5 474 69.2
Os09g0525700 Oryza sativa ssp. japonica HOM05D005348 ORTHO05D006635 2.7e-187 659.8 651 53.9
Lj8C237T7 Lonicera japonica HOM05D005348 ORTHO05D006635 1.1e-177 627.9 407 74.9
Ca_06657_v3 Cicer arietinum L. HOM05D005348 ORTHO05D006635 8.3e-173 611.7 704 50.4
unitig_26.g9696 Utricularia gibba HOM05D005348 ORTHO05D006635 7.3e-161 572.0 728 47.0
Cpa.g.sc29.190 Carica papaya HOM05D005348 ORTHO05D006635 1.6e-147 527.7 412 64.1
HPP92_004952 Vanilla planifolia HOM05D005348 ORTHO05D006635 4.3e-137 493.0 653 43.0
Zm00001eb103180 Zea mays HOM05D005348 ORTHO05D006635 5.8e-134 482.6 489 50.7
Glyma.09G081420 Glycine max HOM05D005348 ORTHO05D006635 1.0e-117 428.7 340 63.8
AUR62000197 Chenopodium quinoa HOM05D005348 ORTHO05D006635 1.6e-112 411.4 344 62.2
ATR0757G099 Amborella trichopoda HOM05D005348 ORTHO05D006635 9.4e-92 342.4 209 75.6
Hund02678 Selenicereus undatus HOM05D005348 ORTHO05D006635 4.7e-83 313.5 330 57.0
VMungo1215G1628 Vigna mungo HOM05D005348 ORTHO05D006635 7.0e-79 299.7 241 59.8
FAN04G2632 Fragaria x ananassa HOM05D005348 ORTHO05D006635 3.8e-77 293.9 753 32.3
Hund02677 Selenicereus undatus HOM05D005348 ORTHO05D006635 1.9e-76 291.6 359 49.6
FAN04G3017 Fragaria x ananassa HOM05D005348 ORTHO05D006635 9.5e-76 289.3 245 66.5
Prupe.8G039400 Prunus persica HOM05D005348 ORTHO05D006635 2.7e-75 287.7 257 61.5
Prupe.8G039500 Prunus persica HOM05D005348 ORTHO05D006635 6.1e-75 286.6 359 46.2
Peaxi162Scf00714g00422 Petunia axillaris HOM05D005348 ORTHO05D006635 3.5e-62 244.2 243 56.0
MSTRG.13824 Avicennia marina HOM05D005348 ORTHO05D006635 1.1e-55 222.6 201 57.7
Glyma.09G081380 Glycine max HOM05D005348 ORTHO05D006635 3.5e-54 217.6 176 61.9
FAN08G1421 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.2e-46 192.6 137 71.5
MBI04_g31964_MAGBIO Magnolia biondii HOM05D005348 ORTHO05D006635 2.5e-44 184.9 254 44.1
Glyma.11G176306 Glycine max HOM05D005348 ORTHO05D006635 3.6e-43 181.0 91 87.9
Glyma.01G216933 Glycine max HOM05D005348 ORTHO05D006635 1.9e-39 168.7 115 70.4
PGSC0003DMG400003049 Solanum tuberosum HOM05D005348 ORTHO05D006635 2.4e-39 168.3 205 52.7
HanXRQChr02g0035411 Helianthus annuus HOM05D005348 ORTHO05D006635 5.6e-36 157.1 118 59.3
FAN08G1570 Fragaria x ananassa HOM05D005348 ORTHO05D006635 7.6e-33 146.7 250 37.2
Gohir.D11G021150 Gossypium hirsutum HOM05D005348 ORTHO05D006635 2.2e-32 145.2 132 61.4
FAN08G2219 Fragaria x ananassa HOM05D005348 ORTHO05D006635 1.4e-31 142.5 147 55.1
Glyma.11G026250 Glycine max HOM05D005348 ORTHO05D006635 9.3e-31 139.8 89 79.8
CBR_g19301 Chara braunii HOM05D005348 ORTHO05D006635 6.0e-30 137.1 637 22.9
Pp3c25_15230 Physcomitrium patens HOM05D005348 ORTHO05D006635 1.0e-29 136.3 339 28.9
Cre16.g674852 Chlamydomonas reinhardtii HOM05D005348 ORTHO05D006635 3.9e-29 134.4 724 22.7
Mapoly0066s0032 Marchantia polymorpha HOM05D005348 ORTHO05D006635 1.5e-28 132.5 740 21.5
Lj8A237G27 Lonicera japonica HOM05D005348 ORTHO05D006635 2.8e-27 128.3 80 77.5
ATR0757G119 Amborella trichopoda HOM05D005348 ORTHO05D006635 4.5e-25 120.9 213 40.4
FAN13G0849 Fragaria x ananassa HOM05D005348 ORTHO05D006635 5.8e-25 120.6 96 65.6
Mapoly0035s0066 Marchantia polymorpha HOM05D005348 ORTHO05D006635 4.2e-23 114.4 707 21.8
FvH4_5g01630 Fragaria vesca HOM05D005348 ORTHO05D006635 2.5e-20 105.1 64 75.0
arahy.Tifrunner.gnm1.ann1.AXGL4F Arachis hypogaea HOM05D005348 ORTHO05D006635 6.9e-18 97.1 59 76.3
AagrBONN_evm.TU.Sc2ySwM_368.2662 Anthoceros agrestis HOM05D005348 ORTHO05D006635 1.8e-13 82.4 478 24.1
CsaV3_6G021380 Cucumis sativus L. HOM05D005348 ORTHO05D006635 7.6e-09 67.0 194 27.8


User provided reference genes

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