Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01019542001 Vitis vinifera HOM05D007126 ORTHO05D008974 4.6e-308 1060.4 559 100.0
Prupe.5G121000 Prunus persica HOM05D007126 ORTHO05D008974 6.8e-235 817.4 569 76.1
CiPaw.11G120500 Carya illinoinensis HOM05D007126 ORTHO05D008974 9.2e-232 807.0 581 74.9
CANSAT21G1075 Cannabis sativa HOM05D007126 ORTHO05D008974 1.6e-231 806.2 566 75.3
MD06G1108400 Malus domestica HOM05D007126 ORTHO05D008974 2.7e-231 805.4 568 75.4
QL02p030251 Quercus lobata HOM05D007126 ORTHO05D008974 7.3e-229 797.3 601 72.2
Thecc.03G299000 Theobroma cacao HOM05D007126 ORTHO05D008974 8.9e-227 790.4 586 72.4
Actinidia22167 Actinidia chinensis HOM05D007126 ORTHO05D008974 2.0e-226 789.3 584 73.5
Gorai.008G255000 Gossypium raimondii HOM05D007126 ORTHO05D008974 7.1e-224 780.8 578 72.1
CSS0001738 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 3.5e-223 778.5 581 74.5
Gohir.D12G238100 Gossypium hirsutum HOM05D007126 ORTHO05D008974 3.5e-223 778.5 578 72.0
Gohir.A12G236900 Gossypium hirsutum HOM05D007126 ORTHO05D008974 7.8e-223 777.3 578 71.8
Atru.chr9.1985 Acer truncatum HOM05D007126 ORTHO05D008974 1.9e-221 772.7 587 71.4
Atru.chr9.1971 Acer truncatum HOM05D007126 ORTHO05D008974 2.5e-221 772.3 586 71.3
Manes.01G047820 Manihot esculenta HOM05D007126 ORTHO05D008974 2.5e-221 772.3 575 72.5
Duzib205G0473 Durio zibethinus HOM05D007126 ORTHO05D008974 2.1e-220 769.2 580 70.7
CSS0007498 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 1.4e-219 766.5 578 73.7
Hma1.2p1_0440F.1_g153370 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 6.8e-219 764.2 533 77.7
HanXRQChr17g0534861 Helianthus annuus HOM05D007126 ORTHO05D008974 8.9e-219 763.8 569 71.4
RcHm_v2.0_Chr7g0194681 Rosa chinensis HOM05D007126 ORTHO05D008974 7.6e-218 760.8 566 73.0
PGR031G2002 Punica granatum HOM05D007126 ORTHO05D008974 2.2e-217 759.2 572 70.8
Potri.001G090800 Populus trichocarpa HOM05D007126 ORTHO05D008974 8.4e-217 757.3 589 70.3
Ciclev10019342m.g Citrus clementina HOM05D007126 ORTHO05D008974 1.4e-216 756.5 552 71.7
TWI15G1063 Tripterygium wilfordii HOM05D007126 ORTHO05D008974 1.4e-216 756.5 568 72.0
Eucgr.D01749 Eucalyptus grandis HOM05D007126 ORTHO05D008974 3.0e-214 748.8 504 77.2
ECA246G3461 Erigeron canadensis HOM05D007126 ORTHO05D008974 3.9e-214 748.4 564 71.8
Potri.003G140800 Populus trichocarpa HOM05D007126 ORTHO05D008974 6.6e-214 747.7 540 74.1
Haze_09075 Corylus avellana HOM05D007126 ORTHO05D008974 1.1e-213 746.9 627 67.3
Nitab4.5_0000726g0050 Nicotiana tabacum HOM05D007126 ORTHO05D008974 1.2e-212 743.4 571 70.1
Lj4g0010714 Lotus japonicus HOM05D007126 ORTHO05D008974 1.1e-211 740.3 574 69.5
Glyma.08G023000 Glycine max HOM05D007126 ORTHO05D008974 3.1e-211 738.8 573 67.7
Sed0013130 Sechium edule HOM05D007126 ORTHO05D008974 1.2e-210 736.9 572 69.9
Medtr8g099525 Medicago truncatula HOM05D007126 ORTHO05D008974 1.5e-210 736.5 567 68.6
PGSC0003DMG400004995 Solanum tuberosum HOM05D007126 ORTHO05D008974 1.1e-208 730.3 566 69.1
CsaV3_4G006650 Cucumis sativus L. HOM05D007126 ORTHO05D008974 7.8e-207 724.2 581 68.2
PSO063G3961 Papaver somniferum HOM05D007126 ORTHO05D008974 2.3e-206 722.6 558 68.5
CAN.G390.5 Capsicum annuum HOM05D007126 ORTHO05D008974 5.1e-206 721.5 564 69.5
Migut.A00631 Erythranthe guttata HOM05D007126 ORTHO05D008974 1.1e-205 720.3 538 71.2
Hund11386 Selenicereus undatus HOM05D007126 ORTHO05D008974 2.5e-205 719.2 549 68.9
VMungo0251G2926 Vigna mungo HOM05D007126 ORTHO05D008974 4.3e-205 718.4 579 66.0
Sopen12g024410 Solanum pennellii HOM05D007126 ORTHO05D008974 5.6e-205 718.0 565 69.2
Aqoxy5G04057_Aqoxy5G04058 Aquilegia oxysepala HOM05D007126 ORTHO05D008974 7.3e-205 717.6 510 71.8
Sp2g00310 Schrenkiella parvula HOM05D007126 ORTHO05D008974 6.2e-204 714.5 503 73.4
BraA09t37117Z Brassica rapa HOM05D007126 ORTHO05D008974 8.1e-204 714.1 503 72.6
A09p14710 Brassica napus HOM05D007126 ORTHO05D008974 1.1e-203 713.8 503 73.0
BcaB07g31464 Brassica carinata HOM05D007126 ORTHO05D008974 1.8e-203 713.0 503 73.0
Aa31LG2G1430 Aethionema arabicum HOM05D007126 ORTHO05D008974 2.4e-203 712.6 564 66.8
Sc22g0004970 Simmondsia chinensis HOM05D007126 ORTHO05D008974 2.4e-203 712.6 508 71.9
BolC9t54678H Brassica oleracea HOM05D007126 ORTHO05D008974 3.1e-203 712.2 503 73.2
Solyc12g055940.3 Solanum lycopersicum HOM05D007126 ORTHO05D008974 6.9e-203 711.1 584 67.1
CARHR046500 Cardamine hirsuta HOM05D007126 ORTHO05D008974 1.2e-202 710.3 516 70.9
BcaC04g22569 Brassica carinata HOM05D007126 ORTHO05D008974 4.5e-202 708.4 503 72.8
TPR.G3456 Trifolium pratense HOM05D007126 ORTHO05D008974 2.2e-201 706.1 559 68.0
MBI06_g08479_MAGBIO Magnolia biondii HOM05D007126 ORTHO05D008974 3.8e-201 705.3 604 63.9
FvH4_5g04720 Fragaria vesca HOM05D007126 ORTHO05D008974 4.9e-201 704.9 523 72.3
AL2G10420 Arabidopsis lyrata HOM05D007126 ORTHO05D008974 1.4e-200 703.4 528 69.5
AT1G64430 Arabidopsis thaliana HOM05D007126 ORTHO05D008974 5.4e-200 701.4 528 68.9
Cc08_g16150 Coffea canephora HOM05D007126 ORTHO05D008974 1.3e-198 696.8 498 73.1
Lalb_Chr09g0332411 Lupinus albus HOM05D007126 ORTHO05D008974 3.0e-198 695.7 582 66.0
Rhsim02G0244700 Rhododendron simsii HOM05D007126 ORTHO05D008974 3.0e-198 695.7 580 67.1
Oeu009966.1 Olea europaea HOM05D007126 ORTHO05D008974 4.3e-197 691.8 556 67.1
AUR62019847 Chenopodium quinoa HOM05D007126 ORTHO05D008974 5.6e-197 691.4 535 66.2
Thhalv10023389m.g Eutrema salsugineum HOM05D007126 ORTHO05D008974 5.6e-197 691.4 504 70.8
THA.LOC104817626 Tarenaya hassleriana HOM05D007126 ORTHO05D008974 1.3e-196 690.3 547 67.5
ClCG07G011560 Citrullus lanatus HOM05D007126 ORTHO05D008974 2.1e-196 689.5 581 65.6
Lj2C166T10 Lonicera japonica HOM05D007126 ORTHO05D008974 2.1e-196 689.5 617 64.2
Lsat_1_v5_gn_3_10920 Lactuca sativa HOM05D007126 ORTHO05D008974 6.2e-196 688.0 572 66.3
AUR62010848 Chenopodium quinoa HOM05D007126 ORTHO05D008974 1.4e-195 686.8 490 70.0
Nn1g08439 Nelumbo nucifera HOM05D007126 ORTHO05D008974 4.0e-195 685.3 584 64.7
Sabra01G0067000 Salix brachista HOM05D007126 ORTHO05D008974 8.4e-193 677.6 445 80.0
DCAR_029908 Daucus carota HOM05D007126 ORTHO05D008974 4.6e-191 671.8 515 68.9
Nitab4.5_0004010g0090 Nicotiana tabacum HOM05D007126 ORTHO05D008974 8.7e-190 667.5 571 65.3
arahy.Tifrunner.gnm1.ann1.U3A0V6 Arachis hypogaea HOM05D007126 ORTHO05D008974 9.6e-189 664.1 578 63.7
C09p17800 Brassica napus HOM05D007126 ORTHO05D008974 4.8e-188 661.8 473 72.3
Hma1.2p1_0440F.1_g153360 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 2.0e-186 656.4 656 60.1
EL10Ac5g12922 Beta vulgaris HOM05D007126 ORTHO05D008974 4.3e-181 638.6 608 58.6
ATR0598G096 Amborella trichopoda HOM05D007126 ORTHO05D008974 1.1e-179 634.0 578 59.9
arahy.Tifrunner.gnm1.ann1.GEY0M8 Arachis hypogaea HOM05D007126 ORTHO05D008974 2.2e-177 626.3 599 59.8
MELO3C016299.2 Cucumis melo HOM05D007126 ORTHO05D008974 8.8e-174 614.4 536 64.4
Psat7g210120 Pisum sativum HOM05D007126 ORTHO05D008974 4.3e-173 612.1 468 67.7
Cpa.g.sc79.28 Carica papaya HOM05D007126 ORTHO05D008974 1.2e-170 604.0 470 69.6
HPP92_007857 Vanilla planifolia HOM05D007126 ORTHO05D008974 7.2e-168 594.7 533 59.5
Dinv38826 Davidia involucrata HOM05D007126 ORTHO05D008974 1.2e-167 594.0 548 62.4
Peaxi162Scf00117g01130 Petunia axillaris HOM05D007126 ORTHO05D008974 3.6e-167 592.4 560 60.2
unitig_37.g12131 Utricularia gibba HOM05D007126 ORTHO05D008974 4.1e-163 578.9 521 61.2
SalBow1G1535 Salvia bowleyana HOM05D007126 ORTHO05D008974 3.2e-160 569.3 544 60.7
vmacro11349 Vaccinium macrocarpon HOM05D007126 ORTHO05D008974 1.3e-153 547.4 633 54.8
SGA_v2.0_scaffold305G47987 Striga asiatica HOM05D007126 ORTHO05D008974 6.5e-153 545.0 567 55.9
Mapoly0029s0043 Marchantia polymorpha HOM05D007126 ORTHO05D008974 9.4e-144 514.6 501 53.3
TAR374G0215 Trochodendron aralioides HOM05D007126 ORTHO05D008974 2.7e-143 513.1 325 80.9
Zm00001eb028190 Zea mays HOM05D007126 ORTHO05D008974 3.4e-141 506.1 492 55.3
Pp3c15_17220 Physcomitrium patens HOM05D007126 ORTHO05D008974 1.1e-136 491.1 532 49.6
Phvul.002G298304 Phaseolus vulgaris HOM05D007126 ORTHO05D008974 3.3e-136 489.6 325 75.4
SMO367G1126 Selaginella moellendorffii HOM05D007126 ORTHO05D008974 4.0e-126 456.1 519 48.4
CDE08G1056 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 2.9e-124 449.9 371 62.0
CBR_g19104 Chara braunii HOM05D007126 ORTHO05D008974 6.4e-108 395.6 505 46.9
Carub.0002s0034 Capsella rubella HOM05D007126 ORTHO05D008974 1.4e-86 324.7 230 74.8
FAN18G3621 Fragaria x ananassa HOM05D007126 ORTHO05D008974 6.9e-70 269.2 245 62.9
Dinv37525 Davidia involucrata HOM05D007126 ORTHO05D008974 4.6e-66 256.5 273 56.0
FAN08G3578 Fragaria x ananassa HOM05D007126 ORTHO05D008974 6.7e-65 252.7 263 57.0
Carub.0002s0035 Capsella rubella HOM05D007126 ORTHO05D008974 7.4e-64 249.2 252 55.6
Cre14.g611950 Chlamydomonas reinhardtii HOM05D007126 ORTHO05D008974 7.2e-59 232.6 567 32.5
SEGI_23531 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 2.7e-58 230.7 199 55.8
SEGI_08908 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 5.5e-51 206.5 231 50.6
Os08g0332700 Oryza sativa ssp. japonica HOM05D007126 ORTHO05D008974 7.9e-50 202.6 246 50.8
CDE08G0877 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 6.7e-49 199.5 149 72.5
Cfa021999 Carpinus fangiana HOM05D007126 ORTHO05D008974 2.5e-43 181.0 172 61.0
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 1.4e-41 175.3 232 49.1
SEGI_34352 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 3.5e-29 134.0 111 65.8
Cpa.g.sc79.27 Carica papaya HOM05D007126 ORTHO05D008974 2.4e-22 111.3 71 88.7
FAN13G2101 Fragaria x ananassa HOM05D007126 ORTHO05D008974 6.8e-17 93.2 64 81.2
BcaC09g50327 Brassica carinata HOM05D017681 ORTHO05D019883 2.3e-09 68.2 117 35.9
BcaC04g20679 Brassica carinata HOM05D017681 ORTHO05D019883 5.2e-09 67.0 117 35.0


User provided reference genes

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