Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01019463001 Vitis vinifera HOM05D007339 ORTHO05D009302 4.1e-187 657.9 335 100.0
Cfa012282 Carpinus fangiana HOM05D007339 ORTHO05D009302 9.7e-136 487.3 362 69.3
Dinv37563 Davidia involucrata HOM05D007339 ORTHO05D009302 4.8e-135 485.0 387 64.6
COL.COLO4_21749 Corchorus olitorius HOM05D007339 ORTHO05D009302 4.5e-133 478.4 352 69.6
Gohir.D12G235400 Gossypium hirsutum HOM05D007339 ORTHO05D009302 7.7e-133 477.6 355 68.2
Gorai.008G251600 Gossypium raimondii HOM05D007339 ORTHO05D009302 2.2e-132 476.1 355 67.9
TAR629G0408 Trochodendron aralioides HOM05D007339 ORTHO05D009302 5.5e-131 471.5 351 68.7
QL02p032076 Quercus lobata HOM05D007339 ORTHO05D009302 2.7e-130 469.2 358 67.6
Nn1g08390 Nelumbo nucifera HOM05D007339 ORTHO05D009302 3.6e-130 468.8 361 65.1
FAN08G0386 Fragaria x ananassa HOM05D007339 ORTHO05D009302 4.6e-130 468.4 357 66.9
CSS0003086 Camellia sinensis var. sinensis HOM05D007339 ORTHO05D009302 1.8e-129 466.5 360 65.3
Potri.003G135200 Populus trichocarpa HOM05D007339 ORTHO05D009302 1.8e-129 466.5 360 66.4
Actinidia01410 Actinidia chinensis HOM05D007339 ORTHO05D009302 6.7e-129 464.5 343 69.4
FAN04G0801 Fragaria x ananassa HOM05D007339 ORTHO05D009302 6.7e-129 464.5 357 66.4
MD14G1117300 Malus domestica HOM05D007339 ORTHO05D009302 8.8e-129 464.2 357 65.3
CANSAT21G2628 Cannabis sativa HOM05D007339 ORTHO05D009302 1.1e-128 463.8 362 65.2
TWI60G1048 Tripterygium wilfordii HOM05D007339 ORTHO05D009302 9.7e-128 460.7 352 65.1
Sabra03G0097300 Salix brachista HOM05D007339 ORTHO05D009302 1.3e-127 460.3 360 65.6
DCAR_027743 Daucus carota HOM05D007339 ORTHO05D009302 3.1e-126 455.7 356 64.6
Glyma.05G213600 Glycine max HOM05D007339 ORTHO05D009302 9.1e-126 454.1 355 65.1
Oeu008834.1 Olea europaea HOM05D007339 ORTHO05D009302 5.9e-125 451.4 355 63.4
FAN13G2341 Fragaria x ananassa HOM05D007339 ORTHO05D009302 1.7e-124 449.9 357 65.5
Rhsim02G0238900 Rhododendron simsii HOM05D007339 ORTHO05D009302 1.7e-124 449.9 351 63.8
Lalb_Chr05g0224341 Lupinus albus HOM05D007339 ORTHO05D009302 3.8e-124 448.7 357 63.0
vmacro11423 Vaccinium macrocarpon HOM05D007339 ORTHO05D009302 8.5e-124 447.6 350 64.3
arahy.Tifrunner.gnm1.ann1.XUAZ2L Arachis hypogaea HOM05D007339 ORTHO05D009302 1.1e-123 447.2 351 64.7
arahy.Tifrunner.gnm1.ann1.3U28WJ Arachis hypogaea HOM05D007339 ORTHO05D009302 1.4e-123 446.8 351 64.7
Lj4g0000586 Lotus japonicus HOM05D007339 ORTHO05D009302 4.2e-123 445.3 358 63.7
LjContig00001g0019220 Lotus japonicus HOM05D007339 ORTHO05D009302 4.2e-123 445.3 358 63.7
LjContig00001g0022561 Lotus japonicus HOM05D007339 ORTHO05D009302 4.2e-123 445.3 358 63.7
Cpa.g.c31793 Carica papaya HOM05D007339 ORTHO05D009302 7.2e-123 444.5 353 64.0
Eucgr.D01785 Eucalyptus grandis HOM05D007339 ORTHO05D009302 1.2e-122 443.7 358 62.8
VMungo0251G0376 Vigna mungo HOM05D007339 ORTHO05D009302 1.4e-121 440.3 357 62.7
Gohir.A12G231900 Gossypium hirsutum HOM05D007339 ORTHO05D009302 3.9e-121 438.7 315 70.2
Phvul.002G295000 Phaseolus vulgaris HOM05D007339 ORTHO05D009302 3.9e-121 438.7 357 62.7
Haze_08703 Corylus avellana HOM05D007339 ORTHO05D009302 4.4e-120 435.3 362 64.6
Cc08_g15580 Coffea canephora HOM05D007339 ORTHO05D009302 7.4e-120 434.5 352 63.6
arahy.Tifrunner.gnm1.ann1.CS5PRD Arachis hypogaea HOM05D007339 ORTHO05D009302 9.7e-120 434.1 351 62.4
Thecc.03G290600 Theobroma cacao HOM05D007339 ORTHO05D009302 1.7e-119 433.3 315 68.9
AUR62019785 Chenopodium quinoa HOM05D007339 ORTHO05D009302 2.8e-119 432.6 348 63.5
CsaV3_2G033870 Cucumis sativus L. HOM05D007339 ORTHO05D009302 3.7e-119 432.2 350 62.3
Prupe.5G112000 Prunus persica HOM05D007339 ORTHO05D009302 4.8e-119 431.8 338 65.4
PGR031G1180 Punica granatum HOM05D007339 ORTHO05D009302 8.2e-119 431.0 361 59.6
EL10Ac5g12862 Beta vulgaris HOM05D007339 ORTHO05D009302 1.4e-118 430.3 351 62.7
Manes.02G014000 Manihot esculenta HOM05D007339 ORTHO05D009302 1.4e-118 430.3 315 69.2
Lsat_1_v5_gn_3_9640 Lactuca sativa HOM05D007339 ORTHO05D009302 1.8e-118 429.9 351 61.0
RcHm_v2.0_Chr7g0195891 Rosa chinensis HOM05D007339 ORTHO05D009302 3.1e-118 429.1 314 68.2
FAN13G1997 Fragaria x ananassa HOM05D007339 ORTHO05D009302 3.5e-117 425.6 357 62.7
Sed0025077 Sechium edule HOM05D007339 ORTHO05D009302 3.5e-117 425.6 356 62.4
AUR62010789 Chenopodium quinoa HOM05D007339 ORTHO05D009302 4.5e-117 425.2 348 62.9
Ca_17504_v3 Cicer arietinum L. HOM05D007339 ORTHO05D009302 5.9e-117 424.9 354 60.5
MELO3C008161.2 Cucumis melo HOM05D007339 ORTHO05D009302 7.7e-117 424.5 356 61.0
Hund14247 Selenicereus undatus HOM05D007339 ORTHO05D009302 7.7e-117 424.5 350 62.0
ClCG11G007690 Citrullus lanatus HOM05D007339 ORTHO05D009302 1.7e-116 423.3 356 61.2
Sopen12g028660 Solanum pennellii HOM05D007339 ORTHO05D009302 2.2e-116 422.9 353 59.8
MBI11_g02478_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 5.0e-116 421.8 395 57.0
Migut.E01224 Erythranthe guttata HOM05D007339 ORTHO05D009302 6.5e-116 421.4 353 61.8
Solyc12g056150.2 Solanum lycopersicum HOM05D007339 ORTHO05D009302 8.5e-116 421.0 353 60.1
PGSC0003DMG400005010 Solanum tuberosum HOM05D007339 ORTHO05D009302 8.5e-116 421.0 353 60.1
MBI11_g07997_MAGBIO Magnolia biondii HOM05D007339 ORTHO05D009302 1.5e-115 420.2 413 54.5
Lj2A174T87 Lonicera japonica HOM05D007339 ORTHO05D009302 1.9e-115 419.9 334 65.3
Medtr8g099160 Medicago truncatula HOM05D007339 ORTHO05D009302 3.2e-115 419.1 357 60.2
Sc01g0010030 Simmondsia chinensis HOM05D007339 ORTHO05D009302 3.2e-115 419.1 355 61.1
CiPaw.11G126100 Carya illinoinensis HOM05D007339 ORTHO05D009302 3.6e-114 415.6 338 61.5
ECA246G1762 Erigeron canadensis HOM05D007339 ORTHO05D009302 3.6e-114 415.6 351 59.3
SalBow1G6752 Salvia bowleyana HOM05D007339 ORTHO05D009302 6.1e-114 414.8 351 59.0
Peaxi162Scf00117g01517 Petunia axillaris HOM05D007339 ORTHO05D009302 8.0e-114 414.5 334 61.7
Psat7g028320 Pisum sativum HOM05D007339 ORTHO05D009302 1.0e-113 414.1 351 58.7
HanXRQChr17g0535521 Helianthus annuus HOM05D007339 ORTHO05D009302 1.4e-113 413.7 351 59.3
CAN.G868.7 Capsicum annuum HOM05D007339 ORTHO05D009302 5.2e-113 411.8 351 59.0
CDE03G0219 Ceratophyllum demersum HOM05D007339 ORTHO05D009302 1.1e-110 404.1 353 58.4
Nitab4.5_0002381g0050 Nicotiana tabacum HOM05D007339 ORTHO05D009302 1.8e-110 403.3 328 61.9
unitig_22.g6184 Utricularia gibba HOM05D007339 ORTHO05D009302 3.8e-108 395.6 351 57.5
Ah.07g196890 Amaranthus hybridus HOM05D007339 ORTHO05D009302 4.0e-105 385.6 314 61.8
Eucgr.D01783 Eucalyptus grandis HOM05D007339 ORTHO05D009302 4.0e-105 385.6 314 61.1
ATR0585G140 Amborella trichopoda HOM05D007339 ORTHO05D009302 6.8e-105 384.8 351 55.3
Duzib068G0257 Durio zibethinus HOM05D007339 ORTHO05D009302 1.5e-104 383.6 282 69.1
Nitab4.5_0004603g0010 Nicotiana tabacum HOM05D007339 ORTHO05D009302 9.1e-102 374.4 330 59.1
HPP92_020016 Vanilla planifolia HOM05D007339 ORTHO05D009302 2.7e-101 372.9 357 53.2
Zm00001eb119650 Zea mays HOM05D007339 ORTHO05D009302 7.7e-101 371.3 354 52.3
SGA_v2.0_scaffold111G31453 Striga asiatica HOM05D007339 ORTHO05D009302 2.7e-93 346.3 323 56.3
QL02p032031 Quercus lobata HOM05D007339 ORTHO05D009302 5.9e-85 318.5 224 69.2
Eucgr.D01784 Eucalyptus grandis HOM05D007339 ORTHO05D009302 3.1e-81 306.2 328 50.9
Atru.chr9.2070 Acer truncatum HOM05D007339 ORTHO05D009302 1.3e-76 290.8 230 65.7
AagrBONN_evm.TU.Sc2ySwM_362.1772 Anthoceros agrestis HOM05D007339 ORTHO05D009302 3.3e-75 286.2 330 47.0
Pp3c9_13440 Physcomitrium patens HOM05D007339 ORTHO05D009302 1.6e-74 283.9 343 44.6
Mapoly0105s0048 Marchantia polymorpha HOM05D007339 ORTHO05D009302 1.8e-73 280.4 334 43.4
SMO340G0099 Selaginella moellendorffii HOM05D007339 ORTHO05D009302 1.1e-65 254.6 335 42.7
TPR.G3408 Trifolium pratense HOM05D007339 ORTHO05D009302 1.0e-60 238.0 177 65.0
Atru.chr9.2069 Acer truncatum HOM05D007339 ORTHO05D009302 6.6e-60 235.3 300 49.0
Glyma.08G020200 Glycine max HOM05D007339 ORTHO05D009302 1.9e-54 217.2 212 57.1
CBR_g55541 Chara braunii HOM05D007339 ORTHO05D009302 1.3e-44 184.5 477 29.4
TPR.G11473 Trifolium pratense HOM05D007339 ORTHO05D009302 1.9e-43 180.6 178 53.4
SEGI_02509 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.0e-40 170.6 130 60.8
SEGI_37819 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.0e-40 170.6 130 60.8
AagrBONN_evm.TU.Sc2ySwM_368.3145 Anthoceros agrestis HOM05D007339 ORTHO05D009302 8.4e-31 138.7 167 45.5
SEGI_02101 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 2.9e-23 113.6 121 51.2
Cre06.g285001 Chlamydomonas reinhardtii HOM05D007339 ORTHO05D009302 5.5e-22 109.4 257 32.7
SEGI_11472 Sequoiadendron giganteum HOM05D007339 ORTHO05D009302 3.9e-20 103.2 87 54.0
Sc20g0000110 Simmondsia chinensis HOM05D007339 ORTHO05D009302 5.3e-17 92.8 86 46.5
QL02p032024 Quercus lobata HOM05D007339 ORTHO05D009302 1.2e-16 91.7 75 61.3
Os01g0221900 Oryza sativa ssp. japonica HOM05D007339 ORTHO05D009302 2.0e-16 90.9 87 42.5
Rhsim12G0211900 Rhododendron simsii HOM05D003090 ORTHO05D003495 9.1e-09 65.5 57 59.6


User provided reference genes

Program Settings