Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01019144001 Vitis vinifera HOM05D006824 ORTHO05D008779 1.3e-125 453.0 217 100.0
CSS0012922 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 1.5e-100 369.8 199 84.9
CSS0029100 Camellia sinensis var. sinensis HOM05D006824 ORTHO05D008779 1.5e-100 369.8 199 84.9
Actinidia38928 Actinidia chinensis HOM05D006824 ORTHO05D008779 3.0e-98 362.1 201 82.1
Rhsim03G0265800 Rhododendron simsii HOM05D006824 ORTHO05D008779 8.8e-98 360.5 207 81.2
Lj8A196G47 Lonicera japonica HOM05D006824 ORTHO05D008779 1.2e-97 360.1 216 78.7
Dinv04348 Davidia involucrata HOM05D006824 ORTHO05D008779 1.5e-97 359.8 206 81.1
RcHm_v2.0_Chr3g0448181 Rosa chinensis HOM05D006824 ORTHO05D008779 3.7e-96 355.1 216 76.4
FAN05G0802 Fragaria x ananassa HOM05D006824 ORTHO05D008779 6.3e-96 354.4 208 77.9
Haze_04530 Corylus avellana HOM05D006824 ORTHO05D008779 8.3e-96 354.0 206 78.2
vmacro06000 Vaccinium macrocarpon HOM05D006824 ORTHO05D008779 1.2e-94 350.1 210 78.6
Nitab4.5_0005183g0030 Nicotiana tabacum HOM05D006824 ORTHO05D008779 4.5e-94 348.2 209 74.6
Thecc.05G206500 Theobroma cacao HOM05D006824 ORTHO05D008779 5.9e-94 347.8 212 74.5
CAN.G694.18 Capsicum annuum HOM05D006824 ORTHO05D008779 1.0e-93 347.1 196 79.1
MD12G1258900 Malus domestica HOM05D006824 ORTHO05D008779 1.3e-93 346.7 210 73.8
TAR362G0347 Trochodendron aralioides HOM05D006824 ORTHO05D008779 1.3e-93 346.7 214 76.6
CANSAT54G2581 Cannabis sativa HOM05D006824 ORTHO05D008779 2.9e-93 345.5 218 74.3
Atru.chr12.2132 Acer truncatum HOM05D006824 ORTHO05D008779 5.0e-93 344.7 211 74.9
Prupe.6G359400 Prunus persica HOM05D006824 ORTHO05D008779 6.6e-93 344.4 216 74.1
Oeu010150.1 Olea europaea HOM05D006824 ORTHO05D008779 1.1e-92 343.6 211 74.4
Medtr7g079530 Medicago truncatula HOM05D006824 ORTHO05D008779 1.5e-92 343.2 210 74.3
PGSC0003DMG400023472 Solanum tuberosum HOM05D006824 ORTHO05D008779 2.5e-92 342.4 214 72.9
TPR.G28449 Trifolium pratense HOM05D006824 ORTHO05D008779 4.3e-92 341.7 212 74.1
HanXRQChr11g0323941 Helianthus annuus HOM05D006824 ORTHO05D008779 9.5e-92 340.5 209 74.2
Duzib128G1599 Durio zibethinus HOM05D006824 ORTHO05D008779 1.2e-91 340.1 211 73.9
Sopen05g034220 Solanum pennellii HOM05D006824 ORTHO05D008779 4.7e-91 338.2 211 73.9
CiPaw.08G117600 Carya illinoinensis HOM05D006824 ORTHO05D008779 8.0e-91 337.4 211 72.0
Cc09_g03430 Coffea canephora HOM05D006824 ORTHO05D008779 1.0e-90 337.0 214 75.2
Psat3g104840 Pisum sativum HOM05D006824 ORTHO05D008779 1.0e-90 337.0 210 72.9
ClCG11G010940 Citrullus lanatus HOM05D006824 ORTHO05D008779 1.4e-90 336.7 209 73.2
AUR62000332 Chenopodium quinoa HOM05D006824 ORTHO05D008779 3.0e-90 335.5 215 70.2
Manes.14G158930 Manihot esculenta HOM05D006824 ORTHO05D008779 3.0e-90 335.5 203 75.4
Potri.010G143000 Populus trichocarpa HOM05D006824 ORTHO05D008779 3.0e-90 335.5 197 77.7
TWI14G0776 Tripterygium wilfordii HOM05D006824 ORTHO05D008779 3.0e-90 335.5 198 77.3
ECA232G2571 Erigeron canadensis HOM05D006824 ORTHO05D008779 4.0e-90 335.1 210 72.9
Lsat_1_v5_gn_9_48761 Lactuca sativa HOM05D006824 ORTHO05D008779 6.8e-90 334.3 207 74.4
Phvul.008G055700 Phaseolus vulgaris HOM05D006824 ORTHO05D008779 6.8e-90 334.3 216 71.3
Lalb_Chr19g0126751 Lupinus albus HOM05D006824 ORTHO05D008779 8.9e-90 334.0 198 74.7
VMungo1383G3541 Vigna mungo HOM05D006824 ORTHO05D008779 8.9e-90 334.0 216 71.3
AUR62006674 Chenopodium quinoa HOM05D006824 ORTHO05D008779 2.0e-89 332.8 215 69.3
Gohir.A02G138800 Gossypium hirsutum HOM05D006824 ORTHO05D008779 2.0e-89 332.8 207 73.9
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 4.4e-89 331.6 213 71.8
Gorai.003G050700 Gossypium raimondii HOM05D006824 ORTHO05D008779 5.7e-89 331.3 207 73.9
FAN02G3690 Fragaria x ananassa HOM05D006824 ORTHO05D008779 9.8e-89 330.5 211 72.5
CsaV3_2G009540 Cucumis sativus L. HOM05D006824 ORTHO05D008779 1.3e-88 330.1 205 72.2
PSO170G6807 Papaver somniferum HOM05D006824 ORTHO05D008779 2.2e-88 329.3 208 70.2
THA.LOC104813550 Tarenaya hassleriana HOM05D006824 ORTHO05D008779 2.2e-88 329.3 201 70.1
Ca_07965_v3 Cicer arietinum L. HOM05D006824 ORTHO05D008779 2.9e-88 328.9 209 71.3
Sed0011929 Sechium edule HOM05D006824 ORTHO05D008779 3.7e-88 328.6 196 76.0
Glyma.09G252100 Glycine max HOM05D006824 ORTHO05D008779 8.3e-88 327.4 196 75.5
CDE09G0666 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 2.4e-87 325.9 208 72.6
PGR031G0982 Punica granatum HOM05D006824 ORTHO05D008779 2.4e-87 325.9 216 67.1
DCAR_005505 Daucus carota HOM05D006824 ORTHO05D008779 3.2e-87 325.5 211 67.8
Glyma.18G240500 Glycine max HOM05D006824 ORTHO05D008779 3.2e-87 325.5 211 71.6
Sabra10G0110900 Salix brachista HOM05D006824 ORTHO05D008779 3.2e-87 325.5 198 74.7
Aqoxy5G00154 Aquilegia oxysepala HOM05D006824 ORTHO05D008779 4.1e-87 325.1 209 72.2
EL10Ac4g09985 Beta vulgaris HOM05D006824 ORTHO05D008779 9.2e-87 323.9 222 68.0
A07p26320 Brassica napus HOM05D006824 ORTHO05D008779 1.2e-86 323.6 213 69.0
FAN14G1847 Fragaria x ananassa HOM05D006824 ORTHO05D008779 1.2e-86 323.6 202 73.8
BraA07t30276Z Brassica rapa HOM05D006824 ORTHO05D008779 2.0e-86 322.8 213 69.0
C06p28710 Brassica napus HOM05D006824 ORTHO05D008779 4.6e-86 321.6 213 69.0
SalBow3G1586 Salvia bowleyana HOM05D006824 ORTHO05D008779 7.8e-86 320.9 244 63.5
Aa31LG4G40 Aethionema arabicum HOM05D006824 ORTHO05D008779 1.7e-85 319.7 199 72.9
Eucgr.H01379 Eucalyptus grandis HOM05D006824 ORTHO05D008779 2.3e-85 319.3 197 73.6
arahy.Tifrunner.gnm1.ann1.3Y20MY Arachis hypogaea HOM05D006824 ORTHO05D008779 3.0e-85 318.9 195 73.3
CDE02G0053 Ceratophyllum demersum HOM05D006824 ORTHO05D008779 3.9e-85 318.5 210 70.5
arahy.Tifrunner.gnm1.ann1.8HY0WZ Arachis hypogaea HOM05D006824 ORTHO05D008779 6.6e-85 317.8 195 72.8
Sp5g35980 Schrenkiella parvula HOM05D006824 ORTHO05D008779 6.6e-85 317.8 209 68.4
SGA_v2.0_scaffold13G06472 Striga asiatica HOM05D006824 ORTHO05D008779 8.6e-85 317.4 201 71.6
AL2G41760 Arabidopsis lyrata HOM05D006824 ORTHO05D008779 1.9e-84 316.2 196 73.0
CARHR049030 Cardamine hirsuta HOM05D006824 ORTHO05D008779 5.6e-84 314.7 210 69.0
Thhalv10019052m.g Eutrema salsugineum HOM05D006824 ORTHO05D008779 9.5e-84 313.9 196 71.4
Migut.F01795 Erythranthe guttata HOM05D006824 ORTHO05D008779 1.0e-82 310.5 197 71.6
BolC6t38040H Brassica oleracea HOM05D006824 ORTHO05D008779 1.4e-82 310.1 236 61.9
Carub.0002s2772 Capsella rubella HOM05D006824 ORTHO05D008779 1.4e-82 310.1 205 69.8
HPP92_009935 Vanilla planifolia HOM05D006824 ORTHO05D008779 5.8e-81 304.7 175 77.1
Ciclev10012732m.g Citrus clementina HOM05D006824 ORTHO05D008779 7.0e-79 297.7 166 80.1
AT1G79790 Arabidopsis thaliana HOM05D006824 ORTHO05D008779 1.2e-78 297.0 231 61.5
Nn1g09799 Nelumbo nucifera HOM05D006824 ORTHO05D008779 1.2e-78 297.0 175 78.3
Cpa.g.sc123.9 Carica papaya HOM05D006824 ORTHO05D008779 7.8e-78 294.3 176 74.4
Lj1g0017863 Lotus japonicus HOM05D006824 ORTHO05D008779 5.6e-76 288.1 177 72.3
Ah.06g195550 Amaranthus hybridus HOM05D006824 ORTHO05D008779 3.1e-74 282.3 196 69.9
MELO3C025302.2 Cucumis melo HOM05D006824 ORTHO05D008779 4.0e-74 282.0 172 72.1
MELO3C008753.2 Cucumis melo HOM05D006824 ORTHO05D008779 1.2e-73 280.4 182 70.9
MBI08_g02107_MAGBIO Magnolia biondii HOM05D006824 ORTHO05D008779 3.2e-71 272.3 168 72.0
Nitab4.5_0009285g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 1.9e-68 263.1 172 70.3
SMO361G0474 Selaginella moellendorffii HOM05D006824 ORTHO05D008779 2.5e-68 262.7 210 60.5
FvH4_6g00710 Fragaria vesca HOM05D006824 ORTHO05D008779 8.9e-66 254.2 148 79.1
Pp3c3_9990 Physcomitrium patens HOM05D006824 ORTHO05D008779 2.9e-64 249.2 192 56.8
AagrBONN_evm.TU.Sc2ySwM_344.3559 Anthoceros agrestis HOM05D006824 ORTHO05D008779 8.4e-64 247.7 205 54.1
CBR_g54655 Chara braunii HOM05D006824 ORTHO05D008779 5.4e-63 245.0 215 51.2
Hma1.2p1_0171F.1_g075760 Hydrangea macrophylla HOM05D006824 ORTHO05D008779 2.7e-62 242.7 133 82.0
SalBow3G1143 Salvia bowleyana HOM05D006824 ORTHO05D008779 2.7e-62 242.7 165 68.5
Mapoly0002s0020 Marchantia polymorpha HOM05D006824 ORTHO05D008779 6.0e-62 241.5 193 53.9
Gohir.D03G049300 Gossypium hirsutum HOM05D006824 ORTHO05D008779 8.6e-61 237.7 155 72.3
Zm00001eb169290 Zea mays HOM05D006824 ORTHO05D008779 6.2e-59 231.5 135 74.8
Nitab4.5_0008294g0020 Nicotiana tabacum HOM05D006824 ORTHO05D008779 4.0e-50 202.2 209 51.7
QL01p046721 Quercus lobata HOM05D006824 ORTHO05D008779 9.0e-50 201.1 121 76.9
Cre13.g563200 Chlamydomonas reinhardtii HOM05D006824 ORTHO05D008779 1.9e-47 193.4 200 48.5
MD04G1242100 Malus domestica HOM05D006824 ORTHO05D008779 9.3e-47 191.0 127 69.3
Hund07329 Selenicereus undatus HOM05D006824 ORTHO05D008779 5.1e-45 185.3 194 49.0
arahy.Tifrunner.gnm1.ann1.EIZA4A Arachis hypogaea HOM05D006824 ORTHO05D008779 1.3e-43 180.6 104 74.0
arahy.Tifrunner.gnm1.ann1.JEI8NT Arachis hypogaea HOM05D006824 ORTHO05D008779 3.9e-37 159.1 93 71.0
PRCOL_00006210 Prasinoderma coloniale HOM05D006824 ORTHO05D008779 9.6e-36 154.5 182 39.6
FAN09G4644 Fragaria x ananassa HOM05D006824 ORTHO05D008779 6.9e-34 148.3 81 82.7
Solyc05g055820.3 Solanum lycopersicum HOM05D006824 ORTHO05D008779 4.2e-31 139.0 87 69.0
CARHR074720 Cardamine hirsuta HOM05D006824 ORTHO05D008779 3.1e-26 122.9 87 63.2
MD04G1242000 Malus domestica HOM05D006824 ORTHO05D008779 8.5e-24 114.8 64 76.6
Psat3g104160 Pisum sativum HOM05D006824 ORTHO05D008779 6.3e-19 98.6 60 73.3
ATR0824G111 Amborella trichopoda HOM05D006824 ORTHO05D008779 8.2e-19 98.2 78 61.5
arahy.Tifrunner.gnm1.ann1.X7EDXL Arachis hypogaea HOM05D006824 ORTHO05D021501 3.1e-18 96.3 54 81.5
SEGI_14412 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 2.6e-17 93.2 53 77.4
ATR0263G001 Amborella trichopoda HOM05D006824 ORTHO05D008779 7.7e-17 91.7 68 64.7
FAN09G1422 Fragaria x ananassa HOM05D001170 ORTHO05D002759 2.1e-14 83.6 54 63.0
arahy.Tifrunner.gnm1.ann1.2JVF5K Arachis hypogaea HOM05D001175 ORTHO05D021501 3.9e-13 79.3 91 49.5
arahy.Tifrunner.gnm1.ann1.96LZZJ Arachis hypogaea HOM05D006824 ORTHO05D021501 3.9e-13 79.3 91 49.5
arahy.Tifrunner.gnm1.ann1.DM3ST4 Arachis hypogaea HOM05D006824 ORTHO05D021501 3.9e-13 79.3 91 49.5
arahy.Tifrunner.gnm1.ann1.LN2II4 Arachis hypogaea HOM05D006661 ORTHO05D021501 1.1e-12 77.8 90 48.9
SEGI_33071 Sequoiadendron giganteum HOM05D006824 ORTHO05D008779 5.7e-12 75.5 74 47.3
arahy.Tifrunner.gnm1.ann1.0X0W56 Arachis hypogaea HOM05D006824 ORTHO05D021501 1.1e-10 71.2 40 77.5
Cpa.g.sc32.161 Carica papaya HOM05D006824 ORTHO05D008779 7.2e-07 58.5 33 72.7


User provided reference genes

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