Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01019143001 Vitis vinifera HOM05D007619 ORTHO05D009522 6.6e-171 604.0 310 100.0
Manes.09G184300 Manihot esculenta HOM05D007619 ORTHO05D009522 5.7e-90 335.1 315 62.2
Thecc.05G206200 Theobroma cacao HOM05D007619 ORTHO05D009522 7.4e-90 334.7 324 59.0
TAR633G2353 Trochodendron aralioides HOM05D007619 ORTHO05D009522 2.6e-87 326.2 313 60.1
Gorai.004G260400 Gossypium raimondii HOM05D007619 ORTHO05D009522 1.1e-85 320.9 324 56.2
Gohir.1Z049672 Gossypium hirsutum HOM05D007619 ORTHO05D009522 5.5e-85 318.5 324 55.9
Gohir.D08G244101 Gossypium hirsutum HOM05D007619 ORTHO05D009522 5.5e-85 318.5 324 55.9
RcHm_v2.0_Chr3g0448201 Rosa chinensis HOM05D007619 ORTHO05D009522 1.2e-84 317.4 330 57.0
Atru.chr12.2107 Acer truncatum HOM05D007619 ORTHO05D009522 3.0e-83 312.8 302 60.9
Ciclev10012185m.g Citrus clementina HOM05D007619 ORTHO05D009522 3.9e-83 312.4 327 56.0
Cfa006282 Carpinus fangiana HOM05D007619 ORTHO05D009522 3.3e-82 309.3 320 56.6
Haze_04528 Corylus avellana HOM05D007619 ORTHO05D009522 8.2e-81 304.7 320 56.6
Eucgr.C02023 Eucalyptus grandis HOM05D007619 ORTHO05D009522 1.8e-80 303.5 314 55.7
Hma1.2p1_0220F.1_g093010 Hydrangea macrophylla HOM05D007619 ORTHO05D009522 5.3e-80 302.0 286 59.8
MD04G1241800 Malus domestica HOM05D007619 ORTHO05D009522 5.3e-80 302.0 336 53.9
Psat4g220960 Pisum sativum HOM05D007619 ORTHO05D009522 1.2e-79 300.8 311 55.0
Nn7g37654 Nelumbo nucifera HOM05D007619 ORTHO05D009522 1.0e-78 297.7 313 56.2
Ca_09970_v3 Cicer arietinum L. HOM05D007619 ORTHO05D009522 1.7e-78 297.0 321 55.1
COL.COLO4_19831 Corchorus olitorius HOM05D006824 ORTHO05D008779 2.9e-78 296.2 298 58.4
Glyma.10G170300 Glycine max HOM05D007619 ORTHO05D009522 9.4e-77 291.2 310 54.5
Phvul.010G077712 Phaseolus vulgaris HOM05D007619 ORTHO05D009522 1.6e-76 290.4 316 53.8
TPR.G14653 Trifolium pratense HOM05D007619 ORTHO05D009522 2.1e-76 290.0 312 54.5
PSO017G6303 Papaver somniferum HOM05D007619 ORTHO05D009522 3.6e-76 289.3 312 53.8
Glyma.20G219700 Glycine max HOM05D007619 ORTHO05D009522 4.7e-76 288.9 324 52.5
Aqoxy2G03954 Aquilegia oxysepala HOM05D007619 ORTHO05D009522 2.3e-75 286.6 323 53.6
Lalb_Chr21g0311391 Lupinus albus HOM05D007619 ORTHO05D009522 2.3e-75 286.6 303 54.5
Lalb_Chr02g0149381 Lupinus albus HOM05D007619 ORTHO05D009522 3.0e-75 286.2 307 54.1
Medtr1g078380 Medicago truncatula HOM05D007619 ORTHO05D009522 2.8e-73 279.6 304 53.3
vmacro10399 Vaccinium macrocarpon HOM05D007619 ORTHO05D009522 6.3e-73 278.5 325 52.3
Sc09g0001560 Simmondsia chinensis HOM05D007619 ORTHO05D009522 1.1e-72 277.7 313 52.7
FAN09G3963 Fragaria x ananassa HOM05D007619 ORTHO05D009522 2.4e-72 276.6 397 44.8
VMungo0720G2770 Vigna mungo HOM05D007619 ORTHO05D009522 2.4e-72 276.6 341 49.9
FAN14G0392 Fragaria x ananassa HOM05D007619 ORTHO05D009522 5.3e-72 275.4 378 47.6
Potri.013G087300 Populus trichocarpa HOM05D007619 ORTHO05D009522 4.5e-71 272.3 307 54.4
ClCG11G010990 Citrullus lanatus HOM05D007619 ORTHO05D009522 1.3e-70 270.8 303 54.1
TPR.G14659 Trifolium pratense HOM05D007619 ORTHO05D009522 2.9e-70 269.6 304 52.3
arahy.Tifrunner.gnm1.ann1.YK6SIT Arachis hypogaea HOM05D007619 ORTHO05D009522 3.8e-70 269.2 307 52.8
arahy.Tifrunner.gnm1.ann1.P2W93U Arachis hypogaea HOM05D007619 ORTHO05D009522 1.1e-69 267.7 307 51.8
Lsat_1_v5_gn_2_17180 Lactuca sativa HOM05D007619 ORTHO05D009522 1.5e-69 267.3 301 50.2
Cc09_g03420 Coffea canephora HOM05D007619 ORTHO05D009522 2.5e-69 266.5 322 49.7
MBI11_g04278_MAGBIO Magnolia biondii HOM05D007619 ORTHO05D009522 2.5e-69 266.5 318 50.3
EL10Ac4g09950 Beta vulgaris HOM05D007619 ORTHO05D009522 1.2e-68 264.2 298 51.7
FAN05G3312 Fragaria x ananassa HOM05D007619 ORTHO05D009522 1.2e-68 264.2 405 43.0
PGSC0003DMG400023471 Solanum tuberosum HOM05D007619 ORTHO05D009522 1.2e-68 264.2 303 48.5
Peaxi162Scf00156g00417 Petunia axillaris HOM05D007619 ORTHO05D009522 1.6e-68 263.8 305 49.8
Sopen05g034230 Solanum pennellii HOM05D007619 ORTHO05D009522 1.6e-68 263.8 306 48.7
AUR62000347 Chenopodium quinoa HOM05D000031 ORTHO05D009522 2.1e-68 263.5 319 48.9
Solyc05g055830.3 Solanum lycopersicum HOM05D007619 ORTHO05D009522 2.1e-68 263.5 303 48.5
Duzib128G0301 Durio zibethinus HOM05D007619 ORTHO05D009522 1.0e-67 261.2 290 53.1
Hund27507 Selenicereus undatus HOM05D007619 ORTHO05D009522 2.3e-67 260.0 323 49.5
Gohir.A08G223800 Gossypium hirsutum HOM05D007619 ORTHO05D009522 4.0e-67 259.2 304 50.7
CAN.G694.14 Capsicum annuum HOM05D007619 ORTHO05D009522 1.5e-66 257.3 292 49.3
MELO3C008758.2 Cucumis melo HOM05D007619 ORTHO05D009522 1.5e-66 257.3 312 50.0
CiPaw.08G116400 Carya illinoinensis HOM05D007619 ORTHO05D009522 3.7e-65 252.7 270 53.3
Prupe.6G359200 Prunus persica HOM05D007619 ORTHO05D009522 8.3e-65 251.5 274 55.5
CsaV3_2G009500 Cucumis sativus L. HOM05D007619 ORTHO05D009522 4.1e-64 249.2 312 49.7
Ah.06g195590 Amaranthus hybridus HOM05D000031 ORTHO05D000030 2.7e-63 246.5 296 50.3
Actinidia34778 Actinidia chinensis HOM05D007619 ORTHO05D009522 8.6e-62 241.5 165 71.5
FAN02G4130 Fragaria x ananassa HOM05D007619 ORTHO05D009522 2.1e-60 236.9 330 45.8
ECA238G3388 Erigeron canadensis HOM05D000092 ORTHO05D000042 8.0e-60 235.0 282 49.6
HanXRQChr07g0190091 Helianthus annuus HOM05D007619 ORTHO05D009522 4.0e-59 232.6 193 60.6
Hund21888 Selenicereus undatus HOM05D007619 ORTHO05D009522 1.5e-58 230.7 275 50.5
AUR62006691 Chenopodium quinoa HOM05D007619 ORTHO05D009522 3.4e-58 229.6 310 46.5
SGA_v2.0_scaffold340G49291 Striga asiatica HOM05D007619 ORTHO05D009522 5.7e-58 228.8 304 47.7
Lj5g0000048 Lotus japonicus HOM05D007619 ORTHO05D009522 9.8e-58 228.0 273 50.9
MSTRG.27407 Avicennia marina HOM05D007619 ORTHO05D009522 1.3e-57 227.6 319 43.9
CDE07G1839 Ceratophyllum demersum HOM05D007619 ORTHO05D009522 4.1e-56 222.6 187 62.0
CDE04G2379 Ceratophyllum demersum HOM05D007619 ORTHO05D009522 7.0e-56 221.9 328 47.9
Sed0001247 Sechium edule HOM05D007619 ORTHO05D009522 2.3e-54 216.9 257 52.9
Rhsim09G0130800 Rhododendron simsii HOM05D003215 ORTHO05D003735 1.5e-53 214.2 374 40.4
PSO675G7165 Papaver somniferum HOM05D007619 ORTHO05D009522 9.5e-53 211.5 266 47.0
Nitab4.5_0009285g0010 Nicotiana tabacum HOM05D007619 ORTHO05D009522 2.1e-52 210.3 294 44.9
Migut.F01883 Erythranthe guttata HOM05D007619 ORTHO05D009522 2.8e-52 209.9 287 46.3
Nitab4.5_0005183g0010 Nicotiana tabacum HOM05D007619 ORTHO05D009522 5.8e-50 202.2 292 43.8
HPP92_024640 Vanilla planifolia HOM05D001334 ORTHO05D001119 3.5e-47 193.0 262 45.4
Zm00001eb394570 Zea mays HOM05D007619 ORTHO05D009522 1.3e-46 191.0 324 40.7
Zm00001eb017060 Zea mays HOM05D007619 ORTHO05D009522 3.0e-46 189.9 339 40.4
Oeu010149.1 Olea europaea HOM05D007619 ORTHO05D009522 1.1e-45 188.0 282 44.0
Dinv29118 Davidia involucrata HOM05D007619 ORTHO05D009522 1.5e-45 187.6 254 46.1
QL01p050350 Quercus lobata HOM05D000003 ORTHO05D000004 4.0e-43 179.5 222 50.0
Os01g0100600 Oryza sativa ssp. japonica HOM05D007619 ORTHO05D009522 1.3e-41 174.5 330 40.6
Mapoly0093s0084 Marchantia polymorpha HOM05D007619 ORTHO05D009522 8.3e-41 171.8 186 53.8
SalBow6G3661 Salvia bowleyana HOM05D007619 ORTHO05D009522 2.3e-38 163.7 291 39.5
Pp3c8_1020 Physcomitrium patens HOM05D007619 ORTHO05D009522 2.1e-36 157.1 182 51.1
SEGI_00786 Sequoiadendron giganteum HOM05D007619 ORTHO05D009522 1.3e-33 147.9 121 59.5
Sabra18G0055400 Salix brachista HOM05D007619 ORTHO05D009522 2.9e-33 146.7 93 74.2
Oeu040489.1 Olea europaea HOM05D007619 ORTHO05D009522 3.2e-32 143.3 96 69.8
AagrBONN_evm.TU.Sc2ySwM_117.3969 Anthoceros agrestis HOM05D007619 ORTHO05D009522 6.6e-30 135.6 314 36.3
MD12G1258700 Malus domestica HOM05D007619 ORTHO05D009522 1.2e-28 131.3 80 73.8
SHI13735 Sapria himalayana HOM05D007619 ORTHO05D009522 3.6e-28 129.8 299 37.1
MD12G1258600 Malus domestica HOM05D007619 ORTHO05D009522 2.6e-26 123.6 204 45.6
Actinidia38907 Actinidia chinensis HOM05D003215 ORTHO05D003735 1.3e-25 121.3 128 53.9
SMO230G0088 Selaginella moellendorffii HOM05D007619 ORTHO05D009522 9.2e-24 115.2 187 41.2
Cpa.g.sc1371.1 Carica papaya HOM05D007619 ORTHO05D009522 1.2e-23 114.8 193 44.0
Cpa.g.c37388 Carica papaya HOM05D007619 ORTHO05D009522 3.2e-16 90.1 50 78.0
Sabra18G0055300 Salix brachista HOM05D007619 ORTHO05D009522 9.3e-16 88.6 182 41.8
ATR0609G094 Amborella trichopoda HOM05D007619 ORTHO05D009522 8.1e-12 75.5 174 39.7
FvH4_6g00730 Fragaria vesca HOM05D007619 ORTHO05D009522 1.3e-09 68.2 40 80.0
SEGI_37386 Sequoiadendron giganteum HOM05D007619 ORTHO05D009522 6.4e-09 65.9 89 46.1


User provided reference genes

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