Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01019142001 Vitis vinifera HOM05D008595 ORTHO05D009597 2.2e-65 252.3 139 100.0
EL10Ac5g11379 Beta vulgaris HOM05D008595 ORTHO05D010945 7.6e-10 67.8 82 43.9
PGR044G2317 Punica granatum HOM05D001309 ORTHO05D000385 7.6e-10 67.8 84 42.9
EL10Ac1g01792 Beta vulgaris HOM05D008595 ORTHO05D010945 9.9e-10 67.4 82 43.9
EL10Ac5g11348 Beta vulgaris HOM05D008595 ORTHO05D010945 1.7e-09 66.6 82 42.7
EL10Ac1g02242 Beta vulgaris HOM05D008595 ORTHO05D010945 2.2e-09 66.2 82 42.7
EL10Ac3g06761 Beta vulgaris HOM05D008595 ORTHO05D010945 2.9e-09 65.9 82 42.7
EL10Ac3g06763 Beta vulgaris HOM05D008595 ORTHO05D010945 2.9e-09 65.9 82 42.7
EL10Ac5g11789 Beta vulgaris HOM05D008595 ORTHO05D010945 2.9e-09 65.9 82 42.7
EL10Ac8g20153 Beta vulgaris HOM05D008595 ORTHO05D010945 2.9e-09 65.9 82 42.7
EL10Ac9g20878 Beta vulgaris HOM05D008595 ORTHO05D010945 2.9e-09 65.9 82 42.7
EL10Ac2g03126 Beta vulgaris HOM05D008595 ORTHO05D010945 3.8e-09 65.5 82 41.5
EL10Ac6g14473 Beta vulgaris HOM05D008595 ORTHO05D010945 3.8e-09 65.5 82 42.7
EL10Ac5g11175 Beta vulgaris HOM05D008595 ORTHO05D010945 4.9e-09 65.1 82 42.7
EL10Ac6g14559 Beta vulgaris HOM05D008595 ORTHO05D010945 4.9e-09 65.1 82 42.7
EL10Ac7g16685 Beta vulgaris HOM05D008595 ORTHO05D010945 6.4e-09 64.7 82 42.7
EL10Ac5g11817 Beta vulgaris HOM05D008595 ORTHO05D010945 1.1e-08 63.9 82 42.7
EL10As20g24214 Beta vulgaris HOM05D008595 ORTHO05D010945 1.1e-08 63.9 82 42.7
MBI16_g07725_MAGBIO Magnolia biondii HOM05D003534 ORTHO05D000385 1.1e-08 63.9 80 38.8
EL10Ac6g14350 Beta vulgaris HOM05D008595 ORTHO05D010945 2.4e-08 62.8 82 41.5
CSS0000056 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.2e-08 62.0 101 34.7
CSS0027143 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.2e-08 62.0 101 34.7
EL10Ac8g19368 Beta vulgaris HOM05D008595 ORTHO05D010945 5.4e-08 61.6 82 40.2
CSS0023154 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 7.1e-08 61.2 101 34.7
Nn3g21442 Nelumbo nucifera HOM05D001309 ORTHO05D000385 7.1e-08 61.2 86 37.2
CSS0004008 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.3e-08 60.8 80 38.8
CSS0018077 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.3e-08 60.8 80 38.8
CSS0030327 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.3e-08 60.8 80 38.8
EL10Ac8g19872 Beta vulgaris HOM05D008595 ORTHO05D010945 1.2e-07 60.5 82 40.2
EL10Ac4g08588 Beta vulgaris HOM05D008595 ORTHO05D010945 2.1e-07 59.7 82 40.2
EL10Ac5g11498 Beta vulgaris HOM05D008595 ORTHO05D010945 2.1e-07 59.7 82 40.2
CSS0019964 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 2.7e-07 59.3 103 34.0
CSS0000994 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 3.5e-07 58.9 80 37.5
Manes.07G063157 Manihot esculenta HOM05D009290 ORTHO05D009597 3.5e-07 58.9 108 28.7
CSS0014937 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.6e-07 58.5 99 34.3
Manes.18G114301 Manihot esculenta HOM05D009290 ORTHO05D009597 4.6e-07 58.5 108 28.7
EL10Ac5g11465 Beta vulgaris HOM05D008595 ORTHO05D010945 6.0e-07 58.2 82 40.2
CSS0016301 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.0e-07 58.2 80 37.5
Manes.08G084511 Manihot esculenta HOM05D009290 ORTHO05D009597 6.0e-07 58.2 108 28.7
Nn3g20149 Nelumbo nucifera HOM05D001309 ORTHO05D000385 7.9e-07 57.8 81 35.8
EL10Ac9g20868 Beta vulgaris HOM05D008595 ORTHO05D010945 1.0e-06 57.4 82 40.2
Manes.06G115750 Manihot esculenta HOM05D009290 ORTHO05D009597 1.0e-06 57.4 107 28.0
EL10Ac5g10887 Beta vulgaris HOM05D008595 ORTHO05D010945 1.3e-06 57.0 82 40.2
Lj5g0025673 Lotus japonicus HOM05D001309 ORTHO05D000385 1.3e-06 57.0 80 33.8
Manes.08G028050 Manihot esculenta HOM05D009290 ORTHO05D009597 1.3e-06 57.0 107 28.0
Manes.11G040473 Manihot esculenta HOM05D009290 ORTHO05D009597 1.3e-06 57.0 107 28.0
Manes.16G080850 Manihot esculenta HOM05D009290 ORTHO05D009597 1.3e-06 57.0 107 28.0
TAR624G0746 Trochodendron aralioides HOM05D001309 ORTHO05D000385 1.3e-06 57.0 85 36.5
Gorai.002G216700 Gossypium raimondii HOM05D001309 ORTHO05D000385 1.7e-06 56.6 79 36.7
Manes.15G180436 Manihot esculenta HOM05D009290 ORTHO05D009597 1.7e-06 56.6 83 31.3
Nitab4.5_0022706g0010 Nicotiana tabacum HOM05D009290 ORTHO05D009597 1.7e-06 56.6 84 31.0
Peaxi162Scf00032g00919 Petunia axillaris HOM05D001309 ORTHO05D000385 1.7e-06 56.6 81 33.3
COL.COLO4_17726 Corchorus olitorius HOM05D001309 ORTHO05D005970 2.3e-06 56.2 77 39.0
Nn2g14848 Nelumbo nucifera HOM05D001309 ORTHO05D000385 3.0e-06 55.8 78 34.6
Nn7g37626 Nelumbo nucifera HOM05D001309 ORTHO05D000385 3.0e-06 55.8 77 37.7
Gohir.A12G044100 Gossypium hirsutum HOM05D001309 ORTHO05D005970 3.9e-06 55.5 79 36.7
Gohir.D12G043100 Gossypium hirsutum HOM05D001309 ORTHO05D000385 3.9e-06 55.5 79 36.7
Gorai.008G045300 Gossypium raimondii HOM05D001309 ORTHO05D005970 5.1e-06 55.1 79 36.7
MBI15_g36793_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 5.1e-06 55.1 81 33.3
Manes.12G086248 Manihot esculenta HOM05D009290 ORTHO05D009597 5.1e-06 55.1 107 27.1
CSS0030235 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 6.6e-06 54.7 101 32.7
Gohir.A01G183600 Gossypium hirsutum HOM05D001309 ORTHO05D005970 6.6e-06 54.7 79 35.4
MD15G1435000 Malus domestica HOM05D005763 ORTHO05D005970 6.6e-06 54.7 84 38.1
EL10Ac6g14177 Beta vulgaris HOM05D008595 ORTHO05D010945 8.7e-06 54.3 82 37.8
TAR376G0246 Trochodendron aralioides HOM05D001309 ORTHO05D000385 8.7e-06 54.3 82 34.1


User provided reference genes

Program Settings