Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01019132001 Vitis vinifera HOM05D005279 ORTHO05D006757 0.0e+00 1110.1 558 100.0
TAR633G0866 Trochodendron aralioides HOM05D005279 ORTHO05D006757 2.5e-213 745.7 543 68.3
Atru.chr12.2109 Acer truncatum HOM05D005279 ORTHO05D006757 4.4e-202 708.4 546 63.6
Potri.013G087400 Populus trichocarpa HOM05D005279 ORTHO05D006757 9.9e-202 707.2 547 65.6
Nn1g08317 Nelumbo nucifera HOM05D005279 ORTHO05D006757 3.5e-199 698.7 537 63.9
MD12G1258400 Malus domestica HOM05D005279 ORTHO05D006757 1.0e-198 697.2 541 64.9
TWI23G0564 Tripterygium wilfordii HOM05D005279 ORTHO05D006757 3.3e-197 692.2 546 64.8
Rhsim09G0131400 Rhododendron simsii HOM05D005279 ORTHO05D006757 4.3e-197 691.8 555 61.3
Manes.09G184200 Manihot esculenta HOM05D005279 ORTHO05D006757 8.1e-196 687.6 560 62.0
vmacro10395 Vaccinium macrocarpon HOM05D005279 ORTHO05D006757 9.0e-195 684.1 558 62.0
Glyma.09G252300 Glycine max HOM05D005279 ORTHO05D006757 1.7e-193 679.9 555 62.7
Ciclev10011262m.g Citrus clementina HOM05D005279 ORTHO05D006757 8.4e-193 677.6 551 62.4
Glyma.18G240300 Glycine max HOM05D005279 ORTHO05D006757 1.4e-192 676.8 545 62.6
RcHm_v2.0_Chr3g0448231 Rosa chinensis HOM05D005279 ORTHO05D006757 1.4e-192 676.8 543 63.2
Phvul.008G055900 Phaseolus vulgaris HOM05D005279 ORTHO05D006757 6.0e-191 671.4 553 61.5
Duzib177G0028 Durio zibethinus HOM05D005279 ORTHO05D006757 6.7e-190 667.9 545 62.2
FAN09G4620 Fragaria x ananassa HOM05D005279 ORTHO05D006757 2.5e-189 666.0 543 63.0
arahy.Tifrunner.gnm1.ann1.X9YPPN Arachis hypogaea HOM05D005279 ORTHO05D006757 4.3e-189 665.2 559 60.3
MELO3C008759.2 Cucumis melo HOM05D005279 ORTHO05D006757 2.1e-188 662.9 538 61.5
FAN05G0195 Fragaria x ananassa HOM05D005279 ORTHO05D006757 3.7e-188 662.1 542 62.7
Ca_07964_v3 Cicer arietinum L. HOM05D005279 ORTHO05D006757 8.1e-188 661.0 561 60.1
CiPaw.08G116500 Carya illinoinensis HOM05D005279 ORTHO05D006757 1.1e-187 660.6 539 62.9
Lj1g0001090 Lotus japonicus HOM05D005279 ORTHO05D006757 1.1e-187 660.6 560 60.7
FvH4_6g00750 Fragaria vesca HOM05D005279 ORTHO05D006757 2.4e-187 659.4 542 62.2
FAN14G2044 Fragaria x ananassa HOM05D005279 ORTHO05D006757 2.4e-187 659.4 542 62.2
ClCG11G011000 Citrullus lanatus HOM05D005279 ORTHO05D006757 4.0e-187 658.7 530 62.3
VMungo1383G2490 Vigna mungo HOM05D005279 ORTHO05D006757 4.0e-187 658.7 558 60.6
CsaV3_2G009490 Cucumis sativus L. HOM05D005279 ORTHO05D006757 5.3e-187 658.3 540 61.7
Solyc04g051310.4 Solanum lycopersicum HOM05D005279 ORTHO05D006757 1.5e-186 656.8 541 60.8
Sopen04g022730 Solanum pennellii HOM05D005279 ORTHO05D006757 2.6e-186 656.0 541 61.0
TPR.G32005 Trifolium pratense HOM05D005279 ORTHO05D006757 1.7e-185 653.3 561 59.7
Eucgr.H01378 Eucalyptus grandis HOM05D005279 ORTHO05D006757 6.5e-185 651.4 544 60.7
Sed0005684 Sechium edule HOM05D005279 ORTHO05D006757 6.5e-185 651.4 537 60.7
Prupe.6G359100 Prunus persica HOM05D005279 ORTHO05D006757 8.4e-185 651.0 457 71.3
MSTRG.320 Avicennia marina HOM05D005279 ORTHO05D006757 1.1e-184 650.6 546 61.7
Medtr7g079510 Medicago truncatula HOM05D005279 ORTHO05D006757 4.6e-183 645.2 552 59.2
Aqoxy2G03953 Aquilegia oxysepala HOM05D005279 ORTHO05D006757 2.3e-182 642.9 540 59.4
COL.COLO4_19830 Corchorus olitorius HOM05D005279 ORTHO05D006757 2.3e-182 642.9 545 59.4
Cfa006283 Carpinus fangiana HOM05D005279 ORTHO05D006757 2.5e-181 639.4 426 72.5
Duzib128G1767 Durio zibethinus HOM05D005279 ORTHO05D006757 7.4e-181 637.9 546 60.3
Lalb_Chr19g0126771 Lupinus albus HOM05D005279 ORTHO05D006757 4.8e-180 635.2 538 60.2
PSO675G1387 Papaver somniferum HOM05D005279 ORTHO05D006757 2.0e-178 629.8 539 58.3
Cc09_g03410 Coffea canephora HOM05D005279 ORTHO05D006757 2.6e-178 629.4 540 60.2
Peaxi162Scf00994g00010 Petunia axillaris HOM05D005279 ORTHO05D006757 2.6e-178 629.4 540 59.1
DCAR_023849 Daucus carota HOM05D005279 ORTHO05D006757 1.6e-175 620.2 536 57.3
Gohir.D08G244200 Gossypium hirsutum HOM05D005279 ORTHO05D006757 1.6e-175 620.2 543 58.7
Lsat_1_v5_gn_9_48740 Lactuca sativa HOM05D005279 ORTHO05D006757 2.7e-175 619.4 536 59.1
Gohir.A08G223900 Gossypium hirsutum HOM05D005279 ORTHO05D006757 7.9e-175 617.8 544 58.8
Gorai.004G260500 Gossypium raimondii HOM05D005279 ORTHO05D006757 3.9e-174 615.5 543 58.6
PGR031G1864 Punica granatum HOM05D005279 ORTHO05D006757 3.9e-174 615.5 540 58.5
ECA232G1216 Erigeron canadensis HOM05D005279 ORTHO05D006757 6.7e-174 614.8 538 59.9
THA.LOC104802949 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 7.4e-173 611.3 538 57.2
Migut.F01884 Erythranthe guttata HOM05D005279 ORTHO05D006757 2.2e-172 609.8 538 57.6
AUR62000356 Chenopodium quinoa HOM05D005279 ORTHO05D006757 6.3e-172 608.2 539 57.3
Sabra13G0070000 Salix brachista HOM05D005279 ORTHO05D006757 6.9e-171 604.7 558 57.0
Sed0008551 Sechium edule HOM05D005279 ORTHO05D006757 2.0e-170 603.2 504 61.1
AT5G16520 Arabidopsis thaliana HOM05D005279 ORTHO05D006757 4.5e-170 602.1 538 56.5
Dinv29119 Davidia involucrata HOM05D005279 ORTHO05D006757 1.0e-169 600.9 363 78.2
Carub.0006s1472 Capsella rubella HOM05D005279 ORTHO05D006757 5.0e-169 598.6 559 55.5
Aa31LG11G13130 Aethionema arabicum HOM05D005279 ORTHO05D006757 6.5e-169 598.2 540 54.8
Thhalv10012976m.g Eutrema salsugineum HOM05D005279 ORTHO05D006757 3.2e-168 595.9 543 56.0
HanXRQChr05g0156961 Helianthus annuus HOM05D005279 ORTHO05D006757 5.5e-168 595.1 558 56.1
AL6G27470 Arabidopsis lyrata HOM05D005279 ORTHO05D006757 7.2e-168 594.7 542 56.3
Lsat_1_v5_gn_8_2100 Lactuca sativa HOM05D005279 ORTHO05D006757 9.4e-168 594.3 537 58.8
ECA233G5391 Erigeron canadensis HOM05D005279 ORTHO05D006757 1.8e-166 590.1 559 55.8
THA.LOC104827466 Tarenaya hassleriana HOM05D005279 ORTHO05D006757 2.0e-165 586.6 544 54.6
CARHR196710 Cardamine hirsuta HOM05D005279 ORTHO05D006757 1.3e-164 583.9 540 55.9
EL10Ac4g09419 Beta vulgaris HOM05D005279 ORTHO05D006757 2.2e-164 583.2 538 55.0
BolC3t13400H Brassica oleracea HOM05D005279 ORTHO05D006757 2.2e-164 583.2 548 55.5
C03p09050 Brassica napus HOM05D005279 ORTHO05D006757 1.4e-163 580.5 548 55.3
BcaB01g04978 Brassica carinata HOM05D005279 ORTHO05D006757 3.1e-163 579.3 548 54.7
Sp6g27630 Schrenkiella parvula HOM05D005279 ORTHO05D006757 6.9e-163 578.2 543 55.4
A03p07830 Brassica napus HOM05D005279 ORTHO05D006757 5.9e-162 575.1 544 55.5
HanXRQChr11g0323931 Helianthus annuus HOM05D005279 ORTHO05D006757 5.9e-162 575.1 538 54.8
Nitab4.5_0000276g0070 Nicotiana tabacum HOM05D005279 ORTHO05D006757 7.7e-162 574.7 515 57.9
Dinv09865 Davidia involucrata HOM05D005279 ORTHO05D006757 4.2e-160 568.9 453 64.9
Nitab4.5_0000456g0100 Nicotiana tabacum HOM05D005279 ORTHO05D006757 1.6e-159 567.0 507 58.6
Hund29803 Selenicereus undatus HOM05D005279 ORTHO05D006757 6.1e-159 565.1 427 64.2
Hund29802 Selenicereus undatus HOM05D005279 ORTHO05D006757 1.8e-158 563.5 427 63.9
Ah.04g158770 Amaranthus hybridus HOM05D005279 ORTHO05D006757 1.7e-153 547.0 537 53.1
SGA_v2.0_scaffold122G33172 Striga asiatica HOM05D005279 ORTHO05D006757 3.2e-152 542.7 438 61.6
SalBow6G4947 Salvia bowleyana HOM05D005279 ORTHO05D006757 5.5e-152 542.0 463 60.3
FAN02G0830 Fragaria x ananassa HOM05D005279 ORTHO05D006757 7.2e-152 541.6 562 52.7
Hund07324 Selenicereus undatus HOM05D005279 ORTHO05D006757 3.0e-150 536.2 607 49.3
ATR0609G131 Amborella trichopoda HOM05D005279 ORTHO05D006757 2.2e-148 530.0 450 57.1
arahy.Tifrunner.gnm1.ann1.GMHU8S Arachis hypogaea HOM05D005279 ORTHO05D006757 2.8e-148 529.6 489 56.9
Sc09g0001590 Simmondsia chinensis HOM05D005279 ORTHO05D006757 2.8e-148 529.6 364 67.9
unitig_26.g8932 Utricularia gibba HOM05D005279 ORTHO05D006757 7.7e-146 521.5 538 53.3
Psat3g104240 Pisum sativum HOM05D005279 ORTHO05D006757 1.3e-145 520.8 487 55.6
MBI07_g25290_MAGBIO Magnolia biondii HOM05D005279 ORTHO05D006757 7.5e-141 505.0 474 54.9
Lj1A580T7 Lonicera japonica HOM05D005279 ORTHO05D006757 2.4e-139 500.0 461 55.7
CDE09G0872 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 4.5e-138 495.7 547 48.1
Haze_04526 Corylus avellana HOM05D005279 ORTHO05D006757 1.7e-137 493.8 308 76.3
CANSAT54G1354 Cannabis sativa HOM05D005279 ORTHO05D006757 4.2e-136 489.2 324 72.2
Thecc.05G206100 Theobroma cacao HOM05D005279 ORTHO05D006757 1.3e-132 477.6 454 56.2
AUR62006699 Chenopodium quinoa HOM05D005279 ORTHO05D006757 2.0e-130 470.3 468 53.4
Oeu040486.2 Olea europaea HOM05D005279 ORTHO05D006757 4.5e-130 469.2 309 71.8
SEGI_07718 Sequoiadendron giganteum HOM05D005279 ORTHO05D006757 1.0e-129 468.0 448 51.8
Oeu010147.1 Olea europaea HOM05D005279 ORTHO05D006757 2.3e-129 466.8 309 71.2
CSS0033137 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 1.9e-128 463.8 314 68.8
CSS0033709 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 1.9e-128 463.8 314 68.8
CAN.G29.21 Capsicum annuum HOM05D005279 ORTHO05D006757 2.9e-124 449.9 340 62.9
Cpa.g.c32193 Carica papaya HOM05D005279 ORTHO05D006757 4.9e-124 449.1 308 70.1
BraA03t10110Z Brassica rapa HOM05D005279 ORTHO05D006757 1.4e-123 447.6 471 52.2
Os01g0100500 Oryza sativa ssp. japonica HOM05D005279 ORTHO05D006757 2.7e-122 443.4 434 52.1
QL01p050313 Quercus lobata HOM05D005279 ORTHO05D006757 9.2e-115 418.3 278 74.5
SHI13733 Sapria himalayana HOM05D005279 ORTHO05D006757 4.6e-114 416.0 431 52.4
AUR62012181 Chenopodium quinoa HOM05D005279 ORTHO05D006757 2.3e-113 413.7 379 53.3
Zm00001eb017080 Zea mays HOM05D005279 ORTHO05D006757 3.0e-113 413.3 378 52.6
Zm00001eb334030 Zea mays HOM05D005279 ORTHO05D006757 1.8e-110 404.1 441 47.2
PGSC0003DMG402016935 Solanum tuberosum HOM05D005279 ORTHO05D006757 1.5e-104 384.4 257 70.0
Lju5221C0T3 Lonicera japonica HOM05D005279 ORTHO05D006757 2.5e-104 383.6 322 58.4
Hund16011 Selenicereus undatus HOM05D005279 ORTHO05D006757 7.6e-101 372.1 430 44.0
Actinidia38912 Actinidia chinensis HOM05D005279 ORTHO05D006757 2.7e-98 363.6 352 57.1
EL10Ac2g04762 Beta vulgaris HOM05D005279 ORTHO05D006757 4.4e-93 346.3 303 55.1
CDE02G4206 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 4.0e-86 323.2 276 54.3
AagrBONN_evm.TU.Sc2ySwM_228.5255 Anthoceros agrestis HOM05D005279 ORTHO05D006757 3.4e-85 320.1 466 38.8
HPP92_021393 Vanilla planifolia HOM05D005279 ORTHO05D006757 3.3e-80 303.5 444 40.1
HPP92_025240 Vanilla planifolia HOM05D005279 ORTHO05D006757 2.4e-75 287.3 307 48.9
CDE12G0554 Ceratophyllum demersum HOM05D005279 ORTHO05D006757 1.3e-73 281.6 203 63.5
AUR62022817 Chenopodium quinoa HOM05D005279 ORTHO05D006757 5.1e-65 253.1 446 38.6
MD04G1241700 Malus domestica HOM05D005279 ORTHO05D006757 5.3e-62 243.0 230 57.0
RcHm_v2.0_Chr2g0115301 Rosa chinensis HOM05D005279 ORTHO05D006757 7.9e-58 229.2 160 66.9
PGSC0003DMG401016935 Solanum tuberosum HOM05D005279 ORTHO05D006757 1.1e-48 198.7 253 46.2
Ah.16g102880 Amaranthus hybridus HOM05D005279 ORTHO05D006757 1.8e-46 191.4 195 44.1
Haze_04527 Corylus avellana HOM05D005279 ORTHO05D006757 1.2e-45 188.7 214 50.5
RcHm_v2.0_Chr7g0239281 Rosa chinensis HOM05D005279 ORTHO05D006757 1.5e-45 188.3 133 64.7
QL01p050319 Quercus lobata HOM05D005279 ORTHO05D006757 3.3e-40 170.6 147 60.5
CSS0049023 Camellia sinensis var. sinensis HOM05D005279 ORTHO05D006757 1.6e-37 161.8 210 48.1
Lju5221A0T19 Lonicera japonica HOM05D005279 ORTHO05D006757 3.5e-37 160.6 153 56.9
Oeu010148.1 Olea europaea HOM05D005279 ORTHO05D006757 5.4e-22 110.2 139 46.0
SEGI_28852 Sequoiadendron giganteum HOM05D005279 ORTHO05D006757 2.4e-14 84.7 250 29.6
Nitab4.5_0000276g0080 Nicotiana tabacum HOM05D005279 ORTHO05D006757 3.1e-14 84.3 44 79.5
Nitab4.5_0000456g0110 Nicotiana tabacum HOM05D005279 ORTHO05D006757 5.9e-13 80.1 44 75.0
Actinidia34772 Actinidia chinensis HOM05D005279 ORTHO05D006757 1.0e-12 79.3 44 77.3
HPP92_025241 Vanilla planifolia HOM05D005279 ORTHO05D006757 1.0e-12 79.3 140 37.9
Hund21883 Selenicereus undatus HOM05D005279 ORTHO05D037448 1.8e-06 58.5 74 47.3
Hund30008 Selenicereus undatus HOM05D005279 ORTHO05D037448 7.0e-06 56.6 55 54.5


User provided reference genes

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