Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01018918001 Vitis vinifera HOM05D000149 ORTHO05D000076 3.8e-35 151.0 77 100.0
GSVIVG01018916001 Vitis vinifera HOM05D000149 ORTHO05D000076 1.0e-16 89.7 52 84.6
GSVIVG01018913001 Vitis vinifera HOM05D000149 ORTHO05D000076 8.5e-11 70.1 51 66.7
ECA246G0294 Erigeron canadensis HOM05D000635 ORTHO05D000488 1.0e-08 63.2 52 53.8
ECA236G0614 Erigeron canadensis HOM05D000149 ORTHO05D000076 2.3e-08 62.0 52 51.9
Lsat_1_v5_gn_5_53841 Lactuca sativa HOM05D000149 ORTHO05D001532 3.0e-08 61.6 51 54.9
Gorai.008G066100 Gossypium raimondii HOM05D000149 ORTHO05D000076 3.9e-08 61.2 51 58.8
Gohir.A12G063100 Gossypium hirsutum HOM05D000149 ORTHO05D000076 5.1e-08 60.8 51 58.8
Gohir.D12G062900 Gossypium hirsutum HOM05D000149 ORTHO05D000076 6.7e-08 60.5 51 58.8
Hma1.2p1_0684F.1_g203030 Hydrangea macrophylla HOM05D000149 ORTHO05D000076 8.8e-08 60.1 51 56.9
HanXRQChr04g0123711 Helianthus annuus HOM05D000149 ORTHO05D000076 1.1e-07 59.7 52 53.8
Potri.019G022000 Populus trichocarpa HOM05D000149 ORTHO05D000076 1.5e-07 59.3 52 53.8
Duzib114G0161 Durio zibethinus HOM05D000149 ORTHO05D000076 2.0e-07 58.9 51 52.9
Duzib147G1346 Durio zibethinus HOM05D000149 ORTHO05D000076 2.0e-07 58.9 51 56.9
MBI05_g19988_MAGBIO Magnolia biondii HOM05D000149 ORTHO05D000076 2.0e-07 58.9 51 52.9
Haze_03858 Corylus avellana HOM05D000149 ORTHO05D000076 2.6e-07 58.5 51 54.9
DCAR_029541 Daucus carota HOM05D000149 ORTHO05D000076 2.6e-07 58.5 51 52.9
HanXRQChr11g0333571 Helianthus annuus HOM05D000149 ORTHO05D000076 2.6e-07 58.5 52 51.9
QL04p049272 Quercus lobata HOM05D000149 ORTHO05D000076 2.6e-07 58.5 51 54.9
Cfa006893 Carpinus fangiana HOM05D000149 ORTHO05D000076 3.3e-07 58.2 51 52.9
MBI16_g26157_MAGBIO Magnolia biondii HOM05D000149 ORTHO05D000076 3.3e-07 58.2 51 51.0
Potri.019G022200 Populus trichocarpa HOM05D000149 ORTHO05D000076 3.3e-07 58.2 52 51.9
QL04p049338 Quercus lobata HOM05D000149 ORTHO05D000076 3.3e-07 58.2 51 54.9
QL11p012484 Quercus lobata HOM05D000149 ORTHO05D000076 3.3e-07 58.2 60 51.7
GSVIVG01018903001 Vitis vinifera HOM05D000149 ORTHO05D000076 3.3e-07 58.2 51 54.9
Atru.chr3.641 Acer truncatum HOM05D000149 ORTHO05D000076 4.4e-07 57.8 51 52.9
Atru.chr3.645 Acer truncatum HOM05D000149 ORTHO05D000076 4.4e-07 57.8 51 52.9
Atru.chr3.687 Acer truncatum HOM05D000149 ORTHO05D000076 4.4e-07 57.8 51 52.9
Atru.chr3.691 Acer truncatum HOM05D000149 ORTHO05D000076 4.4e-07 57.8 51 52.9
HanXRQChr02g0049991 Helianthus annuus HOM05D000149 ORTHO05D000076 4.4e-07 57.8 52 51.9
Lsat_1_v5_gn_3_139781 Lactuca sativa HOM05D000149 ORTHO05D000076 4.4e-07 57.8 52 46.2
TPR.G21522 Trifolium pratense HOM05D000149 ORTHO05D000076 4.4e-07 57.8 61 45.9
GSVIVG01018900001 Vitis vinifera HOM05D000149 ORTHO05D000076 4.4e-07 57.8 60 51.7
COL.COLO4_22031 Corchorus olitorius HOM05D000149 ORTHO05D000076 5.7e-07 57.4 51 54.9
HanXRQChr06g0168711 Helianthus annuus HOM05D000149 ORTHO05D000076 5.7e-07 57.4 76 40.8
QL06p035461 Quercus lobata HOM05D000149 ORTHO05D000076 5.7e-07 57.4 60 51.7
Thecc.01G030200 Theobroma cacao HOM05D000149 ORTHO05D000076 5.7e-07 57.4 51 54.9
TWI09G0228 Tripterygium wilfordii HOM05D000149 ORTHO05D000076 5.7e-07 57.4 51 52.9
TAR376G0886 Trochodendron aralioides HOM05D000149 ORTHO05D000076 5.7e-07 57.4 51 51.0
GSVIVG01018904001 Vitis vinifera HOM05D000149 ORTHO05D000076 5.7e-07 57.4 51 52.9
HanXRQChr09g0261421 Helianthus annuus HOM05D000149 ORTHO05D000076 7.4e-07 57.0 51 52.9
Medtr8g076900 Medicago truncatula HOM05D000149 ORTHO05D000076 7.4e-07 57.0 61 45.9
TAR376G0623 Trochodendron aralioides HOM05D000149 ORTHO05D000076 7.4e-07 57.0 51 51.0
GSVIVG01018911001 Vitis vinifera HOM05D000149 ORTHO05D000076 7.4e-07 57.0 76 43.4
MELO3C007852.2 Cucumis melo HOM05D000149 ORTHO05D000076 9.7e-07 56.6 73 38.4
CsaV3_6G046520 Cucumis sativus L. HOM05D000149 ORTHO05D000076 9.7e-07 56.6 73 38.4
ECA236G3725 Erigeron canadensis HOM05D000149 ORTHO05D000076 9.7e-07 56.6 51 52.9
Gohir.A12G063000 Gossypium hirsutum HOM05D000149 ORTHO05D000076 9.7e-07 56.6 51 52.9
HanXRQChr06g0168701 Helianthus annuus HOM05D000149 ORTHO05D000076 9.7e-07 56.6 51 49.0
HanXRQChr09g0261411 Helianthus annuus HOM05D000149 ORTHO05D000076 9.7e-07 56.6 51 52.9
HanXRQChr15g0476181 Helianthus annuus HOM05D000149 ORTHO05D000076 9.7e-07 56.6 52 50.0
QL11p012695 Quercus lobata HOM05D000149 ORTHO05D000076 9.7e-07 56.6 51 52.9
Thecc.09G244400 Theobroma cacao HOM05D000149 ORTHO05D000076 9.7e-07 56.6 51 51.0
Gorai.008G065900 Gossypium raimondii HOM05D000149 ORTHO05D000076 1.3e-06 56.2 51 52.9
HanXRQChr09g0261171 Helianthus annuus HOM05D000149 ORTHO05D000076 1.3e-06 56.2 51 52.9
HanXRQChr09g0261181 Helianthus annuus HOM05D000149 ORTHO05D000076 1.3e-06 56.2 51 52.9
PGR102G1138 Punica granatum HOM05D000149 ORTHO05D000076 1.3e-06 56.2 60 50.0
PGR102G1819 Punica granatum HOM05D000149 ORTHO05D000076 1.3e-06 56.2 51 51.0
Dinv43546 Davidia involucrata HOM05D000149 ORTHO05D000076 1.7e-06 55.8 51 58.8
Duzib264G1078 Durio zibethinus HOM05D000149 ORTHO05D000076 1.7e-06 55.8 51 51.0
PSO675G4800 Papaver somniferum HOM05D000149 ORTHO05D000076 1.7e-06 55.8 52 48.1
GSVIVG01018908001 Vitis vinifera HOM05D000149 ORTHO05D000076 1.7e-06 55.8 51 51.0
GSVIVG01018910001 Vitis vinifera HOM05D000149 ORTHO05D000076 1.7e-06 55.8 51 51.0
COL.COLO4_05905 Corchorus olitorius HOM05D000149 ORTHO05D000076 2.2e-06 55.5 51 47.1
Dinv05632 Davidia involucrata HOM05D000149 ORTHO05D000076 2.2e-06 55.5 60 46.7
Dinv43990 Davidia involucrata HOM05D000149 ORTHO05D000076 2.2e-06 55.5 51 54.9
Eucgr.H03340 Eucalyptus grandis HOM05D000149 ORTHO05D000076 2.2e-06 55.5 51 51.0
Gohir.D13G217900 Gossypium hirsutum HOM05D000149 ORTHO05D000076 2.2e-06 55.5 76 36.8
HanXRQChr09g0261441 Helianthus annuus HOM05D000149 ORTHO05D000076 2.2e-06 55.5 51 51.0
HanXRQChr15g0476171 Helianthus annuus HOM05D000149 ORTHO05D000076 2.2e-06 55.5 52 50.0
Sed0006887 Sechium edule HOM05D000149 ORTHO05D000076 2.2e-06 55.5 73 37.0
Sed0027744 Sechium edule HOM05D000149 ORTHO05D000076 2.2e-06 55.5 73 37.0
Thecc.01G030400 Theobroma cacao HOM05D000149 ORTHO05D000076 2.2e-06 55.5 51 52.9
TAR376G0329 Trochodendron aralioides HOM05D000149 ORTHO05D000076 2.2e-06 55.5 51 49.0
Aqoxy1G03149 Aquilegia oxysepala HOM05D000149 ORTHO05D000076 2.8e-06 55.1 51 54.9
Eucgr.H03336 Eucalyptus grandis HOM05D000149 ORTHO05D000076 2.8e-06 55.1 51 51.0
Eucgr.H03338 Eucalyptus grandis HOM05D000149 ORTHO05D000076 2.8e-06 55.1 51 51.0
HanXRQChr11g0325521 Helianthus annuus HOM05D000149 ORTHO05D000076 2.8e-06 55.1 51 49.0
Sc19g0007610 Simmondsia chinensis HOM05D000149 ORTHO05D000076 2.8e-06 55.1 51 49.0
Gorai.013G248600 Gossypium raimondii HOM05D000149 ORTHO05D000076 3.7e-06 54.7 76 36.8
HanXRQChr08g0228021 Helianthus annuus HOM05D000149 ORTHO05D000076 3.7e-06 54.7 52 48.1
Manes.02G096900 Manihot esculenta HOM05D000149 ORTHO05D000076 3.7e-06 54.7 51 51.0
Sc19g0007570 Simmondsia chinensis HOM05D000149 ORTHO05D000076 3.7e-06 54.7 51 49.0
Sc19g0007670 Simmondsia chinensis HOM05D000149 ORTHO05D000076 3.7e-06 54.7 51 49.0
CSS0035688 Camellia sinensis var. sinensis HOM05D000149 ORTHO05D000076 4.8e-06 54.3 51 49.0
CiPaw.07G048800 Carya illinoinensis HOM05D000149 ORTHO05D000076 4.8e-06 54.3 51 51.0
Gohir.A13G214201 Gossypium hirsutum HOM05D000149 ORTHO05D000076 4.8e-06 54.3 52 42.3
Lsat_1_v5_gn_7_55041 Lactuca sativa HOM05D000149 ORTHO05D000076 4.8e-06 54.3 51 49.0
MBI02_g31860_MAGBIO Magnolia biondii HOM05D000149 ORTHO05D000076 4.8e-06 54.3 51 47.1
Nn1g02590 Nelumbo nucifera HOM05D000149 ORTHO05D000076 4.8e-06 54.3 51 47.1
QL05p034831 Quercus lobata HOM05D000149 ORTHO05D000076 4.8e-06 54.3 51 52.9
Sed0023308 Sechium edule HOM05D000149 ORTHO05D000076 4.8e-06 54.3 73 37.0
GSVIVG01018906001 Vitis vinifera HOM05D000149 ORTHO05D000076 4.8e-06 54.3 51 49.0
Ca_22335_v3 Cicer arietinum L. HOM05D004674 ORTHO05D007261 6.3e-06 53.9 60 46.7
Potri.019G022402 Populus trichocarpa HOM05D000149 ORTHO05D000076 6.3e-06 53.9 51 51.0
GSVIVG01018899001 Vitis vinifera HOM05D000149 ORTHO05D000076 6.3e-06 53.9 51 49.0
CiPaw.07G049100 Carya illinoinensis HOM05D000149 ORTHO05D000076 8.2e-06 53.5 51 45.1
HanXRQChr10g0309831 Helianthus annuus HOM05D000149 ORTHO05D000076 8.2e-06 53.5 52 44.2
Hma1.2p1_0932F.1_g238220 Hydrangea macrophylla HOM05D000149 ORTHO05D000076 8.2e-06 53.5 51 47.1
Potri.007G021300 Populus trichocarpa HOM05D000149 ORTHO05D000076 8.2e-06 53.5 51 49.0


User provided reference genes

Program Settings