Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 7.7e-92 340.5 176 100.0
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 9.8e-55 217.2 194 64.4
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 1.9e-50 203.0 185 63.2
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 1.2e-49 200.3 184 59.8
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 1.6e-49 199.9 199 59.3
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 3.6e-49 198.7 180 62.2
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 4.7e-49 198.4 180 62.2
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 4.0e-48 195.3 173 64.2
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 6.8e-48 194.5 185 61.6
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 2.0e-47 193.0 165 64.2
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 1.4e-45 186.8 185 60.0
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 1.9e-45 186.4 202 55.9
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 2.4e-45 186.0 177 57.6
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 3.2e-45 185.7 183 60.1
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 3.2e-45 185.7 154 66.9
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 4.1e-45 185.3 182 60.4
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 2.7e-44 182.6 182 59.9
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 6.0e-44 181.4 156 60.9
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 7.8e-44 181.0 154 62.3
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 1.0e-43 180.6 186 57.0
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 1.3e-43 180.3 153 61.4
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 2.3e-43 179.5 189 56.6
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 2.3e-43 179.5 170 60.0
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 2.3e-43 179.5 154 61.7
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 3.9e-43 178.7 185 56.8
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 5.0e-43 178.3 153 59.5
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 6.6e-43 177.9 175 58.9
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 8.6e-43 177.6 106 82.1
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.1e-42 177.2 153 58.8
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.1e-42 177.2 153 58.8
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 1.5e-42 176.8 106 82.1
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 1.5e-42 176.8 106 82.1
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 1.5e-42 176.8 106 80.2
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 3.3e-42 175.6 187 55.6
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 9.5e-42 174.1 153 58.2
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.6e-41 173.3 153 58.8
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 2.8e-41 172.6 160 60.6
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 4.7e-41 171.8 179 57.0
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 6.2e-41 171.4 109 77.1
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 8.1e-41 171.0 174 56.3
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 8.1e-41 171.0 174 56.3
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 8.1e-41 171.0 174 56.3
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 8.1e-41 171.0 169 59.2
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 1.1e-40 170.6 187 54.5
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 1.1e-40 170.6 193 54.4
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 1.8e-40 169.9 196 53.6
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 4.0e-40 168.7 178 57.9
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 1.2e-39 167.2 188 56.4
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 1.5e-39 166.8 195 51.3
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 1.5e-39 166.8 170 55.9
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 2.6e-39 166.0 167 57.5
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 5.8e-39 164.9 170 54.7
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 7.5e-39 164.5 171 56.1
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 7.5e-39 164.5 108 76.9
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 7.5e-39 164.5 169 56.2
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 1.3e-38 163.7 166 59.0
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 1.3e-38 163.7 178 56.2
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 2.2e-38 162.9 106 77.4
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 3.7e-38 162.2 157 56.7
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 4.9e-38 161.8 113 70.8
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 8.3e-38 161.0 185 51.4
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 8.3e-38 161.0 174 53.4
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 8.3e-38 161.0 107 74.8
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 1.1e-37 160.6 150 62.0
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 1.9e-37 159.8 176 54.0
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 3.2e-37 159.1 158 55.7
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 9.2e-37 157.5 108 75.9
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 2.1e-36 156.4 168 53.0
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 1.0e-35 154.1 146 60.3
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 6.6e-35 151.4 177 50.8
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 6.6e-35 151.4 158 53.2
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 6.6e-35 151.4 106 67.9
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 8.6e-35 151.0 147 54.4
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 1.1e-34 150.6 143 60.1
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 1.5e-34 150.2 173 50.3
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 4.3e-34 148.7 106 65.1
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 7.3e-34 147.9 167 50.9
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 1.6e-33 146.7 137 59.9
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 1.8e-32 143.3 189 48.1
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 1.8e-32 143.3 155 51.6
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 3.1e-32 142.5 113 61.9
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 6.8e-32 141.4 138 58.0
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 8.9e-32 141.0 164 47.6
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 1.5e-31 140.2 113 60.2
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 6.4e-30 134.8 85 75.3
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 1.7e-27 126.7 184 46.2
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 3.0e-27 125.9 104 59.6
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 3.9e-27 125.6 141 52.5
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 9.6e-26 120.9 175 44.6
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 1.2e-25 120.6 131 55.0
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 3.1e-24 115.9 181 45.9
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 1.3e-22 110.5 116 55.2
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 3.8e-22 109.0 114 55.3
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 4.2e-21 105.5 143 48.3
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 5.1e-19 98.6 144 44.4
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 6.6e-19 98.2 118 50.0
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 6.6e-19 98.2 118 50.0
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 3.3e-18 95.9 130 45.4
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 2.4e-16 89.7 53 77.4
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 1.7e-14 83.6 122 41.0
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 4.9e-14 82.0 135 42.2
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 3.2e-13 79.3 150 40.0
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 4.2e-13 79.0 177 35.0
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 1.2e-12 77.4 145 36.6
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 6.0e-12 75.1 98 50.0
Ah.07g208070 Amaranthus hybridus HOM05D000130 ORTHO05D009058 1.5e-10 70.5 142 42.3
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 9.6e-10 67.8 60 58.3
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 7.6e-07 58.2 140 32.1


User provided reference genes

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