Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01018447001 Vitis vinifera HOM05D003765 ORTHO05D004561 0.0e+00 1239.2 651 100.0
Manes.06G141500 Manihot esculenta HOM05D003765 ORTHO05D004561 1.0e-125 454.9 744 45.6
Thecc.03G167000 Theobroma cacao HOM05D003765 ORTHO05D004561 1.0e-125 454.9 756 44.8
CiPaw.03G100300 Carya illinoinensis HOM05D003765 ORTHO05D004561 2.5e-124 450.3 731 43.9
Gorai.008G281700 Gossypium raimondii HOM05D003765 ORTHO05D004561 4.2e-111 406.4 688 44.6
Haze_13790 Corylus avellana HOM05D003765 ORTHO05D004561 1.2e-110 404.8 673 46.7
Cpa.g.sc4.199 Carica papaya HOM05D003765 ORTHO05D004561 1.1e-108 398.3 772 43.9
Gohir.A12G262100 Gossypium hirsutum HOM05D003765 ORTHO05D004561 1.5e-108 397.9 690 43.6
Duzib205G1056 Durio zibethinus HOM05D003765 ORTHO05D004561 2.6e-108 397.1 626 46.5
Actinidia13542 Actinidia chinensis HOM05D003765 ORTHO05D004561 2.2e-107 394.0 691 42.3
Duzib084G1451 Durio zibethinus HOM05D003765 ORTHO05D004561 3.1e-106 390.2 732 41.1
Potri.015G135200 Populus trichocarpa HOM05D003765 ORTHO05D004561 2.1e-102 377.5 717 41.4
Ciclev10004387m.g Citrus clementina HOM05D003765 ORTHO05D004561 4.4e-100 369.8 768 40.9
Potri.012G132900 Populus trichocarpa HOM05D003765 ORTHO05D004561 9.7e-100 368.6 758 40.6
Sabra15G0147100 Salix brachista HOM05D003765 ORTHO05D004561 1.2e-97 361.7 716 39.8
Manes.14G030900 Manihot esculenta HOM05D003765 ORTHO05D004561 2.0e-97 360.9 756 39.6
Peaxi162Scf00192g00516 Petunia axillaris HOM05D003765 ORTHO05D004561 8.5e-96 355.5 760 40.0
Gohir.D12G262800 Gossypium hirsutum HOM05D003765 ORTHO05D004561 3.7e-91 340.1 587 44.5
TAR629G2057 Trochodendron aralioides HOM05D003765 ORTHO05D004561 8.3e-91 339.0 693 41.7
Nn1g01288 Nelumbo nucifera HOM05D003765 ORTHO05D004561 1.1e-90 338.6 795 37.0
FvH4_7g28730 Fragaria vesca HOM05D003765 ORTHO05D004561 1.2e-89 335.1 712 42.4
Cc02_g03580 Coffea canephora HOM05D003765 ORTHO05D004561 5.9e-89 332.8 771 39.8
FAN06G4109 Fragaria x ananassa HOM05D003765 ORTHO05D004561 7.7e-89 332.4 712 42.1
FAN10G2022 Fragaria x ananassa HOM05D003765 ORTHO05D004561 7.7e-89 332.4 674 42.3
Lj1A988T34 Lonicera japonica HOM05D003765 ORTHO05D004561 1.3e-88 331.6 743 40.5
FAN06G1616 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.7e-88 331.3 712 42.0
FAN03G1055 Fragaria x ananassa HOM05D003765 ORTHO05D004561 2.3e-88 330.9 711 41.6
FAN03G1770 Fragaria x ananassa HOM05D003765 ORTHO05D004561 1.5e-87 328.2 711 41.6
RcHm_v2.0_Chr1g0376241 Rosa chinensis HOM05D003765 ORTHO05D004561 9.5e-87 325.5 712 40.7
Sopen03g002830 Solanum pennellii HOM05D003765 ORTHO05D004561 2.3e-85 320.9 742 39.4
Sabra12G0100000 Salix brachista HOM05D003765 ORTHO05D004561 6.8e-85 319.3 718 38.0
Nn6g34319 Nelumbo nucifera HOM05D003765 ORTHO05D004561 8.9e-85 318.9 805 36.3
PGSC0003DMG400024251 Solanum tuberosum HOM05D003765 ORTHO05D004561 3.4e-84 317.0 753 38.5
Atru.chr1.559 Acer truncatum HOM05D003765 ORTHO05D004561 5.7e-84 316.2 787 37.9
Gorai.006G196800 Gossypium raimondii HOM05D003765 ORTHO05D004561 1.7e-83 314.7 684 39.0
Prupe.2G287400 Prunus persica HOM05D003765 ORTHO05D004561 8.3e-83 312.4 754 38.2
Solyc03g006840.4 Solanum lycopersicum HOM05D003765 ORTHO05D004561 8.3e-83 312.4 701 39.4
Gohir.D09G174700 Gossypium hirsutum HOM05D003765 ORTHO05D004561 1.8e-82 311.2 684 39.0
Dinv35140 Davidia involucrata HOM05D003765 ORTHO05D004561 9.2e-82 308.9 511 47.9
Glyma.09G148700 Glycine max HOM05D003765 ORTHO05D004561 2.0e-81 307.8 756 38.4
Gohir.A09G179400 Gossypium hirsutum HOM05D003765 ORTHO05D004561 3.5e-81 307.0 689 38.5
Lj2g0000316 Lotus japonicus HOM05D003765 ORTHO05D004561 5.9e-81 306.2 738 39.2
Nitab4.5_0000599g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 1.3e-80 305.1 682 39.7
Peaxi162Scf00557g00216 Petunia axillaris HOM05D003765 ORTHO05D004561 1.3e-80 305.1 734 38.0
MD01G1193200 Malus domestica HOM05D003765 ORTHO05D004561 1.7e-80 304.7 771 36.7
MD00G1004300 Malus domestica HOM05D003765 ORTHO05D004561 3.3e-79 300.4 761 37.1
FAN01G1737 Fragaria x ananassa HOM05D003765 ORTHO05D004561 7.3e-79 299.3 752 38.4
Phvul.004G123200 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 2.8e-78 297.4 739 38.8
Glyma.16G200400 Glycine max HOM05D003765 ORTHO05D004561 1.4e-77 295.0 764 37.8
Oeu030141.1 Olea europaea HOM05D003765 ORTHO05D004561 1.8e-77 294.7 627 40.5
Lalb_Chr03g0034171 Lupinus albus HOM05D003765 ORTHO05D004561 1.2e-76 292.0 733 37.0
Nitab4.5_0004911g0030 Nicotiana tabacum HOM05D003765 ORTHO05D004561 2.6e-76 290.8 696 39.8
Dinv28506 Davidia involucrata HOM05D003765 ORTHO05D004561 4.9e-75 286.6 484 46.7
Oeu030257.1 Olea europaea HOM05D003765 ORTHO05D004561 1.1e-74 285.4 694 37.3
Nitab4.5_0000205g0170 Nicotiana tabacum HOM05D003765 ORTHO05D004561 1.4e-74 285.0 745 36.6
Eucgr.A02847 Eucalyptus grandis HOM05D003765 ORTHO05D004561 2.4e-74 284.3 698 38.3
VMungo0720G0810 Vigna mungo HOM05D003765 ORTHO05D004561 3.3e-71 273.9 719 37.7
MSTRG.8430 Avicennia marina HOM05D003765 ORTHO05D004561 4.7e-70 270.0 641 37.3
THA.LOC104824843 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 4.7e-70 270.0 670 36.6
Phvul.007G065400 Phaseolus vulgaris HOM05D003765 ORTHO05D004561 1.1e-69 268.9 713 37.4
Glyma.10G240600 Glycine max HOM05D003765 ORTHO05D004561 2.3e-69 267.7 749 35.9
THA.LOC104798744 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 9.8e-68 262.3 648 37.2
Rhsim03G0174800 Rhododendron simsii HOM05D003765 ORTHO05D004561 2.9e-67 260.8 596 39.3
Glyma.20G154100 Glycine max HOM05D003765 ORTHO05D004561 1.1e-66 258.8 740 35.4
THA.LOC104811493 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 1.1e-66 258.8 640 38.4
vmacro06738 Vaccinium macrocarpon HOM05D003765 ORTHO05D004561 3.2e-66 257.3 720 36.4
CANSAT21G2021 Cannabis sativa HOM05D003765 ORTHO05D004561 7.0e-66 256.1 819 34.3
SalBow2G1841 Salvia bowleyana HOM05D003765 ORTHO05D004561 5.1e-64 250.0 631 37.1
Lsat_1_v5_gn_2_130181 Lactuca sativa HOM05D003765 ORTHO05D004561 1.1e-63 248.8 664 35.5
THA.LOC104818268 Tarenaya hassleriana HOM05D003765 ORTHO05D004561 1.9e-63 248.1 682 35.0
Lj5g0012460 Lotus japonicus HOM05D003765 ORTHO05D004561 2.5e-63 247.7 674 36.8
MSTRG.114 Avicennia marina HOM05D003765 ORTHO05D004561 2.8e-62 244.2 717 34.2
BraA06t25836Z Brassica rapa HOM05D003765 ORTHO05D004561 9.9e-60 235.7 696 36.9
Sp2g25350 Schrenkiella parvula HOM05D003765 ORTHO05D004561 1.3e-59 235.3 687 35.5
A06p28880 Brassica napus HOM05D003765 ORTHO05D004561 1.7e-59 235.0 693 37.4
Lalb_Chr21g0304901 Lupinus albus HOM05D003765 ORTHO05D004561 3.7e-59 233.8 723 35.5
EL10Ac3g05741 Beta vulgaris HOM05D003765 ORTHO05D004561 8.3e-59 232.6 698 35.4
BolC3t18736H Brassica oleracea HOM05D003765 ORTHO05D004561 8.3e-59 232.6 691 36.9
COL.COLO4_14229 Corchorus olitorius HOM05D003765 ORTHO05D004561 1.4e-58 231.9 725 35.0
TPR.G17415 Trifolium pratense HOM05D003765 ORTHO05D004561 1.9e-58 231.5 707 36.4
Thhalv10003732m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 5.4e-58 229.9 700 37.4
Medtr1g101910 Medicago truncatula HOM05D003765 ORTHO05D004561 1.2e-57 228.8 695 35.3
Aqoxy7G00497 Aquilegia oxysepala HOM05D003765 ORTHO05D004561 2.7e-57 227.6 728 33.9
PGR042G0955 Punica granatum HOM05D003765 ORTHO05D004561 4.6e-57 226.9 715 35.0
Carub.0008s2285 Capsella rubella HOM05D003765 ORTHO05D004561 6.0e-57 226.5 716 34.8
HanXRQChr14g0461811 Helianthus annuus HOM05D003765 ORTHO05D004561 1.3e-56 225.3 645 35.2
Lalb_Chr02g0140881 Lupinus albus HOM05D003765 ORTHO05D004561 1.5e-55 221.9 703 35.4
Lsat_1_v5_gn_9_53700 Lactuca sativa HOM05D003765 ORTHO05D004561 4.3e-55 220.3 667 34.9
Hma1.2p1_0488F.1_g163950 Hydrangea macrophylla HOM05D003765 ORTHO05D004561 3.6e-54 217.2 583 36.9
TPR.G21305 Trifolium pratense HOM05D003765 ORTHO05D004561 1.8e-53 214.9 711 32.3
Psat1g111440 Pisum sativum HOM05D003765 ORTHO05D004561 4.0e-53 213.8 683 35.3
AL8G38980 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 8.9e-53 212.6 713 36.2
DCAR_014604 Daucus carota HOM05D003765 ORTHO05D004561 5.8e-52 209.9 697 32.6
Migut.F01159 Erythranthe guttata HOM05D003765 ORTHO05D004561 5.8e-52 209.9 691 35.3
DCAR_009410 Daucus carota HOM05D003765 ORTHO05D004561 1.3e-51 208.8 622 35.9
Ca_10812_v3 Cicer arietinum L. HOM05D003765 ORTHO05D004561 1.4e-50 205.3 702 33.3
Psat6g201640 Pisum sativum HOM05D003765 ORTHO05D004561 1.4e-50 205.3 655 34.8
CDE04G3755 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 1.9e-50 204.9 723 30.4
CARHR275960 Cardamine hirsuta HOM05D003765 ORTHO05D004561 3.5e-49 200.7 693 35.1
Sc19g0001750 Simmondsia chinensis HOM05D003765 ORTHO05D004561 1.7e-48 198.4 635 32.3
MBI04_g06623_MAGBIO Magnolia biondii HOM05D003765 ORTHO05D004561 2.3e-48 198.0 585 33.3
ECA238G0747 Erigeron canadensis HOM05D003765 ORTHO05D004561 5.1e-48 196.8 704 33.5
arahy.Tifrunner.gnm1.ann1.G7HECD Arachis hypogaea HOM05D003765 ORTHO05D004561 4.3e-47 193.7 649 34.4
C03p64740 Brassica napus HOM05D003765 ORTHO05D004561 5.6e-47 193.4 573 34.2
PSO478G3102 Papaver somniferum HOM05D003765 ORTHO05D004561 5.6e-47 193.4 708 30.9
Ah.07g208800 Amaranthus hybridus HOM05D003765 ORTHO05D004561 2.1e-46 191.4 681 32.9
arahy.Tifrunner.gnm1.ann1.S2H83J Arachis hypogaea HOM05D003765 ORTHO05D004561 3.6e-46 190.7 691 32.9
PSO782G0143 Papaver somniferum HOM05D003765 ORTHO05D004561 5.3e-45 186.8 706 31.2
ECA232G3914 Erigeron canadensis HOM05D003765 ORTHO05D004561 1.5e-44 185.3 621 32.9
AT5G62170 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 7.6e-44 183.0 594 34.2
Medtr6g089530 Medicago truncatula HOM05D003765 ORTHO05D004561 1.7e-43 181.8 720 31.1
CDE07G1851 Ceratophyllum demersum HOM05D003765 ORTHO05D004561 3.8e-43 180.6 727 29.6
AUR62016059 Chenopodium quinoa HOM05D003765 ORTHO05D004561 1.4e-42 178.7 581 33.4
Aa31LG11G1410 Aethionema arabicum HOM05D003765 ORTHO05D004561 3.2e-42 177.6 683 31.6
Aa31LG3G8290 Aethionema arabicum HOM05D003765 ORTHO05D004561 2.3e-40 171.4 657 31.8
VMungo0464G1637 Vigna mungo HOM05D003765 ORTHO05D004561 5.1e-40 170.2 284 45.8
Thhalv10012958m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 8.7e-40 169.5 620 31.0
Sp6g14100 Schrenkiella parvula HOM05D003765 ORTHO05D004561 2.5e-39 167.9 650 31.8
SalBow4G0450 Salvia bowleyana HOM05D003765 ORTHO05D004561 3.3e-39 167.5 608 34.0
AL8G26150 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 2.1e-38 164.9 626 31.8
AT5G51850 Arabidopsis thaliana HOM05D003765 ORTHO05D004561 4.5e-36 157.1 616 31.5
ClCG05G007700 Citrullus lanatus HOM05D003765 ORTHO05D004561 1.7e-35 155.2 672 32.1
AUR62021267 Chenopodium quinoa HOM05D003765 ORTHO05D004561 2.9e-35 154.5 419 35.8
CARHR264740 Cardamine hirsuta HOM05D003765 ORTHO05D004561 1.4e-34 152.1 605 31.4
SGA_v2.0_scaffold113G31787 Striga asiatica HOM05D003765 ORTHO05D004561 1.9e-31 141.7 614 29.6
Sed0025435 Sechium edule HOM05D003765 ORTHO05D004561 8.1e-30 136.3 615 31.4
CsaV3_3G016640 Cucumis sativus L. HOM05D003765 ORTHO05D004561 2.4e-29 134.8 632 30.1
Thhalv10025080m.g Eutrema salsugineum HOM05D003765 ORTHO05D004561 5.3e-29 133.7 432 34.3
MELO3C006859.2 Cucumis melo HOM05D003765 ORTHO05D004561 9.0e-29 132.9 671 28.9
A10p09680 Brassica napus HOM05D003765 ORTHO05D004561 2.6e-28 131.3 420 34.3
BraA10t43049Z Brassica rapa HOM05D003765 ORTHO05D004561 2.6e-28 131.3 420 34.3
BcaB02g09632 Brassica carinata HOM05D003765 ORTHO05D004561 1.4e-26 125.6 604 30.0
Lalb_Chr19g0131131 Lupinus albus HOM05D003765 ORTHO05D004561 2.7e-25 121.3 464 30.2
unitig_37.g11944 Utricularia gibba HOM05D003765 ORTHO05D004561 6.0e-25 120.2 190 49.5
Migut.F00398 Erythranthe guttata HOM05D003765 ORTHO05D004561 1.8e-24 118.6 292 33.9
ClCG01G005340 Citrullus lanatus HOM05D003765 ORTHO05D004561 3.0e-24 117.9 519 30.6
BolC9t57009H Brassica oleracea HOM05D003765 ORTHO05D004561 5.1e-24 117.1 608 29.1
Sed0026899 Sechium edule HOM05D003765 ORTHO05D004561 1.5e-23 115.5 553 28.0
Dinv40025 Davidia involucrata HOM05D003765 ORTHO05D000169 5.6e-23 113.6 152 48.7
C09p41340 Brassica napus HOM05D003765 ORTHO05D004561 4.8e-22 110.5 380 31.6
ATR0661G439 Amborella trichopoda HOM05D003765 ORTHO05D004561 1.8e-21 108.6 765 26.7
BcaB08g35538 Brassica carinata HOM05D003765 ORTHO05D004561 9.0e-21 106.3 437 31.1
A08p21190 Brassica napus HOM05D003765 ORTHO05D004561 9.0e-21 106.3 340 34.4
Carub.0008s1189 Capsella rubella HOM05D003765 ORTHO05D004561 9.0e-21 106.3 504 29.6
BcaB03g12466 Brassica carinata HOM05D003765 ORTHO05D004561 1.5e-20 105.5 518 29.7
HanXRQChr15g0486221 Helianthus annuus HOM05D003765 ORTHO05D004561 2.6e-20 104.8 495 30.1
BraA08t34069Z Brassica rapa HOM05D003765 ORTHO05D004561 3.4e-20 104.4 340 34.1
BolC8t48608H Brassica oleracea HOM05D003765 ORTHO05D004561 4.5e-20 104.0 412 29.6
BcaC07g38188 Brassica carinata HOM05D003765 ORTHO05D004561 8.4e-19 99.8 407 29.5
arahy.Tifrunner.gnm1.ann1.3X1084 Arachis hypogaea HOM05D003765 ORTHO05D004561 3.5e-17 94.4 780 29.0
Sp7g23450 Schrenkiella parvula HOM05D003765 ORTHO05D004561 1.0e-16 92.8 402 30.8
CsaV3_5G005590 Cucumis sativus L. HOM05D003765 ORTHO05D004561 3.9e-16 90.9 250 34.4
AT4G25430 Arabidopsis thaliana HOM05D003765 ORTHO05D023707 4.3e-15 87.4 412 30.6
Dinv28507 Davidia involucrata HOM05D003765 ORTHO05D004561 7.4e-15 86.7 139 41.0
AL7G27690 Arabidopsis lyrata HOM05D003765 ORTHO05D004561 8.2e-14 83.2 190 41.1
Carub.0007s1558 Capsella rubella HOM05D003765 ORTHO05D004561 2.4e-13 81.6 144 47.9
unitig_22.g5225 Utricularia gibba HOM05D003765 ORTHO05D004561 2.4e-13 81.6 553 26.4
Aa31LG6G8690 Aethionema arabicum HOM05D003765 ORTHO05D004561 4.1e-13 80.9 232 35.3
BraA09t36408Z Brassica rapa HOM05D003765 ORTHO05D004561 3.2e-10 71.2 398 26.6
A09p07540 Brassica napus HOM05D003765 ORTHO05D004561 4.2e-10 70.9 405 26.7
BolC9t53753H Brassica oleracea HOM05D003765 ORTHO05D004561 7.2e-10 70.1 474 25.3
arahy.Tifrunner.gnm1.ann1.XAW92V Arachis hypogaea HOM05D003765 ORTHO05D004561 1.6e-09 68.9 784 28.2
Duzib205G0479 Durio zibethinus HOM05D003765 ORTHO05D004561 1.6e-09 68.9 103 40.8
HPP92_022139 Vanilla planifolia HOM05D003765 ORTHO05D004561 1.6e-09 68.9 619 24.1
Lalb_Chr19g0131141 Lupinus albus HOM05D003765 ORTHO05D004561 2.1e-09 68.6 159 33.3
VMungo0251G2630 Vigna mungo HOM05D003765 ORTHO05D004561 6.1e-09 67.0 76 56.6
BcaNung01408 Brassica carinata HOM05D003765 ORTHO05D004561 1.0e-08 66.2 392 26.5
C09p08430 Brassica napus HOM05D003765 ORTHO05D004561 1.8e-08 65.5 484 25.4
VMungo0100G0003 Vigna mungo HOM05D003765 ORTHO05D004561 6.7e-08 63.5 76 52.6
SEGI_17592 Sequoiadendron giganteum HOM05D003765 ORTHO05D004561 1.5e-07 62.4 183 25.7
VMungo0464G2043 Vigna mungo HOM05D003765 ORTHO05D004561 3.3e-07 61.2 216 32.4
HPP92_022144 Vanilla planifolia HOM05D003765 ORTHO05D004561 7.4e-07 60.1 619 23.6
BcaNung01409 Brassica carinata HOM05D003765 ORTHO05D004561 1.3e-06 59.3 474 24.9
Rhsim04G0156800 Rhododendron simsii HOM05D002515 ORTHO05D002722 6.3e-06 57.0 187 30.5
Rhsim04G0157000 Rhododendron simsii HOM05D002515 ORTHO05D002722 6.3e-06 57.0 187 30.5


User provided reference genes

Program Settings