Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01018261001 Vitis vinifera HOM05D002637 ORTHO05D009046 3.4e-96 355.1 196 100.0
GSVIVG01018259001 Vitis vinifera HOM05D002637 ORTHO05D009046 2.2e-39 166.4 117 77.8
vmacro21056 Vaccinium macrocarpon HOM05D002637 ORTHO05D009046 1.1e-30 137.5 160 45.0
Actinidia33504 Actinidia chinensis HOM05D002637 ORTHO05D009046 1.3e-28 130.6 149 43.6
BcaNung05079 Brassica carinata HOM05D002637 ORTHO05D009046 8.7e-28 127.9 150 42.7
Carub.0007s0284 Capsella rubella HOM05D002637 ORTHO05D009046 8.7e-28 127.9 150 42.0
Ciclev10026646m.g Citrus clementina HOM05D002637 ORTHO05D009046 1.9e-27 126.7 150 42.0
CARHR245840 Cardamine hirsuta HOM05D002637 ORTHO05D009046 2.5e-27 126.3 150 42.0
Migut.B01543 Erythranthe guttata HOM05D002637 ORTHO05D009046 3.3e-27 125.9 168 39.9
Thhalv10026444m.g Eutrema salsugineum HOM05D002637 ORTHO05D009046 4.3e-27 125.6 150 42.0
AT4G37445 Arabidopsis thaliana HOM05D002637 ORTHO05D009046 5.6e-27 125.2 150 41.3
BcaNung03660 Brassica carinata HOM05D002637 ORTHO05D009046 7.4e-27 124.8 150 42.0
AL7G13350 Arabidopsis lyrata HOM05D002637 ORTHO05D009046 1.6e-26 123.6 150 40.7
Cc02_g25010 Coffea canephora HOM05D002637 ORTHO05D009046 1.6e-26 123.6 124 50.0
Hund17084 Selenicereus undatus HOM05D002637 ORTHO05D009046 2.1e-26 123.2 120 47.5
PGR042G3993 Punica granatum HOM05D002637 ORTHO05D009046 3.7e-26 122.5 124 47.6
Sp7g35140 Schrenkiella parvula HOM05D002637 ORTHO05D009046 3.7e-26 122.5 150 40.0
Prupe.2G128200 Prunus persica HOM05D002637 ORTHO05D009046 8.2e-26 121.3 124 45.2
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 8.2e-26 121.3 168 39.3
Nn1g00869 Nelumbo nucifera HOM05D002637 ORTHO05D009046 1.4e-25 120.6 136 45.6
Aqoxy3G02748 Aquilegia oxysepala HOM05D002637 ORTHO05D009046 6.9e-25 118.2 153 42.5
Dinv43628 Davidia involucrata HOM05D002637 ORTHO05D009046 6.9e-25 118.2 168 38.1
Potri.007G051200 Populus trichocarpa HOM05D002637 ORTHO05D009046 9.0e-25 117.9 170 36.5
Gorai.011G107300 Gossypium raimondii HOM05D002637 ORTHO05D009046 1.2e-24 117.5 158 38.6
MSTRG.17133 Avicennia marina HOM05D002637 ORTHO05D009046 1.5e-24 117.1 124 43.5
Sc02g0003060 Simmondsia chinensis HOM05D002637 ORTHO05D009046 1.5e-24 117.1 119 47.1
FAN03G2438 Fragaria x ananassa HOM05D002637 ORTHO05D009046 2.0e-24 116.7 121 45.5
BraA01t00144Z Brassica rapa HOM05D002637 ORTHO05D009046 2.6e-24 116.3 162 38.9
COL.COLO4_11517 Corchorus olitorius HOM05D002637 ORTHO05D009046 2.6e-24 116.3 163 37.4
DCAR_029750 Daucus carota HOM05D002637 ORTHO05D000193 2.6e-24 116.3 125 46.4
Duzib187G0274 Durio zibethinus HOM05D002637 ORTHO05D009046 2.6e-24 116.3 148 37.8
Eucgr.E01572 Eucalyptus grandis HOM05D002637 ORTHO05D009046 2.6e-24 116.3 129 44.2
Thecc.01G067000 Theobroma cacao HOM05D002637 ORTHO05D009046 2.6e-24 116.3 153 37.9
C01p01670 Brassica napus HOM05D002637 ORTHO05D009046 3.4e-24 115.9 162 38.9
BolC1t00161H Brassica oleracea HOM05D002637 ORTHO05D009046 3.4e-24 115.9 162 38.9
A01p01510 Brassica napus HOM05D002637 ORTHO05D009046 4.5e-24 115.5 162 38.3
THA.LOC104807614 Tarenaya hassleriana HOM05D002637 ORTHO05D009046 4.5e-24 115.5 155 40.0
ECA234G1562 Erigeron canadensis HOM05D002637 ORTHO05D009046 5.8e-24 115.2 149 38.9
MD07G1105300 Malus domestica HOM05D002637 ORTHO05D009046 5.8e-24 115.2 124 44.4
Manes.12G109800 Manihot esculenta HOM05D002637 ORTHO05D009046 7.6e-24 114.8 124 44.4
Rhsim01G0139600 Rhododendron simsii HOM05D002637 ORTHO05D009046 7.6e-24 114.8 112 44.6
TAR629G0766 Trochodendron aralioides HOM05D002637 ORTHO05D009046 7.6e-24 114.8 155 40.6
Atru.chr3.227 Acer truncatum HOM05D002637 ORTHO05D009046 1.7e-23 113.6 154 39.6
EL10Ac1g00772 Beta vulgaris HOM05D002637 ORTHO05D009046 1.7e-23 113.6 157 40.8
FAN06G2425 Fragaria x ananassa HOM05D000001 ORTHO05D009896 2.9e-23 112.8 119 45.4
Cfa011083 Carpinus fangiana HOM05D002637 ORTHO05D009046 3.8e-23 112.5 169 37.9
Haze_02819 Corylus avellana HOM05D002637 ORTHO05D009046 3.8e-23 112.5 124 45.2
MD07G1104600 Malus domestica HOM05D002637 ORTHO05D009046 3.8e-23 112.5 124 43.5
Oeu063229.1 Olea europaea HOM05D002637 ORTHO05D009046 4.9e-23 112.1 132 42.4
Duzib147G1684 Durio zibethinus HOM05D002637 ORTHO05D009046 6.5e-23 111.7 132 40.9
Psat4g225240 Pisum sativum HOM05D002637 ORTHO05D009046 6.5e-23 111.7 125 40.0
TWI53G0102 Tripterygium wilfordii HOM05D002637 ORTHO05D009046 6.5e-23 111.7 123 43.1
FvH4_7g09940 Fragaria vesca HOM05D002637 ORTHO05D009046 8.4e-23 111.3 119 44.5
FAN06G1198 Fragaria x ananassa HOM05D000001 ORTHO05D009896 8.4e-23 111.3 119 44.5
PSO063G5174 Papaver somniferum HOM05D002637 ORTHO05D009046 1.1e-22 110.9 184 34.2
FAN01G0925 Fragaria x ananassa HOM05D002637 ORTHO05D009046 1.4e-22 110.5 141 40.4
HanXRQChr16g0520331 Helianthus annuus HOM05D002637 ORTHO05D009046 1.4e-22 110.5 149 37.6
QL04p030668 Quercus lobata HOM05D002637 ORTHO05D009046 3.2e-22 109.4 172 37.2
Lsat_1_v5_gn_4_46620 Lactuca sativa HOM05D002637 ORTHO05D009046 7.1e-22 108.2 169 37.9
CANSAT21G1080 Cannabis sativa HOM05D002637 ORTHO05D009046 9.3e-22 107.8 169 40.2
BcaNung02947 Brassica carinata HOM05D002637 ORTHO05D009046 1.2e-21 107.5 143 38.5
Sopen01g036190 Solanum pennellii HOM05D002637 ORTHO05D009046 1.6e-21 107.1 169 36.7
CiPaw.14G021200 Carya illinoinensis HOM05D002637 ORTHO05D009046 2.7e-21 106.3 119 44.5
Sabra07G0045200 Salix brachista HOM05D002328 ORTHO05D002433 2.7e-21 106.3 106 47.2
Medtr8g006765 Medicago truncatula HOM05D002637 ORTHO05D009046 4.6e-21 105.5 126 38.9
Manes.13G115300 Manihot esculenta HOM05D002637 ORTHO05D009046 6.0e-21 105.1 123 44.7
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 7.9e-21 104.8 125 40.8
TAR629G0936 Trochodendron aralioides HOM05D002637 ORTHO05D009046 1.0e-20 104.4 164 36.6
Ca_14060_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 1.3e-20 104.0 125 36.8
Medtr4g094628 Medicago truncatula HOM05D002637 ORTHO05D009046 3.0e-20 102.8 151 36.4
Nitab4.5_0003696g0080 Nicotiana tabacum HOM05D002637 ORTHO05D009046 3.0e-20 102.8 144 41.0
Peaxi162Scf00030g00043 Petunia axillaris HOM05D002637 ORTHO05D009046 3.0e-20 102.8 108 47.2
TPR.G33150 Trifolium pratense HOM05D002637 ORTHO05D009046 3.9e-20 102.4 125 36.8
Lj3g0027924 Lotus japonicus HOM05D002637 ORTHO05D009046 6.7e-20 101.7 125 38.4
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 8.7e-20 101.3 124 39.5
AUR62023418 Chenopodium quinoa HOM05D000001 ORTHO05D009896 1.1e-19 100.9 123 41.5
TPR.G12142 Trifolium pratense HOM05D002637 ORTHO05D009046 1.1e-19 100.9 151 35.1
TAR629G3341 Trochodendron aralioides HOM05D002637 ORTHO05D009046 4.3e-19 99.0 127 38.6
A01p01520 Brassica napus HOM05D002637 ORTHO05D009046 5.7e-19 98.6 135 39.3
BraA01t00145Z Brassica rapa HOM05D002637 ORTHO05D009046 5.7e-19 98.6 135 39.3
Psat3g194760 Pisum sativum HOM05D002637 ORTHO05D009046 7.4e-19 98.2 124 37.9
arahy.Tifrunner.gnm1.ann1.TJ44DN Arachis hypogaea HOM05D002637 ORTHO05D009046 1.6e-18 97.1 147 34.0
Phvul.010G051600 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 2.2e-18 96.7 137 38.0
Ca_24158_v3 Cicer arietinum L. HOM05D002637 ORTHO05D009046 2.8e-18 96.3 109 39.4
Lj7A545G96 Lonicera japonica HOM05D002637 ORTHO05D009046 2.8e-18 96.3 119 40.3
Lj1g0023703 Lotus japonicus HOM05D002637 ORTHO05D009046 2.8e-18 96.3 148 31.8
arahy.Tifrunner.gnm1.ann1.P225XX Arachis hypogaea HOM05D002637 ORTHO05D009046 6.3e-18 95.1 147 33.3
BcaNung03659 Brassica carinata HOM05D002637 ORTHO05D009046 8.2e-18 94.7 94 48.9
AUR62013735 Chenopodium quinoa HOM05D002637 ORTHO05D009046 1.8e-17 93.6 111 42.3
Lalb_Chr13g0290561 Lupinus albus HOM05D002637 ORTHO05D009046 1.8e-17 93.6 125 36.0
RcHm_v2.0_Chr1g0347501 Rosa chinensis HOM05D002637 ORTHO05D009046 2.4e-17 93.2 153 33.3
Ca_14062_v3 Cicer arietinum L. HOM05D000534 ORTHO05D009046 5.3e-17 92.0 109 37.6
Glyma.03G113700 Glycine max HOM05D002637 ORTHO05D009046 2.6e-16 89.7 135 35.6
VMungo0331G2001 Vigna mungo HOM05D002637 ORTHO05D009046 4.5e-16 89.0 127 35.4
BraA01t00146Z Brassica rapa HOM05D002637 ORTHO05D016052 3.8e-15 85.9 95 48.4
Aa31LG6G14300 Aethionema arabicum HOM05D002637 ORTHO05D009046 5.0e-15 85.5 148 33.8
A01p01540 Brassica napus HOM05D002637 ORTHO05D009046 1.4e-14 84.0 100 44.0
Manes.13G115400 Manihot esculenta HOM05D002637 ORTHO05D009046 2.1e-13 80.1 149 33.6
FAN10G0921 Fragaria x ananassa HOM05D002637 ORTHO05D009046 2.7e-13 79.7 120 38.3
Cpa.g.sc6.62 Carica papaya HOM05D003561 ORTHO05D004351 6.1e-13 78.6 83 44.6
HPP92_005363 Vanilla planifolia HOM05D002637 ORTHO05D009046 1.8e-12 77.0 145 31.0
Phvul.008G046000 Phaseolus vulgaris HOM05D002637 ORTHO05D009046 6.7e-12 75.1 101 37.6
CSS0047370 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D009046 1.5e-11 73.9 79 46.8
CDE06G1866 Ceratophyllum demersum HOM05D004124 ORTHO05D004779 1.5e-11 73.9 138 31.2
Glyma.07G113000 Glycine max HOM05D002637 ORTHO05D009046 2.0e-11 73.6 117 34.2
Os02g0126600 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D009046 2.0e-11 73.6 124 33.1
Nitab4.5_0003553g0040 Nicotiana tabacum HOM05D002637 ORTHO05D009046 4.3e-11 72.4 57 63.2
FAN10G1525 Fragaria x ananassa HOM05D002637 ORTHO05D009046 2.8e-10 69.7 104 40.4
SalBow5G5579 Salvia bowleyana HOM05D002637 ORTHO05D009046 6.3e-10 68.6 57 57.9
Atru.chr3.216 Acer truncatum HOM05D002637 ORTHO05D009046 8.2e-10 68.2 65 46.2
RcHm_v2.0_Chr1g0347531 Rosa chinensis HOM05D002637 ORTHO05D009046 8.2e-10 68.2 87 40.2
TPR.G39072 Trifolium pratense HOM05D002637 ORTHO05D009046 3.1e-09 66.2 133 30.1
Prupe.2G128500 Prunus persica HOM05D000001 ORTHO05D009896 6.9e-09 65.1 82 39.0
ATR0057G030 Amborella trichopoda HOM05D002637 ORTHO05D009046 2.2e-07 60.1 121 33.9
VMungo1383G0183 Vigna mungo HOM05D002637 ORTHO05D009046 2.2e-07 60.1 84 34.5


User provided reference genes

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