Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 6.1e-112 407.5 210 100.0
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 1.6e-80 303.1 211 74.9
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 4.7e-80 301.6 211 75.4
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 2.2e-77 292.7 211 73.5
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 2.2e-77 292.7 207 73.9
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 2.1e-75 286.2 213 71.8
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 4.7e-72 275.0 213 68.1
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 2.6e-70 269.2 184 76.1
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 4.4e-70 268.5 183 77.0
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 7.5e-70 267.7 211 68.2
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 1.7e-69 266.5 208 67.3
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 1.4e-68 263.5 182 73.6
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 5.4e-68 261.5 212 67.0
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 1.2e-67 260.4 212 67.0
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 1.2e-67 260.4 209 66.5
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 1.2e-67 260.4 211 67.3
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 4.6e-67 258.5 209 68.4
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 1.3e-66 256.9 200 68.0
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 3.0e-66 255.8 209 65.1
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 8.6e-66 254.2 202 69.3
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 2.5e-65 252.7 212 67.9
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 3.3e-65 252.3 215 66.5
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 4.3e-65 251.9 212 67.5
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 4.3e-65 251.9 211 66.8
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 5.6e-65 251.5 179 73.7
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 7.3e-65 251.1 211 66.8
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 2.1e-64 249.6 210 64.8
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 2.8e-64 249.2 211 65.9
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 3.6e-64 248.8 211 65.9
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 3.6e-64 248.8 211 65.9
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 6.2e-64 248.1 211 68.7
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 8.1e-64 247.7 210 61.4
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 1.1e-63 247.3 210 64.8
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 2.4e-63 246.1 210 64.3
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 3.1e-63 245.7 212 67.5
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 4.0e-63 245.4 210 68.6
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 5.2e-63 245.0 212 66.0
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 2.0e-62 243.0 212 66.5
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 2.0e-62 243.0 210 64.3
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 4.4e-62 241.9 215 62.8
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 7.6e-62 241.1 239 61.5
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 7.6e-62 241.1 213 65.7
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 1.3e-61 240.4 211 65.9
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 1.3e-61 240.4 210 64.3
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 2.9e-61 239.2 210 63.3
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 3.8e-61 238.8 216 63.0
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 4.9e-61 238.4 183 69.9
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 8.4e-61 237.7 210 62.9
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 8.4e-61 237.7 210 63.3
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 1.9e-60 236.5 199 62.8
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 2.4e-60 236.1 185 70.8
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 3.2e-60 235.7 177 72.3
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 4.2e-60 235.3 185 71.4
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 5.4e-60 235.0 211 64.5
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 9.3e-60 234.2 211 64.5
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 1.2e-59 233.8 173 72.3
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 1.6e-59 233.4 211 63.5
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 1.6e-59 233.4 207 61.8
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 2.1e-59 233.0 211 64.0
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 7.8e-59 231.1 205 65.4
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 7.8e-59 231.1 211 64.0
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 1.7e-58 229.9 185 69.2
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.7e-58 229.9 185 69.2
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 5.1e-58 228.4 212 59.9
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 8.7e-58 227.6 185 67.6
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 1.9e-57 226.5 185 68.1
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 9.6e-57 224.2 188 64.9
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 2.1e-56 223.0 186 66.7
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 4.8e-56 221.9 185 66.5
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 6.2e-56 221.5 217 59.0
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 8.1e-56 221.1 181 64.1
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 1.8e-55 219.9 183 65.0
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 3.4e-54 215.7 181 66.9
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 1.7e-53 213.4 181 66.9
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 2.9e-53 212.6 209 58.4
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 4.9e-53 211.8 207 58.9
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 4.2e-52 208.8 201 63.7
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 4.2e-52 208.8 191 59.7
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 5.4e-52 208.4 171 66.1
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 7.1e-52 208.0 173 64.7
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 6.0e-51 204.9 173 66.5
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 6.0e-51 204.9 161 69.6
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 3.0e-50 202.6 138 73.2
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 3.9e-50 202.2 189 57.7
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 3.9e-50 202.2 157 69.4
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 5.1e-50 201.8 157 69.4
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 5.1e-50 201.8 157 69.4
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 5.1e-50 201.8 190 63.2
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 3.3e-49 199.1 191 61.3
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 4.3e-49 198.7 157 68.8
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 4.3e-49 198.7 207 58.0
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 9.6e-49 197.6 143 73.4
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 8.1e-48 194.5 191 60.2
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 9.0e-47 191.0 140 71.4
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 2.0e-46 189.9 140 71.4
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 4.5e-46 188.7 210 52.9
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 2.2e-45 186.4 183 57.9
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 1.2e-43 180.6 190 53.7
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 1.8e-42 176.8 138 68.8
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 1.9e-36 156.8 101 81.2
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 4.6e-35 152.1 139 60.4
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 3.0e-34 149.4 172 48.8
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 2.1e-32 143.3 168 48.8
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 2.2e-29 133.3 134 50.7
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 2.9e-29 132.9 120 60.8
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 6.7e-26 121.7 142 44.4
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 1.5e-25 120.6 111 57.7
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 5.3e-23 112.1 70 82.9
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 6.9e-15 85.1 139 40.3


User provided reference genes

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